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  Home > Phenotype Ontology > multi-tissue structure

Zebrafish Anatomy (ZA): multi-tissue structure

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   zebrafish anatomical entity [ZFA:0100000] <6>
+ 1:   anatomical structure [ZFA:0000037] <16>(275|296) (275|157|73)
0:   multi-tissue structure [ZFA:0001488] <202>(69|77) (72|47|23)
- 1:   diencephalic nucleus [ZFA:0001659] <37>(0|0) (0|0|0)
- 1:   medulla oblongata [ZFA:0000545] <33>(0|0) (0|0|0)
- 1:   olfactory bulb glomerulus [ZFA:0005661] <29>(1|0) (1|0|0)
- 1:   lymph vessel [ZFA:0005844] <23>(2|1) (2|2|0)
- 1:   white matter [ZFA:0001682] <23>(4|3) (4|3|3)
- 1:   duct [ZFA:0005171] <20>(1|0) (1|0|0)
- 1:   diencephalon [ZFA:0000101] <17>(8|10) (10|4|3)
- 1:   midbrain [ZFA:0000128] <17>(5|1) (5|2|1)
- 1:   vasculature [ZFA:0005249] <15>(12|10) (14|9|5)
- 1:   hindbrain [ZFA:0000029] <14>(1|1) (1|1|1)
- 1:   blood vessel [ZFA:0005314] <13>(6|7) (8|4|1)
- 1:   lateral zone olfactory bulb [ZFA:0005675] <12>(0|0) (0|0|0)
- 1:   tegmentum [ZFA:0000160] <12>(0|0) (0|0|0)
- 1:   sensory canal [ZFA:0005443] <11>(0|0) (0|0|0)
- 1:   caudal tuberculum [ZFA:0000633] <10>(0|0) (0|0|0)
- 1:   ovarian follicle [ZFA:0001110] <10>(1|2) (2|0|0)
- 1:   telencephalon [ZFA:0000079] <10>(2|2) (3|0|0)
- 1:   floor plate [ZFA:0000022] <9>(2|3) (3|0|0)
- 1:   ventromedial zone olfactory bulb [ZFA:0005679] <9>(0|0) (0|0|0)
- 1:   floor plate rhombomere region [ZFA:0001258] <8>(0|0) (0|0|0)
- 1:   medial zone olfactory bulb [ZFA:0005676] <8>(0|0) (0|0|0)
- 1:   pharynx [ZFA:0000056] <8>(1|3) (3|0|0)
- 1:   valvula cerebelli [ZFA:0000603] <8>(0|0) (0|0|0)
- 1:   cerebellum [ZFA:0000100] <7>(0|0) (0|0|0)
- 1:   dorsal telencephalon [ZFA:0000505] <7>(0|1) (1|0|0)
- 1:   glomerular layer [ZFA:0000357] <7>(2|1) (2|0|0)
- 1:   optic tectum [ZFA:0000445] <7>(5|1) (5|2|1)
- 1:   central zone olfactory bulb [ZFA:0005673] <6>(0|0) (0|0|0)
- 1:   ceratobranchial 5 tooth [ZFA:0000694] <6>(0|0) (0|0|0)
- 1:   forebrain [ZFA:0000109] <6>(9|10) (10|4|3)
- 1:   mediodorsal zone of the olfactory bulb [ZFA:0005682] <6>(0|0) (0|0|0)
- 1:   pharyngeal arch [ZFA:0001306] <6>(5|6) (6|2|1)
- 1:   brainstem [ZFA:0001707] <5>(2|2) (2|2|2)
- 1:   cornea [ZFA:0000640] <5>(0|0) (0|0|0)
- 1:   corpus cerebelli [ZFA:0000188] <5>(0|0) (0|0|0)
- 1:   dermis [ZFA:0001119] <5>(2|1) (3|0|0)
- 1:   dorsolateral zone olfactory bulb [ZFA:0005678] <5>(0|0) (0|0|0)
- 1:   immature eye [ZFA:0001678] <5>(0|1) (0|0|0)
- 1:   olfactory bulb [ZFA:0000402] <5>(2|1) (2|0|0)
- 1:   renal corpuscle [ZFA:0005281] <5>(0|1) (0|0|0)
- 1:   roof plate [ZFA:0007058] <5>(0|0) (0|0|0)
- 1:   synencephalon [ZFA:0000293] <5>(1|2) (2|2|2)
- 1:   tectal neuropile [ZFA:0005907] <5>(0|0) (0|0|0)
- 1:   ventral thalamus [ZFA:0000458] <5>(1|1) (1|1|0)
- 1:   bulbus arteriosus [ZFA:0000173] <4>(0|0) (0|0|0)
- 1:   central pretectum [ZFA:0000183] <4>(0|0) (0|0|0)
- 1:   dental organ [ZFA:0005138] <4>(0|0) (0|0|0)
- 1:   hypothalamus [ZFA:0000032] <4>(0|0) (0|0|0)
- 1:   iris [ZFA:0001238] <4>(0|0) (0|0|0)
- 1:   maxillary barbel [ZFA:0005408] <4>(0|0) (0|0|0)
- 1:   olfactory bulb protoglomerulus [ZFA:0005668] <4>(0|0) (0|0|0)
- 1:   preoptic area [ZFA:0000470] <4>(1|1) (1|0|0)
- 1:   retina [ZFA:0000152] <4>(5|6) (5|4|3)
- 1:   serous membrane [ZFA:0005425] <4>(1|2) (1|0|0)
