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Xenopus ANatomical entity (XAN): gastrocoel roof plate

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   embryo [XAO:0000113] <8>(134|185) (134|89|38)
+ + + 3:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ + + 3:   primary germ layer [XAO:0003011] <4>(109|155) (109|73|30)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(436|565) (440|325|142)
+ + 2:   anatomical space [XAO:0003190] <22>(19|23) (19|9|5)
+ + 2:   endoderm [XAO:0000090] <16>(14|13) (14|4|0)
+ 1:   archenteron [XAO:0000092] <3>(5|6) (5|2|0)
+ 1:   tissue [XAO:0003040] <186>(182|250) (189|130|58)
0:   gastrocoel roof plate [XAO:0000094] <5>(2|3) (2|1|0)
- 1:   monociliated cell [XAO:0005137] <1>(0|0) (0|0|0)
- 1:   archenteron roof midline [XAO:0005155](0|0) (0|0|0)
- 1:   dorsal endoderm [XAO:0004462](0|0) (0|0|0)
- 1:   left-right organizer [XAO:0005170](0|0) (0|0|0)
- 1:   left-right organizer primordium [XAO:0005169](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Tubulin C-terminal domain-like0.0001147Direct
Tubulin nucleotide-binding domain-like0.0001147Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Tubulin, GTPase domain0.00009612Direct
Tubulin, C-terminal domain0.00009612Direct
Transforming growth factor (TGF)-beta0.0007963Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Tubulin C-terminal domain-like0.00008469Direct
Tubulin nucleotide-binding domain-like0.00008469Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.00008469Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)