Yeast Phenotype (YP): utilization of nitrogen source

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Root: YP Hierarchy (yeast phenotype from Ascomycete phenotype ontology)

Shortest distance to current term (+ for parents, - for children)	YP term [YP ID] <#Children>	(#SF|#FA)	#Supra-domain (Single|Duplex|Triple)
+ + + 3:	observable [APO:0000017] <7>
+ + 2:	metabolism and growth [APO:0000094] <13>	(76|72)	(77|35|7)
+ 1:	nutrient utilization [APO:0000096] <9>	(21|18)	(21|8|1)
0:	utilization of nitrogen source [APO:0000099]	(7|5)	(7|2|0)

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Superfamily

Superfamily domains annotated to this YP term (SDYP level: Informative)
Highlighted in gray are those with FDR_all>0.001

SCOP term	FDR (all)	Annotation (direct or inherited)
Tryptophan synthase beta subunit-like PLP-dependent enzymes	0.0000008168	DIRECT
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	0.0003477	DIRECT
NAD(P)-binding Rossmann-fold domains	0.0003566	DIRECT
PreATP-grasp domain	0.0005799	DIRECT
TK C-terminal domain-like	0.0005799	DIRECT
SAICAR synthase-like	0.0005799	DIRECT
Glutathione synthetase ATP-binding domain-like	0.0006524	DIRECT

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Family

Family domains annotated to this YP term (SDYP level: Informative)
Highlighted in gray are those with FDR_all>0.001

SCOP term	FDR (all)	Annotation (direct or inherited)
Tryptophan synthase beta subunit-like PLP-dependent enzymes	0.000001373	DIRECT
Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain	0.0004228	DIRECT
Class I glutamine amidotransferases (GAT)	0.0006139	DIRECT
BC ATP-binding domain-like	0.000636	DIRECT
BC N-terminal domain-like	0.000636	DIRECT

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Supra-domain (including individual superfamily)

Supra-domains annotated to this YP term (SPYP level: Informative)
Highlighted in gray are those with FDR>0.001

Supra-domain (Single)	FDR (all)	Annotation (direct or inherited)
Tryptophan synthase beta subunit-like PLP-dependent enzymes	0.0000006659	DIRECT
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	0.0002866	DIRECT
NAD(P)-binding Rossmann-fold domains	0.0002942	DIRECT
PreATP-grasp domain	0.0004797	DIRECT
SAICAR synthase-like	0.0004797	DIRECT
TK C-terminal domain-like	0.0004797	DIRECT
Glutathione synthetase ATP-binding domain-like	0.0005403	DIRECT

Supra-domains annotated to this YP term (SPYP level: Informative)
Highlighted in gray are those with FDR>0.001

Supra-domain (Duplex) in N- to C-terminal order	FDR (all)	Annotation (direct or inherited)
51735,55347 51735 - NAD(P)-binding Rossmann-fold domains 55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	0.0002866	DIRECT
52440,56059 52440 - PreATP-grasp domain 56059 - Glutathione synthetase ATP-binding domain-like	0.0004797	DIRECT