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Xenopus DEvelopment stage (XDE): NF stage 10

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   embryonic stage [XAO:1000012] <6>(41|60) (43|44|18)
+ + 2:   Xenopus developmental stage [XAO:1000000] <6>
+ 1:   gastrula stage [XAO:1000005] <7>(6|9) (6|8|2)
+ 1:   NF stage [XAO:1000094] <68>(436|583) (436|330|141)
0:   NF stage 10 [XAO:1000020](4|4) (4|4|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Hedgehog/DD-peptidase0Direct
Homeodomain-like0.000005366Direct
beta-beta-alpha zinc fingers0.000122Direct
POZ domain0.000518Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Hedgehog (development protein), N-terminal signaling domain0Direct
Pseudouridine synthase II TruB0Direct
Homeodomain0.0000003706Direct
Classic zinc finger, C2H20.000108Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Hedgehog/DD-peptidase0Direct
Homeodomain-like0.000003552Direct
beta-beta-alpha zinc fingers0.00008149Direct
POZ domain0.0003505Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48371,101447
  • 48371 - ARM repeat
  • 101447 - Formin homology 2 domain (FH2 domain)
  • 0Direct
    82895,57424
  • 82895 - TSP-1 type 1 repeat
  • 57424 - LDL receptor-like module
  • 0Direct
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.000001217Direct
    117281,117281
  • 117281 - Kelch motif
  • 117281 - Kelch motif
  • 0.0001953Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57667,57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.00001007Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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