SUPERFAMILY 1.75 HMM library and genome assignments server

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Exocyst complex component family

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All alpha proteins [ 46456] (284)
Fold:   alpha-alpha superhelix [ 48370] (24)
Superfamily:   Cullin repeat-like [ 74788] (2)
Family:   Exocyst complex component [ 140851] (2)

Family statistics
Genomes (152) Uniprot 2018_03 genome PDB chains (SCOP 1.75)
Domains 183 590 2
Proteins 183 590 2

Arabidopsis Plant Ontology (AP)

show details)
AP termFDR (all)SDAP levelAnnotation (direct or inherited)
Plant ANatomical entity (PAN)root0.107Least InformativeInherited
Plant ANatomical entity (PAN)portion of meristem tissue0.509Least InformativeInherited
Plant ANatomical entity (PAN)portion of ground tissue0.000000002895InformativeDirect
Plant ANatomical entity (PAN)root tip0.00004155InformativeDirect
Plant ANatomical entity (PAN)vascular system0.001758InformativeInherited
Plant ANatomical entity (PAN)stele0.000004216Highly InformativeDirect
Plant ANatomical entity (PAN)lateral root primordium0.00003862Highly InformativeDirect
Plant ANatomical entity (PAN)root epidermal cell0.00007746Highly InformativeDirect
Plant ANatomical entity (PAN)cortex0.03892Highly InformativeInherited

Document: AP annotation of SCOP domains

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Internal database links

Superfamily level     Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.

Superfamily level     Family level

Alignments of sequences to 7 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.

Superfamily level

Browse and view proteins in genomes which have different domain combinations including a Cullin repeat-like domain.

Superfamily level     Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.

Jump to [ Top of page · SCOP classification · Arabidopsis Plant Ontology (AP) · Internal database links ]