SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Xenopus ANatomical entity (XAN): pancreas

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   anatomical region [XAO:0003186] <51>(370|484) (374|284|123)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + + 3:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ + + 3:   trunk region [XAO:0000054] <1>(215|300) (216|157|82)
+ + + 3:   organism subdivision [XAO:0003013] <11>(375|498) (381|292|126)
+ + + 3:   anatomical group [XAO:0003001] <2>(414|530) (418|309|134)
+ + 2:   anatomical system [XAO:0003002] <19>(283|382) (289|204|93)
+ + 2:   trunk [XAO:0003025] <10>(214|299) (215|157|82)
+ + 2:   anatomical cluster [XAO:0003160] <43>(92|141) (95|75|38)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(436|565) (440|325|142)
+ 1:   compound organ [XAO:0003041] <8>(332|444) (336|275|125)
+ 1:   alimentary system [XAO:0000125] <30>(64|98) (64|46|19)
+ 1:   viscus [XAO:0003034] <9>(63|96) (66|45|21)
0:   pancreas [XAO:0000136] <3>(9|9) (9|7|1)
- 1:   islets of Langerhans [XAO:0000159] <4>(0|0) (0|0|0)
- 1:   acinar cell [XAO:0003233](0|0) (0|0|0)
- 1:   exocrine pancreas [XAO:0000137](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Thiamin diphosphate-binding fold (THDP-binding)0.0000002149Direct
Translation proteins SH3-like domain0.000003231Direct
Zn-binding ribosomal proteins0.00003372Direct
Leukotriene A4 hydrolase N-terminal domain0.00003508Direct
TK C-terminal domain-like0.00009252Direct
Trypsin-like serine proteases0.0001161Direct
MHC antigen-recognition domain0.000418Direct
Actin-like ATPase domain0.0007558Direct
Translational machinery components0.0007864Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Leukotriene A4 hydrolase N-terminal domain0.00001268Direct
Leukotriene A4 hydrolase catalytic domain0.00001268Direct
Eukaryotic proteases0.00002993Direct
Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain0.00007575Direct
Branched-chain alpha-keto acid dehydrogenase PP module0.00007575Direct
Lectin leg-like0.00007575Direct
Actin/HSP700.00009275Direct
Translational machinery components0.0002248Direct
MHC antigen-recognition domain0.0003472Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Thiamin diphosphate-binding fold (THDP-binding)0.0000001517Direct
Translation proteins SH3-like domain0.000002313Direct
Zn-binding ribosomal proteins0.00002458Direct
Leukotriene A4 hydrolase N-terminal domain0.00002558Direct
TK C-terminal domain-like0.00006819Direct
Trypsin-like serine proteases0.00008573Direct
MHC antigen-recognition domain0.0003137Direct
Actin-like ATPase domain0.0005715Direct
Translational machinery components0.0005951Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
63737,55486
  • 63737 - Leukotriene A4 hydrolase N-terminal domain
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.00002558Direct
    103657,50729
  • 103657 - BAR/IMD domain-like
  • 50729 - PH domain-like
  • 0.00004509Direct
    52518,52922
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52922 - TK C-terminal domain-like
  • 0.00006819Direct
    54791,54791
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 0.0001135Direct
    52518,52518
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 52518 - Thiamin diphosphate-binding fold (THDP-binding)
  • 0.0003137Direct
    50494,50494
  • 50494 - Trypsin-like serine proteases
  • 50494 - Trypsin-like serine proteases
  • 0.0003137Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.0009589Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.0007732Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)