- 1:   third ventricle [ZFA:0000161] <4>(0|0) (0|0|0)
- 1:   atrioventricular canal [ZFA:0001315] <3>(0|1) (0|0|0)
- 1:   cloaca [ZFA:0005781] <3>(0|0) (0|0|0)
- 1:   dorsal thalamus [ZFA:0000653] <3>(0|0) (0|0|0)
- 1:   epithalamus [ZFA:0000509] <3>(0|1) (1|0|0)
- 1:   esophagus [ZFA:0000204] <3>(0|0) (0|0|0)
- 1:   heart valve [ZFA:0005065] <3>(0|0) (0|0|0)
- 1:   optic cup [ZFA:0001202] <3>(0|0) (0|0|0)
- 1:   pretectum [ZFA:0000418] <3>(0|0) (0|0|0)
- 1:   primitive heart tube [ZFA:0000149] <3>(0|0) (0|0|0)
- 1:   pronephric glomerulus [ZFA:0001557] <3>(1|2) (1|0|0)
- 1:   renal glomerulus [ZFA:0001288] <3>(0|0) (0|0|0)
- 1:   seminiferous tubule [ZFA:0005879] <3>(0|0) (0|0|0)
- 1:   superficial pretectum [ZFA:0000687] <3>(0|0) (0|0|0)
- 1:   thalamus [ZFA:0001215] <3>(1|1) (1|1|0)
- 1:   ventral hypothalamic zone [ZFA:0000707] <3>(0|0) (0|0|0)
- 1:   ventral telencephalon [ZFA:0000304] <3>(0|0) (0|0|0)
- 1:   ventral zone olfactory bulb [ZFA:0005677] <3>(0|0) (0|0|0)
- 1:   adenohypophysis [ZFA:0001282] <2>(0|0) (0|0|0)
- 1:   anteromedial zone olfactory bulb [ZFA:0005683] <2>(0|0) (0|0|0)
- 1:   blood sinus [ZFA:0007072] <2>(0|0) (0|0|0)
- 1:   coelom [ZFA:0001438] <2>(0|0) (0|0|0)
- 1:   dorsal hypothalamic zone [ZFA:0000347] <2>(0|0) (0|0|0)
- 1:   dorsal zone olfactory bulb [ZFA:0005674] <2>(0|0) (0|0|0)
- 1:   epiphysis [ZFA:0000019] <2>(0|0) (0|0|0)
- 1:   exocrine pancreas [ZFA:0001249] <2>(0|0) (0|0|0)
- 1:   fourth ventricle [ZFA:0000110] <2>(0|0) (0|0|0)
- 1:   gill lamella [ZFA:0000211] <2>(0|0) (0|0|0)
- 1:   habenula [ZFA:0000213] <2>(0|0) (0|0|0)
- 1:   inferior lobe [ZFA:0000165] <2>(0|0) (0|0|0)
- 1:   intestinal mucosa [ZFA:0005660] <2>(0|0) (0|0|0)
- 1:   lagena [ZFA:0000374] <2>(0|0) (0|0|0)
- 1:   median tuberal portion [ZFA:0000392] <2>(0|0) (0|0|0)
- 1:   pharyngeal pouch [ZFA:0001106] <2>(0|0) (0|0|0)
- 1:   rhombic lip [ZFA:0001440] <2>(0|0) (0|0|0)
- 1:   saccule [ZFA:0000428] <2>(0|0) (0|0|0)
- 1:   spinal nerve root [ZFA:0005578] <2>(0|0) (0|0|0)
- 1:   tectal ventricle [ZFA:0000159] <2>(0|0) (0|0|0)
- 1:   telencephalic ventricle [ZFA:0000696] <2>(0|0) (0|0|0)
- 1:   torus semicircularis [ZFA:0000599] <2>(0|0) (0|0|0)
- 1:   utricle [ZFA:0000700] <2>(0|0) (0|0|0)
- 1:   vagal lobe [ZFA:0000297] <2>(0|0) (0|0|0)
- 1:   ventroposterior zone olfactory bulb [ZFA:0005681] <2>(0|0) (0|0|0)
- 1:   vestibulolateralis lobe [ZFA:0000307] <2>(0|0) (0|0|0)
- 1:   caudal hypothalamic zone [ZFA:0000634] <1>(0|0) (0|0|0)
- 1:   central canal [ZFA:0000938] <1>(1|1) (1|0|0)
- 1:   cerebellar plate [ZFA:0005869] <1>(0|0) (0|0|0)
- 1:   compound organ component [ZFA:0001489] <1>(1|1) (1|0|0)
- 1:   dermal superficial region [ZFA:0001183] <1>(2|1) (3|0|0)
- 1:   dorsal fin fold [ZFA:0000102] <1>(0|0) (0|0|0)
- 1:   interrenal gland [ZFA:0001345] <1>(0|0) (0|0|0)
- 1:   interrenal primordium [ZFA:0001346] <1>(0|0) (0|0|0)
- 1:   intestinal bulb [ZFA:0001076] <1>(0|0) (0|0|0)
- 1:   mid intestine [ZFA:0001323] <1>(0|0) (0|0|0)
- 1:   neurohypophysis [ZFA:0001271] <1>(0|0) (0|0|0)
- 1:   posterior intestine [ZFA:0000706] <1>(0|0) (0|0|0)
- 1:   primitive meninx [ZFA:0001355] <1>(0|0) (0|0|0)
- 1:   sclera [ZFA:0005563] <1>(0|0) (0|0|0)
- 1:   sinus venosus [ZFA:0000154] <1>(1|1) (1|0|0)
- 1:   taste bud [ZFA:0001074] <1>(0|0) (0|0|0)
- 1:   tooth pulp [ZFA:0005141] <1>(0|0) (0|0|0)
