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Xenopus ANatomical entity (XAN): vestibuloauditory system

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + + 4:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + + + 4:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ + + 3:   anatomical group [XAO:0003001] <2>(414|530) (418|309|134)
+ + 2:   nervous system [XAO:0000177] <11>(134|201) (141|114|53)
+ + 2:   anatomical system [XAO:0003002] <19>(283|382) (289|204|93)
+ 1:   sensory system [XAO:0003194] <5>(39|51) (43|25|10)
0:   vestibuloauditory system [XAO:0003195] <4>(17|21) (18|8|5)
- 1:   auditory apparatus [XAO:0000189] <5>(1|1) (1|1|1)
- 1:   vestibulocochlear nerve [XAO:0003095] <2>(0|1) (1|0|0)
- 1:   otic placode [XAO:0000223](3|4) (3|1|0)
- 1:   otic vesicle [XAO:0000006](13|14) (13|4|3)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Synuclein0Direct
GINS helical bundle-like0Direct
PriA/YqbF domain0Direct
PLP-binding barrel0Direct
Alanine racemase C-terminal domain-like0Direct
BRK domain-like0.0001327Direct
Frizzled cysteine-rich domain0.000773Direct
Homeodomain-like0.02229Inherited
HLH, helix-loop-helix DNA-binding domain0.03748Inherited
HMG-box0.03921Inherited
SMAD MH1 domain0.04502Inherited
Growth factor receptor domain0.06919Inherited
"Winged helix" DNA-binding domain0.1165Inherited
Cytokine0.1236Inherited
Spectrin repeat0.1309Inherited
Sema domain0.5628Inherited
Plexin repeat0.7531Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Alanine racemase-like, N-terminal domain0Direct
Eukaryotic ODC-like0Direct
Synuclein0Direct
L domain0.00001805Direct
Tandem AAA-ATPase domain0.00002424Direct
BRK domain-like0.0001381Direct
Link domain0.0003772Direct
Frizzled cysteine-rich domain0.0007431Direct
ets domain0.01667Inherited
Hypoxia-inducible factor Hif2a, C-terminal domain0.0215Inherited
SMAD domain0.0215Inherited
Homeodomain0.02549Inherited
HMG-box0.03832Inherited
SMAD MH1 domain0.04043Inherited
HLH, helix-loop-helix DNA-binding domain0.04045Inherited
P4 origin-binding domain-like0.07493Inherited
Spectrin repeat0.08509Inherited
Fibroblast growth factors (FGF)0.1696Inherited
Sema domain0.5541Inherited
Plexin repeat0.7439Inherited
Intermediate filament protein, coiled coil region1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
PLP-binding barrel0Direct
Synuclein0Direct
GINS helical bundle-like0Direct
Alanine racemase C-terminal domain-like0Direct
PriA/YqbF domain0Direct
BRK domain-like0.00009819Direct
Frizzled cysteine-rich domain0.0005848Direct
Homeodomain-like0.01773Inherited
HLH, helix-loop-helix DNA-binding domain0.03042Inherited
HMG-box0.03193Inherited
SMAD MH1 domain0.03685Inherited
Growth factor receptor domain0.05749Inherited
"Winged helix" DNA-binding domain0.09951Inherited
Cytokine0.1062Inherited
Spectrin repeat0.1129Inherited
Sema domain0.5264Inherited
Plexin repeat0.7181Inherited
Intermediate filament protein, coiled coil region1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
51419,50621
  • 51419 - PLP-binding barrel
  • 50621 - Alanine racemase C-terminal domain-like
  • 0Direct
    56436,57535
  • 56436 - C-type lectin-like
  • 57535 - Complement control module/SCR domain
  • 0Direct
    48726,56436
  • 48726 - Immunoglobulin
  • 56436 - C-type lectin-like
  • 0Direct
    52058,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.00001186Direct
    57184,52058
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.00001186Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.04155Inherited
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.04742Inherited
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.5264Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0Direct
    48726,56436,56436
  • 48726 - Immunoglobulin
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0Direct
    52058,57184,52058
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.00009819Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.03868Inherited
    50044,55550,56112
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.07321Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)