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Xenopus ANatomical entity (XAN): ventricular zone

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   anatomical group [XAO:0003001] <2>(414|530) (418|309|134)
+ + + + 4:   multicellular anatomical structure [XAO:0005002] <4>(436|565) (440|325|142)
+ + + + 4:   anatomical system [XAO:0003002] <19>(283|382) (289|204|93)
+ + + 3:   head region [XAO:0000040] <4>(178|245) (183|137|58)
+ + + 3:   compound organ [XAO:0003041] <8>(332|444) (336|275|125)
+ + + 3:   nervous system [XAO:0000177] <11>(134|201) (141|114|53)
+ + + 3:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + + 3:   organism subdivision [XAO:0003013] <11>(375|498) (381|292|126)
+ + 2:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ + 2:   central nervous system [XAO:0000215] <7>(129|191) (135|108|49)
+ + 2:   Xenopus anatomical entity [XAO:0000000] <9>
+ + 2:   head [XAO:0003024] <22>(178|244) (183|137|58)
+ + 2:   cavitated compound organ [XAO:0003165] <21>(287|395) (292|247|114)
+ 1:   brain [XAO:0000010] <14>(79|120) (80|65|28)
+ 1:   anatomical region [XAO:0003186] <51>(370|484) (374|284|123)
0:   ventricular zone [XAO:0000021](4|3) (4|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
GINS helical bundle-like0.00000002008Direct
Homeodomain-like0.0000003497Direct
HLH, helix-loop-helix DNA-binding domain0.00001601Direct
Intermediate filament protein, coiled coil region0.0006812Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.000001532Direct
HLH, helix-loop-helix DNA-binding domain0.00003283Direct
Intermediate filament protein, coiled coil region0.0009356Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
GINS helical bundle-like0.00000001409Direct
Homeodomain-like0.0000002472Direct
HLH, helix-loop-helix DNA-binding domain0.00001157Direct
Intermediate filament protein, coiled coil region0.0005141Direct


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)