- 1:   ventral fin fold [ZFA:0001069] <1>(1|1) (1|0|0)
- 1:   accessory chamber of the maxillary blood sinus [ZFA:0007077](0|0) (0|0|0)
- 1:   anterior chamber swim bladder [ZFA:0001277](0|0) (0|0|0)
- 1:   bulbus arteriosus inner layer [ZFA:0005068](0|0) (0|0|0)
- 1:   bulbus arteriosus middle layer [ZFA:0005067](0|0) (0|0|0)
- 1:   caudal mesencephalo-cerebellar tract [ZFA:0000479](0|0) (0|0|0)
- 1:   central chamber of the maxillary blood sinus [ZFA:0007076](0|0) (0|0|0)
- 1:   central zone of the optic tectum [ZFA:0000327](0|0) (0|0|0)
- 1:   ciliary zone [ZFA:0001203](0|0) (0|0|0)
- 1:   corpus mamillare [ZFA:0000334](0|0) (0|0|0)
- 1:   deep white zone [ZFA:0000494](0|0) (0|0|0)
- 1:   distal bulb of the maxillary blood sinus [ZFA:0007075](0|0) (0|0|0)
- 1:   dorsal funiculus [ZFA:0000501](0|0) (0|0|0)
- 1:   dorsal horn spinal cord [ZFA:0000649](0|0) (0|0|0)
- 1:   dorsal periventricular hypothalamus [ZFA:0000199](0|0) (0|0|0)
- 1:   fin fold pectoral fin bud [ZFA:0005316](0|0) (0|0|0)
- 1:   floor plate diencephalic region [ZFA:0000871](0|0) (0|0|0)
- 1:   floor plate midbrain region [ZFA:0001677](0|0) (0|0|0)
- 1:   floor plate neural rod [ZFA:0000887](0|0) (0|0|0)
- 1:   floor plate neural tube [ZFA:0001434](0|0) (0|0|0)
- 1:   floor plate rhombomere 1 [ZFA:0000882](0|0) (0|0|0)
- 1:   floor plate rhombomere 2 [ZFA:0000763](0|0) (0|0|0)
- 1:   floor plate rhombomere 3 [ZFA:0000888](0|0) (0|0|0)
- 1:   floor plate rhombomere 4 [ZFA:0000893](0|0) (0|0|0)
- 1:   floor plate rhombomere 5 [ZFA:0000764](0|0) (0|0|0)
- 1:   floor plate rhombomere 6 [ZFA:0000889](0|0) (0|0|0)
- 1:   floor plate rhombomere 7 [ZFA:0000904](0|0) (0|0|0)
- 1:   floor plate rhombomere 8 [ZFA:0000765](0|0) (0|0|0)
- 1:   floor plate spinal cord region [ZFA:0000890](0|0) (0|0|0)
- 1:   floor plate telencephalic region [ZFA:0000914](0|0) (0|0|0)
- 1:   forebrain ventricle [ZFA:0001259](0|0) (0|0|0)
- 1:   glossopharyngeal lobe [ZFA:0000517](0|0) (0|0|0)
- 1:   granular eminence [ZFA:0000212](0|0) (0|0|0)
- 1:   grey matter [ZFA:0001681](0|0) (0|0|0)
- 1:   immature gonad [ZFA:0005272](0|0) (0|0|0)
- 1:   infundibulum [ZFA:0001199](0|0) (0|0|0)
- 1:   intermediate hypothalamus [ZFA:0006000](0|0) (0|0|0)
- 1:   intestinal lamina propria mucosa [ZFA:0005659](0|0) (0|0|0)
- 1:   intestinal rod [ZFA:0005737](0|0) (0|0|0)
- 1:   lGx [ZFA:0005707](0|0) (0|0|0)
- 1:   lateral funiculus [ZFA:0000533](0|0) (0|0|0)
- 1:   lateral valvula cerebelli [ZFA:0000532](0|0) (0|0|0)
- 1:   lateral wall diencephalic region [ZFA:0000780](0|0) (0|0|0)
- 1:   lateral wall midbrain region [ZFA:0000906](0|0) (0|0|0)
- 1:   lateral wall rhombomere 1 [ZFA:0000781](0|0) (0|0|0)
- 1:   lateral wall rhombomere 2 [ZFA:0000907](0|0) (0|0|0)
- 1:   lateral wall rhombomere 3 [ZFA:0000994](0|0) (0|0|0)
- 1:   lateral wall rhombomere 4 [ZFA:0000782](0|0) (0|0|0)
- 1:   lateral wall rhombomere 5 [ZFA:0000908](0|0) (0|0|0)
- 1:   lateral wall rhombomere 6 [ZFA:0000995](0|0) (0|0|0)
- 1:   lateral wall rhombomere 7 [ZFA:0000783](0|0) (0|0|0)
- 1:   lateral wall rhombomere 8 [ZFA:0000909](0|0) (0|0|0)
- 1:   lateral wall spinal cord [ZFA:0000996](0|0) (0|0|0)
- 1:   lateral wall telencephalic region [ZFA:0000785](0|0) (0|0|0)
- 1:   left liver lobe [ZFA:0005172](0|0) (0|0|0)
- 1:   lower rhombic lip [ZFA:0001441](0|0) (0|0|0)
- 1:   maGx [ZFA:0005716](0|0) (0|0|0)
- 1:   medial caudal lobe [ZFA:0000388](0|0) (0|0|0)
