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Zebrafish Anatomy (ZA): skeletal muscle cell

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: ZA Hierarchy (zebrafish anatomy from ZFIN zebrafish anatomy ontology)

Shortest distance to current term (+ for parents, - for children) ZA term [ZA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   zebrafish anatomical entity [ZFA:0100000] <6>
+ + + + + 5:   whole organism [ZFA:0001094] <8>(272|295) (272|155|71)
+ + + + + 5:   anatomical group [ZFA:0001512] <5>(178|208) (181|127|60)
+ + + + + 5:   cell [ZFA:0009000] <89>(49|68) (55|35|22)
+ + + + 4:   anatomical structure [ZFA:0000037] <16>(275|296) (275|157|73)
+ + + + 4:   anatomical system [ZFA:0001439] <18>(164|193) (168|119|58)
+ + + + 4:   electrically active cell [ZFA:0009128] <2>(15|20) (17|14|7)
+ + + 3:   portion of tissue [ZFA:0001477] <232>(42|51) (48|34|23)
+ + + 3:   electrically responsive cell [ZFA:0009190] <3>(14|18) (16|13|7)
+ + + 3:   musculature system [ZFA:0000548] <5>(11|14) (12|13|9)
+ + 2:   muscle cell [ZFA:0009114] <3>(8|10) (9|7|5)
+ + 2:   muscle [ZFA:0005145] <31>(8|11) (9|11|8)
+ 1:   skeletal muscle [ZFA:0005277] <15>(6|7) (6|6|5)
+ 1:   striated muscle cell [ZFA:0005784] <2>(7|8) (8|6|5)
0:   skeletal muscle cell [ZFA:0009115] <2>(6|6) (6|6|5)
- 1:   fast muscle cell [ZFA:0009117] <30>(0|0) (0|0|0)
- 1:   slow muscle cell [ZFA:0009116] <30>(0|2) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
GroEL-intermediate domain like0.000001298Direct
GroEL apical domain-like0.00001386Direct
GroEL equatorial domain-like0.00003249Direct
Multidrug efflux transporter AcrB transmembrane domain0.0000687Direct
IP3 receptor type 1 binding core, domain 20.00006996Direct
MIR domain0.0008392Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Group II chaperonin (CCT, TRIC), ATPase domain0.000000118Direct
Group II chaperonin (CCT, TRIC), apical domain0.0000007844Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.0000023Direct
Multidrug efflux transporter AcrB transmembrane domain0.0001956Direct
MIR domain0.0005335Direct
Laminin-type module0.005211Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
GroEL-intermediate domain like0.0000007354Direct
GroEL apical domain-like0.000007927Direct
GroEL equatorial domain-like0.00001871Direct
Multidrug efflux transporter AcrB transmembrane domain0.00003983Direct
IP3 receptor type 1 binding core, domain 20.00004053Direct
MIR domain0.0005112Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
100909,49899
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    82109,82109
  • 82109 - MIR domain
  • 82109 - MIR domain
  • 0Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000007354Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.0000007354Direct
    82109,100909
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 0.00004053Direct
    49265,48726
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.00004053Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    82109,100909,49899
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0Direct
    82109,82109,100909
  • 82109 - MIR domain
  • 82109 - MIR domain
  • 100909 - IP3 receptor type 1 binding core, domain 2
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000007354Direct
    48726,49265,48726
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.00004053Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.0007147Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)