SUPERFAMILY 1.75 HMM library and genome assignments server

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Xenopus DEvelopment stage (XDE): NF stage 47

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   post-embryonic stage [XAO:1000095] <3>(124|168) (126|89|39)
+ + 2:   tadpole stage [XAO:1000008] <2>(117|160) (119|85|36)
+ + 2:   Xenopus developmental stage [XAO:1000000] <6>
+ 1:   premetamorphosis stage [XAO:1000089] <10>(6|7) (6|3|1)
+ 1:   NF stage [XAO:1000094] <68>(436|583) (436|330|141)
0:   NF stage 47 [XAO:1000059](1|1) (1|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.0005805Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain0.0003978Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.0003942Direct


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)