- 1:   medial valvula cerebelli [ZFA:0000280](0|0) (0|0|0)
- 1:   mesovarium [ZFA:0000333](0|0) (0|0|0)
- 1:   nasal capsule [ZFA:0005507](0|0) (0|0|0)
- 1:   pectoral fin fold [ZFA:0005317](1|0) (1|0|0)
- 1:   periventricular grey zone [ZFA:0000516](0|0) (0|0|0)
- 1:   posterior chamber swim bladder [ZFA:0001278](0|0) (0|0|0)
- 1:   presumptive atrium heart tube [ZFA:0001718](0|0) (0|0|0)
- 1:   presumptive atrium primitive heart tube [ZFA:0001721](0|0) (0|0|0)
- 1:   presumptive cardiac ventricle heart tube [ZFA:0001719](0|0) (0|0|0)
- 1:   presumptive cardiac ventricle primitive heart tube [ZFA:0001720](0|0) (0|0|0)
- 1:   prootic bulla [ZFA:0005500](0|0) (0|0|0)
- 1:   right liver lobe [ZFA:0005173](0|0) (0|0|0)
- 1:   simple organ [ZFA:0001492](0|0) (0|0|0)
- 1:   spinal neuromere [ZFA:0001332](0|0) (0|0|0)
- 1:   superficial grey and white zone [ZFA:0000686](0|0) (0|0|0)
- 1:   thalamic eminence [ZFA:0007010](0|0) (0|0|0)
- 1:   thecal cell layer [ZFA:0001113](0|0) (0|0|0)
- 1:   tongue [ZFA:0005333](0|0) (0|0|0)
- 1:   torus longitudinalis [ZFA:0000449](0|0) (0|0|0)
- 1:   tunica externa swim bladder [ZFA:0001700](0|0) (0|0|0)
- 1:   tunica interna swim bladder [ZFA:0001701](0|0) (0|0|0)
- 1:   ultimobranchial body [ZFA:0001448](0|0) (0|0|0)
- 1:   upper rhombic lip [ZFA:0001442](0|0) (0|0|0)
- 1:   ventral funiculus [ZFA:0000605](0|0) (0|0|0)
- 1:   ventral horn spinal cord [ZFA:0000702](0|0) (0|0|0)
- 1:   ventral liver lobe [ZFA:0005174](0|0) (0|0|0)
- 1:   ventroanterior zone of olfactory bulb [ZFA:0005680](0|0) (0|0|0)
- 1:   vmGx [ZFA:0005698](0|0) (0|0|0)
- 1:   vmGy [ZFA:0005699](0|0) (0|0|0)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
SMAD MH1 domain0Direct
Moesin tail domain0Direct
ADC-like0Direct
Cap-Gly domain0Direct
HD-domain/PDEase-like0Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0Direct
Caspase-like0Direct
Kazal-type serine protease inhibitors0Direct
Class II aaRS ABD-related0Direct
LDL receptor-like module0Direct
Ferredoxin reductase-like, C-terminal NADP-linked domain0Direct
PP2C-like0Direct
Cdc48 domain 2-like0Direct
Ypt/Rab-GAP domain of gyp1p0Direct
CCHHC domain0Direct
Nuclear receptor coactivator interlocking domain0Direct
LCCL domain0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
BRK domain-like0Direct
Sec7 domain0Direct
Cullin repeat-like0Direct
Polo-box domain0Direct
Arginase/deacetylase0Direct
Metallo-dependent hydrolases0Direct
Aldolase0Direct
Glutathione synthetase ATP-binding domain-like0Direct
CalX-like0Direct
Composite domain of metallo-dependent hydrolases0Direct
Class I glutamine amidotransferase-like0Direct
Doublecortin (DC)0Direct
Hormone receptor domain0Direct
Ras GEF0Direct
Notch domain0Direct
SNARE fusion complex0Direct
Riboflavin synthase domain-like0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
Growth factor receptor domain0.006245Inherited
Homeodomain-like0.006682Inherited
EGF/Laminin0.008381Inherited
Nuclear receptor ligand-binding domain0.02186Inherited
L domain-like0.06648Inherited
Immunoglobulin0.06963Inherited
SMAD/FHA domain0.07731Inherited
Cytochrome P4500.07731Inherited
DEATH domain0.1007Inherited
Fibronectin type III0.1216Inherited
PDZ domain-like0.1774Inherited
lambda repressor-like DNA-binding domains0.2093Inherited
Snake toxin-like0.2093Inherited
Protein kinase-like (PK-like)0.2178Inherited
