| Root: | SCOP hierarchy in SUPERFAMILY [ 0] (11) |
| Class: | Alpha and beta proteins (a+b) [ 53931] (376) |
| Folds: | Microbial ribonucleases [ 53932] |
| | Lysozyme-like [ 53954] |
| | Cysteine proteinases [ 54000] |
| | His-Me finger endonucleases [ 54059] |
| | RNase A-like [ 54075] |
| | EndoU-like [ 142876] |
| | Prion-like [ 54097] |
| | LysM domain [ 54105] |
| | gpW/XkdW-like [ 64209] (2) |
| | Hypothetical protein MTH677 [ 110782] |
| | GTF2I-like repeat [ 117772] |
| | Urease, gamma-subunit [ 54110] |
| | IL8-like [ 54116] (2) |
| | DNA-binding domain [ 54170] |
| | Penicillin-binding protein 2x (pbp-2x), c-terminal domain [ 54183] |
| | Dodecin subunit-like [ 88797] (6) |
| | Ribosomal proteins S24e, L23 and L15e [ 54188] |
| | Ribosome binding domain-like [ 100965] (2) |
| | TFB5-like [ 142896] |
| | Obg GTP-binding protein C-terminal domain [ 102740] |
| | HIT-like [ 54196] (2) |
| | Secretion chaperone-like [ 69634] (5) |
| | DNA-binding domain of intron-encoded endonucleases [ 64495] |
| | MotA C-terminal domain-like [ 69651] |
| | YktB/PF0168-like [ 142912] |
| | Mago nashi protein [ 89816] |
| | WGR domain-like [ 142920] |
| | PH1570-like [ 159901] |
| | Ribosomal protein S5 domain 2-like [ 54210] |
| | beta-Grasp (ubiquitin-like) [ 54235] (14) |
| | MM3350-like [ 159940] |
| | WWE domain [ 117838] |
| | FAD-linked reductases, C-terminal domain [ 54372] |
| | Cystatin-like [ 54402] (7) |
| | Nuclease A inhibitor (NuiA) [ 82601] |
| | Colicin D/E5 nuclease domain [ 102823] |
| | RelE-like [ 143010] |
| | Hypothetical protein SAV1430 [ 110835] |
| | Ns1 effector domain-like [ 143020] |
| | YbaB-like [ 82606] |
| | Kinetochore globular domain-like [ 143025] |
| | L35p-like [ 143033] |
| | Cell division protein ZapA-like [ 102828] |
| | ssDNA-binding transcriptional regulator domain [ 54446] |
| | Photosystem I subunit PsaD [ 64233] |
| | GINS/PriA/YqbF domain [ 160058] |
| | MHC antigen-recognition domain [ 54451] |
| | UBC-like [ 54494] |
| | SAND domain-like [ 63762] |
| | NRDP1 C-terminal domain-like [ 160087] |
| | Coronavirus NSP8-like [ 143075] |
| | ParB/Sulfiredoxin [ 110848] |
| | Gamma-glutamyl cyclotransferase-like [ 110856] |
| | BB1717-like [ 143080] |
| | SARS Nsp1-like [ 160098] |
| | Acetoacetate decarboxylase-like [ 160103] |
| | AF0104/ALDC/Ptd012-like [ 117855] |
| | NSFL1 (p97 ATPase) cofactor p47, SEP domain [ 102847] |
| | TTHA1013/TTHA0281-like [ 143099] |
| | YegP-like [ 160112] |
| | Diaminopimelate epimerase-like [ 54505] |
| | GFP-like [ 54510] |
| | Tubby C-terminal domain-like [ 54517] |
| | Pili subunits [ 54522] |
| | Mitochondrial glycoprotein MAM33-like [ 54528] |
| | NAP-like [ 143112] |
| | Polo-box domain [ 82614] |
| | mRNA decapping enzyme DcpS N-terminal domain [ 102859] |
| | Inhibitor of vertebrate lysozyme, Ivy [ 89871] |
| | FKBP-like [ 54533] (3) |
| | Ribosomal protein S16 [ 54564] |
| | Ribosomal protein S19 [ 54569] |
| | YefM-like [ 143119] |
