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Xenopus ANatomical entity (XAN): cell part

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   Xenopus anatomical entity [XAO:0000000] <9>
+ + 2:   whole organism [XAO:0003004] <12>(461|598) (465|335|145)
+ 1:   anatomical structure [XAO:0003000] <11>(577|733) (577|400|163)
+ 1:   cell [XAO:0003012] <71>(92|101) (93|35|16)
0:   cell part [XAO:0004290] <40>(5|5) (5|2|0)
- 1:   neuron projection [XAO:0005317] <3>(2|3) (2|0|0)
- 1:   actin cytoskeleton [XAO:0005313] <2>(0|0) (0|0|0)
- 1:   centrosome [XAO:0005014] <1>(0|0) (0|0|0)
- 1:   cilium [XAO:0005008] <1>(0|2) (0|0|0)
- 1:   germ plasm [XAO:0000233] <1>(0|0) (0|0|0)
- 1:   microtubule [XAO:0005122] <1>(0|0) (0|0|0)
- 1:   myofibril [XAO:0005311] <1>(0|0) (0|0|0)
- 1:   nucleus [XAO:0005038] <1>(0|0) (0|0|0)
- 1:   oocyte cortex [XAO:0005119] <1>(0|0) (0|0|0)
- 1:   sarcomere [XAO:0005284] <1>(0|0) (0|0|0)
- 1:   M band [XAO:0005312](0|0) (0|0|0)
- 1:   Roux spot [XAO:0005290](0|0) (0|0|0)
- 1:   actin filament [XAO:0005319](0|0) (0|0|0)
- 1:   adherens junction [XAO:0005296](0|0) (0|0|0)
- 1:   apical junction complex [XAO:0005254](0|0) (0|0|0)
- 1:   astrocyte end-foot [XAO:0005132](0|0) (0|0|0)
- 1:   basal body [XAO:0004615](0|0) (0|0|0)
- 1:   centriole [XAO:0005011](0|0) (0|0|0)
- 1:   centromere [XAO:0005013](0|0) (0|0|0)
- 1:   ciliary axoneme [XAO:0004614](0|0) (0|0|0)
- 1:   cortical actin cytoskeleton [XAO:0005318](0|0) (0|0|0)
- 1:   cytoplasm [XAO:0005039](0|0) (0|0|0)
- 1:   endoplasmic reticulum [XAO:0005120](0|0) (0|0|0)
- 1:   equatorial belt [XAO:0000226](0|0) (0|0|0)
- 1:   filopodium [XAO:0005255](0|0) (0|0|0)
- 1:   germinal granule [XAO:0005117](0|0) (0|0|0)
- 1:   growth cone [XAO:0005010](0|0) (0|0|0)
- 1:   kinetochore [XAO:0005012](0|0) (0|0|0)
- 1:   lampbrush chromosome [XAO:0005082](0|0) (0|0|0)
- 1:   mitochondrial cloud [XAO:0000245](0|0) (0|0|0)
- 1:   mitotic spindle [XAO:0005009](0|0) (0|0|0)
- 1:   ooplasm [XAO:0005118](0|0) (0|0|0)
- 1:   plasma membrane [XAO:0005154](1|0) (1|1|0)
- 1:   ring structure [XAO:0004293](0|0) (0|0|0)
- 1:   sperm entry point [XAO:0000274](0|0) (0|0|0)
- 1:   subcortical cytoplasm [XAO:0005138](0|0) (0|0|0)
- 1:   vegetal cortex [XAO:0005123](0|0) (0|0|0)
- 1:   wedge region [XAO:0004292](0|0) (0|0|0)
- 1:   yolk platelet [XAO:0005282](0|0) (0|0|0)
- 1:   zygote cortex [XAO:0004467](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Tubulin C-terminal domain-like0.000000000000004636Direct
Tubulin nucleotide-binding domain-like0.00000000000001081Direct
Voltage-gated potassium channels0.000446Direct
EGF/Laminin0.0427Inherited
POZ domain0.147Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Tubulin, GTPase domain0.00000000000000779Direct
Tubulin, C-terminal domain0.00000000000000779Direct
Enabled/VASP homology 1 domain (EVH1 domain)0.0000991Direct
Tetramerization domain of potassium channels0.0002148Direct
Voltage-gated potassium channels0.002765Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Tubulin C-terminal domain-like0.000000000000003207Direct
Tubulin nucleotide-binding domain-like0.000000000000007481Direct
Voltage-gated potassium channels0.0003352Direct
EGF/Laminin0.03492Inherited
POZ domain0.1276Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.000000000000003207Direct
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.00633Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)