WD40 repeat-like0.2228Inherited
Class II aaRS and biotin synthetases0.2548Inherited
ACT-like0.2548Inherited
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains0.2548Inherited
Alkaline phosphatase-like0.2548Inherited
Cysteine proteinases0.3224Inherited
Cyclin-like0.3679Inherited
Subtilisin-like0.4051Inherited
FnI-like domain0.4091Inherited
NAD(P)-binding Rossmann-fold domains0.4771Inherited
C-type lectin-like0.5972Inherited
Retrovirus zinc finger-like domains0.6008Inherited
Cadherin-like0.6508Inherited
Nucleotide-diphospho-sugar transferases0.6586Inherited
Protease propeptides/inhibitors0.6912Inherited
Multidrug efflux transporter AcrB transmembrane domain0.6912Inherited
Tropomyosin0.7524Inherited
beta-beta-alpha zinc fingers0.821Inherited
DBL homology domain (DH-domain)0.8354Inherited

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
PWWP domain0Direct
Platelet-derived growth factor-like0Direct
Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A0Direct
Cdc48 domain 2-like0Direct
Hydantoinase (dihydropyrimidinase)0Direct
Sec7 domain0Direct
SNARE fusion complex0Direct
Nitrogenase iron protein-like0Direct
Class I glutamine amidotransferases (GAT)0Direct
CalX-beta domain0Direct
LDL receptor-like module0Direct
Cytoplasmic domain of inward rectifier potassium channel0Direct
V set domains (antibody variable domain-like)0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
Cap-Gly domain0Direct
C5 cytosine-specific DNA methylase, DCM0Direct
Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta0Direct
Histone deacetylase, HDAC0Direct
Noncollagenous (NC1) domain of collagen IV0Direct
Pyridoxal-dependent decarboxylase0Direct
CCHHC domain0Direct
Link domain0Direct
LCCL domain0Direct
Phoshoinositide 3-kinase (PI3K) helical domain0Direct
Anticodon-binding domain of Class II aaRS0Direct
Reprolysin-like0Direct
Doublecortin (DC)0Direct
Extracellular domain of cell surface receptors0Direct
SMAD MH1 domain0Direct
Hormone receptor domain0Direct
SMAD domain0Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0Direct
Nuclear receptor coactivator interlocking domain0Direct
Hydantoinase (dihydropyrimidinase), catalytic domain0Direct
Glycerophosphoryl diester phosphodiesterase0Direct
Moesin tail domain0Direct
Erythroid transcription factor GATA-10Direct
Tetramerization domain of potassium channels0Direct
Long-chain cytokines0Direct
Myotubularin-like phosphatases0Direct
Caspase catalytic domain0Direct
Cell cycle transcription factor e2f-dp0Direct
PP2C-like0Direct
Notch domain0Direct
Ras GEF0Direct
Cdc48 N-terminal domain-like0Direct
Rel/Dorsal transcription factors, DNA-binding domain0Direct
Ovomucoid domain III-like0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
BRK domain-like0Direct
Homeodomain0.0007628Direct
Nuclear receptor ligand-binding domain0.01758Inherited
Nuclear receptor0.02303Inherited
I set domains0.02583Inherited
Cytochrome P4500.06641Inherited
PDZ domain0.07545Inherited
Zf-UBP0.08981Inherited
Ubiquitin carboxyl-terminal hydrolase, UCH0.1097Inherited
Fibronectin type III0.1102Inherited
POU-specific domain0.1226Inherited
Protein kinases, catalytic subunit0.1737Inherited
Phenylalanine metabolism regulatory domain0.2296Inherited
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains0.2296Inherited
Multidrug efflux transporter AcrB transmembrane domain0.2296Inherited