| | Ribosomal protein L31e [ 54574] |
| | Allophycocyanin linker chain (domain) [ 54579] |
| | Cdc48 domain 2-like [ 54584] |
| | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase [ 54592] |
| | Chromosomal protein MC1 [ 102874] |
| | CPE0013-like [ 160147] |
| | beta-hairpin-alpha-hairpin repeat [ 74651] (2) |
| | Proguanylin [ 89889] |
| | SecB-like [ 54610] |
| | MesJ substrate recognition domain-like [ 82828] |
| | FYSH domain [ 89894] |
| | VSV matrix protein [ 75403] |
| | DNA-binding domain of Mlu1-box binding protein MBP1 [ 54615] |
| | Heme-binding protein A (HasA) [ 54620] |
| | Chalcone isomerase [ 54625] |
| | Coproporphyrinogen III oxidase [ 102885] |
| | Hypothetical protein Ta1206 [ 102890] |
| | CBS-domain pair [ 54630] |
| | Thioesterase/thiol ester dehydrase-isomerase [ 54636] |
| | DLC [ 54647] |
| | CI-2 family of serine protease inhibitors [ 54653] |
| | Integrin beta tail domain [ 69686] |
| | YcgL-like [ 160190] |
| | alpha/beta-Hammerhead [ 54664] (5) |
| | POZ domain [ 54694] |
| | EF-Ts domain-like [ 54712] (2) |
| | Fe,Mn superoxide dismutase (SOD), C-terminal domain [ 54718] |
| | ClpS-like [ 54735] |
| | Hypothetical protein MTH1880 [ 75411] |
| | Ribosomal L11/L12e N-terminal domain [ 54746] |
| | Anti-LPS factor/recA domain [ 54751] (2) |
| | Signal recognition particle alu RNA binding heterodimer, SRP9/14 [ 54761] |
| | dsRBD-like [ 54767] (5) |
| | 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain [ 110920] |
| | NMB0488-like [ 160206] |
| | SRP19 [ 69694] |
| | SufE/NifU [ 82648] |
| | FlaG-like [ 160213] |
| | AMPKBI-like [ 160218] |
| | DNA-binding protein Tfx [ 89914] |
| | Eukaryotic type KH-domain (KH-domain type I) [ 54790] |
| | Alpha-lytic protease prodomain-like [ 54805] (10) |
| | Nucleotidyltransferase [ 81302] |
| | Nqo5-like [ 143242] |
| | Ribosomal protein S3 C-terminal domain [ 54820] |
| | Transcription factor NusA, N-terminal domain [ 69704] |
| | Enolase N-terminal domain-like [ 54825] |
| | Ribosomal protein L22 [ 54842] |
| | Prokaryotic ribosomal protein L17 [ 64262] |
| | GroEL-intermediate domain like [ 54848] |
| | PX domain [ 64267] |
| | Shew3726-like [ 160271] |
| | DsrC, the gamma subunit of dissimilatory sulfite reductase [ 69720] |
| | DNA damage-inducible protein DinI [ 54856] |
| | HSP90 C-terminal domain [ 110941] |
| | Ferredoxin-like [ 54861] (59) |
| | PurS-like [ 109622] |
| | RplX-like [ 160373] |
| | Dystroglycan, domain 2 [ 111005] |
| | Pseudouridine synthase [ 100877] |
| | SP0830-like [ 160378] |
| | Folate-binding domain [ 103024] |
| | THUMP domain [ 143436] |
| | AMMECR1-like [ 143446] |
| | NosL/MerB-like [ 160386] |
| | YehU-like [ 118000] |
| | Hypothetical protein YwqG [ 103031] |
| | VC0467-like [ 143455] |
| | Lesion bypass DNA polymerase (Y-family), little finger domain [ 100878] |
| | ImmE5-like [ 143468] |
| | Ribosomal protein L30p/L7e [ 55128] |
| | Chorismate lyase-like [ 64287] |
| | YdfO-like [ 160418] |
