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Home > SCOP hierarchy > all-alpha NTP pyrophosphatases superfamily

all-alpha NTP pyrophosphatases superfamily

SCOP classification

Root:	SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:	All alpha proteins [ 46456] (284)
Fold:	all-alpha NTP pyrophosphatases [ 101385]
Superfamily:	all-alpha NTP pyrophosphatases [ 101386] (4)
Families:	MazG-like [ 116993] (3)
	AF0060-like [ 140794]
	Type II deoxyuridine triphosphatase [ 101387]
	HisE-like (PRA-PH) [ 140797]

Superfamily statistics

	Genomes (2,859)	Uniprot 2018_03 genome	PDB chains (SCOP 1.75)
Domains	7,812	67,476	12
Proteins	6,572	55,831	12

Functional annotation

General category	Metabolism
Detailed category	Other enzymes

Document: Function annotation of SCOP domain superfamilies

Enzyme Commission (EC)

(show details)

	EC term	FDR (all)	SDEO level	Annotation (direct or inherited)
Enzyme Commission (EC)	Acting on acid anhydrides	0	Least Informative	Direct
Enzyme Commission (EC)	Oxidoreductases	1	Least Informative	Inherited
Enzyme Commission (EC)	In phosphorous-containing anhydrides	0	Moderately Informative	Direct
Enzyme Commission (EC)	With NAD(+) or NADP(+) as acceptor	1	Moderately Informative	Inherited
Enzyme Commission (EC)	In cyclic amidines	0	Informative	Direct
Enzyme Commission (EC)	Histidinol dehydrogenase	0.0000004017	Highly Informative	Direct

Document: EC annotation of SCOP domains

Enzyme Commission (EC)

(show details)

	EC term	FDR (all)	SDEC level	Annotation (direct or inherited)
Enzyme Commission (EC)	Hydrolases	0	Least Informative	Direct
Enzyme Commission (EC)	Oxidoreductases	1	Least Informative	Inherited
Enzyme Commission (EC)	Acting on acid anhydrides	0	Moderately Informative	Direct
Enzyme Commission (EC)	Acting on carbon-nitrogen bonds, other than peptide bonds	1	Moderately Informative	Inherited
Enzyme Commission (EC)	Acting on the CH-OH group of donors	1	Moderately Informative	Inherited
Enzyme Commission (EC)	In phosphorus-containing anhydrides	0	Informative	Direct
Enzyme Commission (EC)	In cyclic amidines	0	Informative	Direct
Enzyme Commission (EC)	With NAD(+) or NADP(+) as acceptor	1	Informative	Inherited

Document: EC annotation of SCOP domains

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Internal database links

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.

Alignments of sequences to 15 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.

Browse and view proteins in genomes which have different domain combinations including a all-alpha NTP pyrophosphatases domain.

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.

Explore domain occurrence network where nodes represent genomes and edges are domain architectures (shared between genomes) containing the superfamily of interest.

There are 15 hidden Markov models representing the all-alpha NTP pyrophosphatases superfamily. Information on how the models are built, and plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be inspected.

Jump to [ Top of page · SCOP classification · Functional annotation · Enzyme Commission (EC) · Enzyme Commission (EC) · Internal database links ]