SUPERFAMILY 1.75 HMM library and genome assignments server

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Xenopus DEvelopment stage (XDE): NF stage 10.5

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   embryonic stage [XAO:1000012] <6>(41|60) (43|44|18)
+ + 2:   Xenopus developmental stage [XAO:1000000] <6>
+ 1:   NF stage [XAO:1000094] <68>(436|583) (436|330|141)
+ 1:   gastrula stage [XAO:1000005] <7>(6|9) (6|8|2)
0:   NF stage 10.5 [XAO:1000031](1|1) (1|1|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
FMT C-terminal domain-like0Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
CUT domain0.0009491Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
FMT C-terminal domain-like0Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57603,57603
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 0.0007222Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48065,50729,50044
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 50044 - SH3-domain
  • 0.0009971Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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