SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Zebrafish Anatomy (ZA): retinal outer plexiform layer

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   whole organism [ZFA:0001094] <8>(272|295) (272|155|71)
+ + + + + + + 7:   anatomical system [ZFA:0001439] <18>(164|193) (168|119|58)
+ + + + + + + 7:   nervous system [ZFA:0000396] <9>(56|58) (60|32|17)
+ + + + + + 6:   compound organ [ZFA:0000496] <12>(96|110) (100|69|30)
+ + + + + + 6:   organism subdivision [ZFA:0001308] <10>(65|72) (71|48|27)
+ + + + + + 6:   sensory system [ZFA:0000282] <5>(22|23) (22|12|6)
+ + + + + 5:   cavitated compound organ [ZFA:0001490] <15>(78|91) (80|55|22)
+ + + + + 5:   anatomical group [ZFA:0001512] <5>(178|208) (181|127|60)
+ + + + + 5:   visual system [ZFA:0001127] <2>(9|14) (9|9|5)
+ + + + + 5:   head [ZFA:0001114] <15>(27|34) (30|18|15)
+ + + + 4:   eye [ZFA:0000107] <10>(9|14) (9|9|5)
+ + + + 4:   anatomical cluster [ZFA:0001478] <54>(36|54) (40|27|20)
+ + + 3:   posterior segment eye [ZFA:0005567] <3>(5|6) (5|4|3)
+ + + 3:   multi-tissue structure [ZFA:0001488] <202>(69|77) (72|47|23)
+ + + 3:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + 2:   retina [ZFA:0000152] <4>(5|6) (5|4|3)
+ + 2:   anatomical structure [ZFA:0000037] <16>(275|296) (275|157|73)
+ 1:   portion of tissue [ZFA:0001477] <232>(42|51) (48|34|23)
+ 1:   retinal neural layer [ZFA:0000046] <9>(3|4) (3|2|1)
0:   retinal outer plexiform layer [ZFA:0001330](1|0) (1|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
NAD(P)-binding Rossmann-fold domains0.0001411Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(
show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
NAD(P)-binding Rossmann-fold domains0.00008232Direct


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)