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.2296Inherited
T-box0.23Inherited
WD40-repeat0.2537Inherited
Tetratricopeptide repeat (TPR)0.4642Inherited
HMG-box0.4642Inherited
Transforming growth factor (TGF)-beta0.4692Inherited
Retrovirus zinc finger-like domains0.5762Inherited
Motor proteins0.6145Inherited
Cadherin0.6942Inherited
Tropomyosin0.7418Inherited
VWC domain0.7418Inherited
Classic zinc finger, C2H20.7648Inherited
DBL homology domain (DH-domain)0.8305Inherited

Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
LDL receptor-like module0Direct
SMAD MH1 domain0Direct
BRK domain-like0Direct
Doublecortin (DC)0Direct
Ypt/Rab-GAP domain of gyp1p0Direct
Moesin tail domain0Direct
Kazal-type serine protease inhibitors0Direct
Caspase-like0Direct
Arginase/deacetylase0Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0Direct
CalX-like0Direct
CCHHC domain0Direct
PP2C-like0Direct
ADC-like0Direct
Ras GEF0Direct
Composite domain of metallo-dependent hydrolases0Direct
Cullin repeat-like0Direct
Hormone receptor domain0Direct
Class II aaRS ABD-related0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
Cap-Gly domain0Direct
Ferredoxin reductase-like, C-terminal NADP-linked domain0Direct
Glutathione synthetase ATP-binding domain-like0Direct
HD-domain/PDEase-like0Direct
Notch domain0Direct
Polo-box domain0Direct
Class I glutamine amidotransferase-like0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
Aldolase0Direct
Cdc48 domain 2-like0Direct
Metallo-dependent hydrolases0Direct
SNARE fusion complex0Direct
Sec7 domain0Direct
Nuclear receptor coactivator interlocking domain0Direct
Riboflavin synthase domain-like0Direct
LCCL domain0Direct
Growth factor receptor domain0.004111Inherited
Homeodomain-like0.004411Inherited
EGF/Laminin0.005611Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.01077Inherited
Nuclear receptor ligand-binding domain0.01553Inherited
L domain-like0.05103Inherited
Immunoglobulin0.05358Inherited
SMAD/FHA domain0.06011Inherited
Cytochrome P4500.06011Inherited
DEATH domain0.0802Inherited
Fibronectin type III0.09896Inherited
PDZ domain-like0.1502Inherited
Snake toxin-like0.1794Inherited
lambda repressor-like DNA-binding domains0.1794Inherited
Protein kinase-like (PK-like)0.1876Inherited
WD40 repeat-like0.1923Inherited
Cystine-knot cytokines0.2186Inherited
Aromatic aminoacid monoxygenases, catalytic and oligomerization domains0.2229Inherited
Alkaline phosphatase-like0.2229Inherited
ACT-like0.2229Inherited
Class II aaRS and biotin synthetases0.2229Inherited
Cysteine proteinases0.2887Inherited
Cyclin-like0.3336Inherited
Subtilisin-like0.3702Inherited
FnI-like domain0.3745Inherited
NAD(P)-binding Rossmann-fold domains0.4435Inherited
HMG-box0.4495Inherited
C-type lectin-like0.5676Inherited
Retrovirus zinc finger-like domains0.5709Inherited
Cadherin-like0.6235Inherited
Nucleotide-diphospho-sugar transferases0.631Inherited
Protease propeptides/inhibitors0.6651Inherited
Multidrug efflux transporter AcrB transmembrane domain0.6651Inherited
Tropomyosin0.7315Inherited
beta-beta-alpha zinc fingers0.806Inherited
DBL homology domain (DH-domain)0.8211Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
    		• 0Direct
    55550,55550
  • 55550 - SH2 domain
  • 55550 - SH2 domain
    		• 0Direct
    57440,57440
  • 57440 - Kringle-like
  • 57440 - Kringle-like
    		• 0Direct
    48425,50729
  • 48425 - Sec7 domain
