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Xenopus DEvelopment stage (XDE): neurula stage

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   Xenopus developmental stage [XAO:1000000] <6>
+ 1:   embryonic stage [XAO:1000012] <6>(41|60) (43|44|18)
0:   neurula stage [XAO:1000006] <9>(2|4) (3|1|0)
- 1:   NF stage 13 [XAO:1000023](1|1) (1|0|0)
- 1:   NF stage 14 [XAO:1000024](0|0) (0|0|0)
- 1:   NF stage 15 [XAO:1000025](0|1) (0|1|0)
- 1:   NF stage 16 [XAO:1000026](0|0) (0|0|0)
- 1:   NF stage 17 [XAO:1000027](0|0) (0|0|0)
- 1:   NF stage 18 [XAO:1000034](0|0) (0|0|0)
- 1:   NF stage 19 [XAO:1000035](0|0) (0|0|0)
- 1:   NF stage 20 [XAO:1000036](1|1) (1|0|0)
- 1:   NF stage 21 [XAO:1000037](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.0003251Direct
Acid phosphatase/Vanadium-dependent haloperoxidase0.001554Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.00002547Direct
28-residue LRR0.0001472Direct
Toll/Interleukin receptor TIR domain0.0003252Direct
Tetramerization domain of potassium channels0.2417Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.0002179Direct
Toll/Interleukin receptor TIR domain0.0008942Direct
Acid phosphatase/Vanadium-dependent haloperoxidase0.001064Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55486,82895
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 82895 - TSP-1 type 1 repeat
  • 0.0441Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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