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Xenopus ANatomical entity (XAN): tail bud

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ + + 3:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(436|565) (440|325|142)
+ + 2:   anatomical region [XAO:0003186] <51>(370|484) (374|284|123)
+ 1:   tail region [XAO:0000087] <2>(30|42) (30|16|8)
+ 1:   multi-tissue structure [XAO:0003037] <131>(49|63) (53|31|15)
0:   tail bud [XAO:0000107] <3>(7|8) (7|2|1)
- 1:   cloaca [XAO:0000244] <3>(2|2) (2|1|0)
- 1:   neurenteric canal [XAO:0005245] <1>(1|1) (1|0|0)
- 1:   chordoneural hinge [XAO:0000108](4|5) (4|1|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
SMAD MH1 domain0.00001102Direct
Homeodomain-like0.00002591Direct
HLH, helix-loop-helix DNA-binding domain0.0006571Direct
Cytokine0.0009121Direct
Orange domain-like0.001337Inherited
TSP-1 type 1 repeat0.1051Inherited
Metalloproteases ("zincins"), catalytic domain0.1076Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
SMAD MH1 domain0.00001085Direct
Homeodomain0.00006815Direct
SMAD domain0.00007242Direct
Fibroblast growth factors (FGF)0.0004291Direct
HLH, helix-loop-helix DNA-binding domain0.0009348Direct
Hairy Orange domain0.001292Inherited
Forkhead DNA-binding domain0.002497Inherited
TSP-1 type 1 repeat0.1226Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SMAD MH1 domain0.000007945Direct
Homeodomain-like0.00001882Direct
HLH, helix-loop-helix DNA-binding domain0.0004957Direct
Cytokine0.0006914Direct
Orange domain-like0.001018Inherited
TSP-1 type 1 repeat0.08907Inherited
Metalloproteases ("zincins"), catalytic domain0.09135Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.001018Inherited
    82895,82895
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 0.296Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48371,48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.03746Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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