  • 50729 - PH domain-like
    		• 0Direct
    52058,49265
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
    		• 0Direct
    56968,48431
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
    		• 0Direct
    89837,89837
  • 89837 - Doublecortin (DC)
  • 89837 - Doublecortin (DC)
    		• 0Direct
    103575,81296
  • 103575 - Plexin repeat
  • 81296 - E set domains
    		• 0Direct
    47986,52129
  • 47986 - DEATH domain
  • 52129 - Caspase-like
    		• 0Direct
    63380,52343
  • 63380 - Riboflavin synthase domain-like
  • 52343 - Ferredoxin reductase-like, C-terminal NADP-linked domain
    		• 0Direct
    111418,81321
  • 111418 - Hormone receptor domain
  • 81321 - Family A G protein-coupled receptor-like
    		• 0Direct
    90193,90193
  • 90193 - Notch domain
  • 90193 - Notch domain
    		• 0Direct
    46785,46785
  • 46785 - "Winged helix" DNA-binding domain
  • 46785 - "Winged helix" DNA-binding domain
    		• 0Direct
    57196,63825
  • 57196 - EGF/Laminin
  • 63825 - YWTD domain
    		• 0Direct
    141072,141072
  • 141072 - CalX-like
  • 141072 - CalX-like
    		• 0Direct
    57196,49899
  • 57196 - EGF/Laminin
  • 49899 - Concanavalin A-like lectins/glucanases
    		• 0Direct
    57903,47370
  • 57903 - FYVE/PHD zinc finger
  • 47370 - Bromodomain
    		• 0Direct
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
    		• 0Direct
    57184,57603
  • 57184 - Growth factor receptor domain
  • 57603 - FnI-like domain
    		• 0Direct
    49417,81296
  • 49417 - p53-like transcription factors
  • 81296 - E set domains
    		• 0Direct
    50156,50044
  • 50156 - PDZ domain-like
  • 50044 - SH3-domain
    		• 0Direct
    49562,48371
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48371 - ARM repeat
    		• 0Direct
    49265,49899
  • 49265 - Fibronectin type III
  • 49899 - Concanavalin A-like lectins/glucanases
    		• 0Direct
    54791,54791
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
    		• 0Direct
    81324,81296
  • 81324 - Voltage-gated potassium channels
  • 81296 - E set domains
    		• 0Direct
    54585,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    51556,51338
  • 51556 - Metallo-dependent hydrolases
  • 51338 - Composite domain of metallo-dependent hydrolases
    		• 0Direct
    63825,57196
  • 63825 - YWTD domain
  • 57196 - EGF/Laminin
    		• 0Direct
    52799,49562
  • 52799 - (Phosphotyrosine protein) phosphatases II
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
    		• 0Direct
    48097,56112
  • 48097 - Regulator of G-protein signaling, RGS
  • 56112 - Protein kinase-like (PK-like)
    		• 0Direct
    57196,90193
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
    		• 0Direct
    49854,57196
  • 49854 - Spermadhesin, CUB domain
  • 57196 - EGF/Laminin
    		• 0Direct
    50692,54585
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
    		• 0Direct
    57850,57850
  • 57850 - RING/U-box
  • 57850 - RING/U-box
    		• 0Direct
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
    		• 0.002359Inherited
    57196,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
    		• 0.00504Inherited
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
    		• 0.03065Inherited
    57184,57184
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
    		• 0.06008Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
    		• 0.06177Inherited
    50156,50156
