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Xenopus ANatomical entity (XAN): regenerating tissue

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Xenopus anatomical entity [XAO:0000000] <9>
+ + + 3:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ + + 3:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ + 2:   multicellular anatomical structure [XAO:0005002] <4>(436|565) (440|325|142)
+ 1:   tissue [XAO:0003040] <186>(182|250) (189|130|58)
0:   regenerating tissue [XAO:0004059] <16>(7|8) (7|1|1)
- 1:   blastema [XAO:0004060] <12>(7|8) (7|1|1)
- 1:   regenerating limb [XAO:0004311] <4>(3|4) (3|0|0)
- 1:   wound epidermis [XAO:0004397] <2>(0|1) (0|1|1)
- 1:   regenerating eye [XAO:0004109] <1>(0|0) (0|0|0)
- 1:   apical epithelial cap [XAO:0004401](0|0) (0|0|0)
- 1:   apical mesenchyme [XAO:0004396](0|0) (0|0|0)
- 1:   fibrocellular pad [XAO:0004403](0|0) (0|0|0)
- 1:   pseudoblastema [XAO:0004402](0|0) (0|0|0)
- 1:   regenerating fin [XAO:0004312](0|0) (0|0|0)
- 1:   regenerating lens [XAO:0005240](0|0) (0|0|0)
- 1:   regenerating pelvic girdle [XAO:0005269](0|0) (0|0|0)
- 1:   regenerating tail [XAO:0004108](0|0) (0|0|0)
- 1:   regenerating zeugopod skeleton [XAO:0004400](0|0) (0|0|0)
- 1:   spike [XAO:0004489](0|0) (0|0|0)
- 1:   wound epidermis inner layer [XAO:0004398](0|0) (0|0|0)
- 1:   wound epidermis outer layer [XAO:0004399](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Cystine-knot cytokines0.000001278Direct
Homeodomain-like0.00002784Direct
HLH, helix-loop-helix DNA-binding domain0.00004243Direct
Cytokine0.0005933Direct
Intermediate filament protein, coiled coil region0.0006152Direct
p53-like transcription factors0.0008542Direct
Protein kinase-like (PK-like)0.1558Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.000007122Direct
Transforming growth factor (TGF)-beta0.00004713Direct
HLH, helix-loop-helix DNA-binding domain0.00007031Direct
T-box0.0003648Direct
Fibroblast growth factors (FGF)0.0004995Direct
Intermediate filament protein, coiled coil region0.0007454Direct
I set domains0.04094Inherited
Protein kinases, catalytic subunit0.1568Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Cystine-knot cytokines0.0000009104Direct
Homeodomain-like0.00002025Direct
HLH, helix-loop-helix DNA-binding domain0.00003099Direct
Cytokine0.0004474Direct
Intermediate filament protein, coiled coil region0.0004641Direct
p53-like transcription factors0.0006472Direct
Protein kinase-like (PK-like)0.1357Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.1411Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.05764Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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