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Zebrafish Anatomy (ZA): skeletal system

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + + 3:   anatomical structure [ZFA:0000037] <16>(275|296) (275|157|73)
+ + 2:   anatomical group [ZFA:0001512] <5>(178|208) (181|127|60)
+ + 2:   whole organism [ZFA:0001094] <8>(272|295) (272|155|71)
+ 1:   anatomical system [ZFA:0001439] <18>(164|193) (168|119|58)
0:   skeletal system [ZFA:0000434] <6>(8|9) (10|4|3)
- 1:   joint [ZFA:0001596] <35>(0|0) (0|0|0)
- 1:   cranium [ZFA:0000737] <11>(5|6) (7|1|1)
- 1:   skeletal element [ZFA:0005494] <6>(6|6) (8|2|3)
- 1:   postcranial axial skeleton [ZFA:0000317] <5>(0|1) (0|0|0)
- 1:   skeletal tissue [ZFA:0005619] <5>(0|0) (0|0|0)
- 1:   paired fin skeleton [ZFA:0000027] <3>(0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
FnI-like domain0.00001235Direct
Hemopexin-like domain0.0003478Direct
PGBD-like0.0003478Direct
Cysteine proteinases0.0008848Direct
Cytokine0.007094Inherited
Growth factor receptor domain0.01883Inherited
Alkaline phosphatase-like0.02469Inherited
Multidrug efflux transporter AcrB transmembrane domain0.06334Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
RUNT domain0Direct
MMP N-terminal domain0.0002624Direct
Hemopexin-like domain0.0002624Direct
Ubiquitin carboxyl-terminal hydrolase, UCH0.001384Inherited
Fibroblast growth factors (FGF)0.005686Inherited
VWC domain0.009509Inherited
Multidrug efflux transporter AcrB transmembrane domain0.01417Inherited
Zf-UBP0.02775Inherited
HMG-box0.1395Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
FnI-like domain0.000007051Direct
Hemopexin-like domain0.000207Direct
PGBD-like0.000207Direct
Cysteine proteinases0.0005398Direct
Cytokine0.004707Inherited
Growth factor receptor domain0.01323Inherited
Alkaline phosphatase-like0.01763Inherited
Multidrug efflux transporter AcrB transmembrane domain0.04833Inherited
HMG-box0.1239Inherited
UBA-like0.2291Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57184,57603
  • 57184 - Growth factor receptor domain
  • 57603 - FnI-like domain
  • 0Direct
    47090,55486
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.000207Direct
    69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.01221Inherited
    69318,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 0.01221Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57184,57196
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0.01221Inherited
    69318,69179,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.01221Inherited
    69179,69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.01221Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)