| | TM1622-like [ 143476] |
| | BH3703-like [ 160423] |
| | Probable bacterial effector-binding domain [ 55135] |
| | CheC-like [ 103038] |
| | LigT-like [ 55143] |
| | Pepsin inhibitor-3 [ 55148] |
| | CYTH-like phosphatases [ 55153] |
| | Antiparallel beta/alpha barrel (PT-barrel) [ 143491] |
| | eIF1-like [ 55158] (2) |
| | Hedgehog/DD-peptidase [ 55165] |
| | Alpha-L RNA-binding motif [ 55173] |
| | RRF/tRNA synthetase additional domain-like [ 55185] (4) |
| | LuxS/MPP-like metallohydrolase [ 63410] |
| | IF3-like [ 55199] (8) |
| | PUG domain-like [ 143502] |
| | PG1857-like [ 160447] |
| | PB2 C-terminal domain-like [ 160452] |
| | Ribosome binding protein Y (YfiA homologue) [ 69753] |
| | TolA/TonB C-terminal domain [ 74652] |
| | Yeast killer toxins [ 55220] |
| | Cell division protein MinE topological specificity domain [ 55228] |
| | Hypothetical protein YoaG [ 103062] |
| | BLRF2-like [ 160458] |
| | Nucleocapsid protein dimerization domain [ 103067] |
| | Cyanase C-terminal domain [ 55233] |
| | Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains [ 82713] |
| | RuBisCO, small subunit [ 55238] |
| | DCoH-like [ 55247] (5) |
| | TRCF domain-like [ 143516] |
| | NMB0513-like [ 160471] |
| | PA1123-like [ 160476] |
| | Hypothetical protein Yml108w [ 100886] |
| | MutS N-terminal domain-like [ 55266] (2) |
| | GYF/BRK domain-like [ 55276] (2) |
| | GTP cyclohydrolase I feedback regulatory protein, GFRP [ 69760] |
| | RL5-like [ 55281] |
| | RPB5-like RNA polymerase subunit [ 55286] |
| | Bacillus chorismate mutase-like [ 55297] (9) |
| | YjbQ-like [ 111037] |
| | Tautomerase/MIF [ 55330] |
| | FwdE/GAPDH domain-like [ 55346] (4) |
| | Ava3019-like [ 160531] |
| | Hypothetical protein PF0899 [ 111056] |
| | Major capsid protein gp5 [ 56562] |
| | MK0786-like [ 143559] |
| | YkuJ-like [ 143566] |
| | N domain of copper amine oxidase-like [ 55382] (5) |
| | Aha1/BPI domain-like [ 55393] (2) |
| | SpoVG-like [ 160536] |
| | Subtilisin inhibitor [ 55398] |
| | RNA bacteriophage capsid protein [ 55404] |
| | eIF4e-like [ 55417] |
| | CO dehydrogenase flavoprotein C-domain-like [ 55423] (2) |
| | SRF-like [ 55454] |
| | Origin of replication-binding domain, RBD-like [ 55463] |
| | SARS receptor-binding domain-like [ 143586] |
| | Hut operon positive regulatory protein HutP [ 111063] |
| | Hypothetical protein yfbM [ 111068] |
| | TTHA1528-like [ 143591] |
| | YojJ-like [ 143596] |
| | STIV B116-like [ 143601] |
| | Bacillus phage protein [ 111073] |
| | FMN-dependent nitroreductase-like [ 55468] |
| | N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 [ 55480] |
| | EscU C-terminal domain-like [ 160543] |
| | Zincin-like [ 55485] (2) |
| | SH2-like [ 55549] |
| | HPr-like [ 55593] (2) |
| | TrkA C-terminal domain-like [ 116725] |
| | Hypothetical protein YjiA, C-terminal domain [ 90001] |
| | YggU-like [ 69785] |
| | Homing endonuclease-like [ 55603] (2) |
| | T-fold [ 55619] (2) |
