SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Xenopus ANatomical entity (XAN): head mesenchyme

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + 4:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ + + + 4:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + + 3:   anatomical region [XAO:0003186] <51>(370|484) (374|284|123)
+ + + 3:   multicellular anatomical structure [XAO:0005002] <4>(436|565) (440|325|142)
+ + 2:   tissue [XAO:0003040] <186>(182|250) (189|130|58)
+ + 2:   organism subdivision [XAO:0003013] <11>(375|498) (381|292|126)
+ + 2:   head region [XAO:0000040] <4>(178|245) (183|137|58)
+ 1:   head [XAO:0003024] <22>(178|244) (183|137|58)
+ 1:   mesenchyme [XAO:0003046] <11>(13|19) (13|6|2)
0:   head mesenchyme [XAO:0004307] <1>(4|5) (4|1|0)
- 1:   periocular mesenchyme [XAO:0005316](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.000000000005555Direct
Cystine-knot cytokines0.00000001734Direct
Snake toxin-like0.0000004715Direct
Phosphoglycerate mutase-like0.00002663Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain0Direct
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain0Direct
Homeodomain0.000000000004754Direct
Transforming growth factor (TGF)-beta0.00000000588Direct
Extracellular domain of cell surface receptors0.0000001228Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.000000000003861Direct
Cystine-knot cytokines0.00000001216Direct
Snake toxin-like0.0000003335Direct
Phosphoglycerate mutase-like0.00001936Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52540,53254
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 53254 - Phosphoglycerate mutase-like
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)