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Bacterial luciferase-like superfamily
SCOP classification
Superfamily statistics
Functional annotation
General category | Metabolism |
Detailed category | Other enzymes |
Document: Function annotation of SCOP domain superfamilies
Enzyme Commission (EC) (show details)
Highlighted in gray are those with FDR_all>0.001
Document: EC annotation of SCOP domains
Enzyme Commission (EC) (show details)
Highlighted in gray are those with FDR_all>0.001
| EC term | FDR (all) | IC level | SDEC level | Annotation (direct or inherited) |
Enzyme Commission (EC) | Alkanesulfonate monooxygenase | 0 | 2.952 | -- | DIRECT |
Enzyme Commission (EC) | With other, known, acceptors | 0 | 2.651 | -- | DIRECT |
Enzyme Commission (EC) | With other, known, acceptors | 0 | 2.651 | -- | DIRECT |
Enzyme Commission (EC) | Glucose-6-phosphate dehydrogenase (coenzyme-F420) | 0 | 2.952 | -- | DIRECT |
Enzyme Commission (EC) | Pyrimidine monooxygenase | 0 | 2.952 | -- | DIRECT |
Enzyme Commission (EC) | 5,10-methylenetetrahydromethanopterin reductase | 0 | 2.952 | -- | DIRECT |
Enzyme Commission (EC) | Bacterial luciferase | 0.000000000006911 | 2.952 | -- | DIRECT |
Enzyme Commission (EC) | Oxidoreductases | 0 | 0.6234 | Least Informative | DIRECT |
Enzyme Commission (EC) | Acting on the CH-OH group of donors | 1 | 1.228 | Moderately Informative | INHERITED FROM: With other, known, acceptors || Glucose-6-phosphate dehydrogenase (coenzyme-F420) |
Enzyme Commission (EC) | Acting on paired donors, with incorporation or reduction of molecular oxygen. The oxygen incorporate | 0 | 1.308 | Informative | DIRECT |
Enzyme Commission (EC) | Acting on the CH-NH group of donors | 0.4403 | 1.505 | Informative | INHERITED FROM: 5,10-methylenetetrahydromethanopterin reductase || With other, known, acceptors |
Enzyme Commission (EC) | Miscellaneous | 0.000000000000001518 | 2.049 | Highly Informative | DIRECT |
Enzyme Commission (EC) | With reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen | 0.000000000004322 | 1.91 | Highly Informative | DIRECT |
Document: EC annotation of SCOP domains
InterPro annotation
InterPro database
PDBeMotif information about ligands, sequence and structure motifs
PDBeMotif resource
Jump to [ Top of page · SCOP classification · InterPro annotation · PDBeMotif links · Functional annotation · Enzyme Commission (EC) · Enzyme Commission (EC) ]
Internal database links
Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry
out SCOP domain assignments to all genomes at the superfamily level.
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Alignments of sequences to 17 models
in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical
are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.
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Browse and view proteins in genomes which have
different domain combinations including a Bacterial luciferase-like domain.
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Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.
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Explore domain occurrence network where nodes represent genomes and edges are domain architectures (shared between genomes) containing the superfamily of interest.
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There are 17 hidden Markov models representing the Bacterial luciferase-like superfamily. Information on how the models are built, and plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be inspected.
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Jump to [ Top of page · SCOP classification · InterPro annotation · PDBeMotif links · Functional annotation · Enzyme Commission (EC) · Enzyme Commission (EC) · Internal database links ]
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