  • 50156 - PDZ domain-like
  • 50156 - PDZ domain-like
    		• 0.1794Inherited
    55021,56534
  • 55021 - ACT-like
  • 56534 - Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
    		• 0.2229Inherited
    49562,48350
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48350 - GTPase activation domain, GAP
    		• 0.3025Inherited
    57603,57603
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
    		• 0.4627Inherited
    54897,52743
  • 54897 - Protease propeptides/inhibitors
  • 52743 - Subtilisin-like
    		• 0.4627Inherited
    49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
    		• 0.7414Inherited
    48065,50729
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
    		• 0.8822Inherited
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
    		• 0.9271Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,63825,57196
  • 57196 - EGF/Laminin
  • 63825 - YWTD domain
  • 57196 - EGF/Laminin
    		• 0Direct
    57196,57184,57196
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
    		• 0Direct
    57184,57184,57196
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
    		• 0Direct
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
    		• 0Direct
    57196,49899,49899
  • 57196 - EGF/Laminin
  • 49899 - Concanavalin A-like lectins/glucanases
  • 49899 - Concanavalin A-like lectins/glucanases
    		• 0Direct
    54585,52540,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    49854,57196,49854
  • 49854 - Spermadhesin, CUB domain
  • 57196 - EGF/Laminin
  • 49854 - Spermadhesin, CUB domain
    		• 0Direct
    57196,57196,90193
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
    		• 0Direct
    90193,90193,90193
  • 90193 - Notch domain
  • 90193 - Notch domain
  • 90193 - Notch domain
    		• 0Direct
    57196,57184,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
    		• 0Direct
    50156,50044,52540
  • 50156 - PDZ domain-like
  • 50044 - SH3-domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    57850,57850,57850
  • 57850 - RING/U-box
  • 57850 - RING/U-box
  • 57850 - RING/U-box
    		• 0Direct
    50692,54585,52540
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    49562,48371,56112
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48371 - ARM repeat
  • 56112 - Protein kinase-like (PK-like)
    		• 0Direct
    57424,57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
    		• 0Direct
    57184,52058,49265
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
    		• 0Direct
    103575,81296,81296
  • 103575 - Plexin repeat
  • 81296 - E set domains
  • 81296 - E set domains
    		• 0Direct
    57196,90193,90193
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 90193 - Notch domain
    		• 0Direct
    52058,49265,49265
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
    		• 0Direct
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
    		• 0.002423Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
    		• 0.08707Inherited
    57603,57603,57603
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
    		• 0.2229Inherited
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
    		• 0.631Inherited

    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)
    Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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    © Copyright 2013 The SUPERFAMILY authors and Julian Gough.