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Zebrafish Anatomy (ZA): spinal cord

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + + + 4:   anatomical group [ZFA:0001512] <5>(178|208) (181|127|60)
+ + + 3:   whole organism [ZFA:0001094] <8>(272|295) (272|155|71)
+ + + 3:   anatomical structure [ZFA:0000037] <16>(275|296) (275|157|73)
+ + + 3:   anatomical system [ZFA:0001439] <18>(164|193) (168|119|58)
+ + 2:   nervous system [ZFA:0000396] <9>(56|58) (60|32|17)
+ + 2:   compound organ [ZFA:0000496] <12>(96|110) (100|69|30)
+ 1:   cavitated compound organ [ZFA:0001490] <15>(78|91) (80|55|22)
+ 1:   central nervous system [ZFA:0000012] <10>(27|27) (30|13|9)
0:   spinal cord [ZFA:0000075] <12>(3|2) (4|1|0)
- 1:   spinal cord interneuron [ZFA:0000778] <11>(2|1) (2|1|0)
- 1:   spinal nerve root [ZFA:0005578] <2>(0|0) (0|0|0)
- 1:   central canal [ZFA:0000938] <1>(1|1) (1|0|0)
- 1:   dorsal funiculus [ZFA:0000501](0|0) (0|0|0)
- 1:   dorsal horn spinal cord [ZFA:0000649](0|0) (0|0|0)
- 1:   floor plate spinal cord region [ZFA:0000890](0|0) (0|0|0)
- 1:   lateral funiculus [ZFA:0000533](0|0) (0|0|0)
- 1:   lateral wall spinal cord [ZFA:0000996](0|0) (0|0|0)
- 1:   roof plate spinal cord region [ZFA:0001177](0|0) (0|0|0)
- 1:   spinal neuromere [ZFA:0001332](0|0) (0|0|0)
- 1:   ventral funiculus [ZFA:0000605](0|0) (0|0|0)
- 1:   ventral horn spinal cord [ZFA:0000702](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
PDZ domain-like0.006205Inherited
HLH, helix-loop-helix DNA-binding domain0.3224Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.4287Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
PDZ domain0.003708Inherited
HLH, helix-loop-helix DNA-binding domain0.3031Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Neurotransmitter-gated ion-channel transmembrane pore0.0009558Direct
PDZ domain-like0.004083Inherited
HLH, helix-loop-helix DNA-binding domain0.2887Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.394Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.04325Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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