SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Xenopus DEvelopment stage (XDE): NF stage 56

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   post-embryonic stage [XAO:1000095] <3>(124|168) (126|89|39)
+ + + 3:   tadpole stage [XAO:1000008] <2>(117|160) (119|85|36)
+ + 2:   metamorphosing tadpole stage [XAO:1000079] <2>(98|138) (100|75|32)
+ + 2:   Xenopus developmental stage [XAO:1000000] <6>
+ 1:   prometamorphosis stage [XAO:1000090] <3>(1|1) (2|1|0)
+ 1:   NF stage [XAO:1000094] <68>(436|583) (436|330|141)
0:   NF stage 56 [XAO:1000068](0|1) (1|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Rhodopsin-like0.0004034Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Family A G protein-coupled receptor-like0.000996Direct


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)