SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Xenopus ANatomical entity (XAN): endocardial tube

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   anatomical region [XAO:0003186] <51>(370|484) (374|284|123)
+ + + + 4:   anatomical group [XAO:0003001] <2>(414|530) (418|309|134)
+ + + + 4:   trunk region [XAO:0000054] <1>(215|300) (216|157|82)
+ + + + 4:   organism subdivision [XAO:0003013] <11>(375|498) (381|292|126)
+ + + + 4:   multicellular anatomical structure [XAO:0005002] <4>(436|565) (440|325|142)
+ + + 3:   anatomical system [XAO:0003002] <19>(283|382) (289|204|93)
+ + + 3:   anatomical cluster [XAO:0003160] <43>(92|141) (95|75|38)
+ + + 3:   compound organ [XAO:0003041] <8>(332|444) (336|275|125)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   trunk [XAO:0003025] <10>(214|299) (215|157|82)
+ + 2:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ + 2:   cardiovascular system [XAO:0000100] <13>(18|19) (21|8|4)
+ + 2:   cavitated compound organ [XAO:0003165] <21>(287|395) (292|247|114)
+ + 2:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + 2:   viscus [XAO:0003034] <9>(63|96) (66|45|21)
+ + 2:   embryo [XAO:0000113] <8>(134|185) (134|89|38)
+ 1:   embryonic structure [XAO:0003042] <58>(42|52) (43|27|13)
+ 1:   heart [XAO:0000064] <18>(13|15) (15|6|4)
0:   endocardial tube [XAO:0000337](1|1) (1|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
HMG-box0.0002583Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
HMG-box0.0003265Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
HMG-box0.0001927Direct


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)