| | Cell cycle regulatory proteins [ 55636] |
| | YonK-like [ 160569] |
| | BLIP-like [ 55647] (2) |
| | Ribosomal protein L9 C-domain [ 55652] |
| | MbtH/L9 domain-like [ 55657] (2) |
| | Tombusvirus P19 core protein, VP19 [ 103144] |
| | Ribonuclease PH domain 2-like [ 55665] |
| | Regulatory factor Nef [ 55670] |
| | CytB endotoxin-like [ 55675] |
| | Class II aaRS and biotin synthetases [ 55680] |
| | Subdomain of clathrin and coatomer appendage domain [ 55710] |
| | SCP-like [ 55717] |
| | Ta1353-like [ 103164] |
| | Mog1p/PsbP-like [ 55723] |
| | SMI1/KNR4-like [ 160630] |
| | Acyl-CoA N-acyltransferases (Nat) [ 55728] |
| | Gelsolin-like [ 55752] (3) |
| | PHP14-like [ 143723] |
| | Profilin-like [ 55769] (10) |
| | Ligand-binding domain in the NO signalling and Golgi transport [ 111125] |
| | Phage tail protein-like [ 143748] |
| | PR-1-like [ 55796] |
| | Phoshotransferase/anion transport protein [ 55803] |
| | Nudix [ 55810] |
| | 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain [ 55815] |
| | YrdC/RibB [ 55820] |
| | GIY-YIG endonuclease [ 82770] |
| | YbaK/ProRS associated domain [ 55825] |
| | Thymidylate synthase/dCMP hydroxymethylase [ 55830] |
| | Thymidylate synthase-complementing protein Thy1 [ 69795] |
| | N-acetylmuramoyl-L-alanine amidase-like [ 55845] |
| | Cytochrome b5-like heme/steroid binding domain [ 55855] |
| | BTG domain-like [ 160695] |
| | DUSP-like [ 143790] |
| | DNA topoisomerase I domain [ 55868] |
| | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase [ 55873] |
| | YehR-like [ 160703] |
| | Sporulation response regulatory protein Spo0B [ 55889] |
| | Ribonuclease Rh-like [ 55894] |
| | YlxR-like [ 64375] |
| | YggX-like [ 111147] |
| | L28p-like [ 143799] |
| | YqaI-like [ 160712] |
| | Ornithine decarboxylase C-terminal domain [ 55903] |
| | Pentein, beta/alpha-propeller [ 55908] |
| | Creatinase/aminopeptidase [ 55919] |
| | gpW/gp25-like [ 160718] |
| | Glutamine synthetase/guanido kinase [ 55930] |
| | TBP-like [ 55944] (11) |
| | XisI-like [ 143846] |
| | S-adenosylmethionine synthetase [ 55972] |
| | DNA clamp [ 55978] |
| | Hypothetical protein TM0160 [ 103255] |
| | TTHC002-like [ 160760] |
| | Molybdenum cofactor-binding domain [ 56002] |
| | NE1680-like [ 160765] |
| | Nitrite and sulphite reductase 4Fe-4S domain-like [ 56013] |
| | DeoB insert domain-like [ 143855] |
| | The spindle assembly checkpoint protein mad2 [ 56018] |
| | Phospholipase D/nuclease [ 56023] |
| | CorA soluble domain-like [ 143864] |
| | Monooxygenase (hydroxylase) regulatory protein [ 56028] |
| | PurM C-terminal domain-like [ 56041] |
| | PF0523-like [ 143869] |
| | Chorismate synthase, AroC [ 103262] |
| | Hsp33 domain [ 64396] |
| | MTH1598-like [ 69818] |
| | Protein-L-isoaspartyl O-methyltransferase, C-terminal domain [ 68929] |
| | OsmC-like [ 82783] |
| | Hypothetical protein HI1480 [ 103276] |
| | ERH-like [ 143874] |
| | Ribosomal protein S8 [ 56046] |
| | Ribosomal protein L6 [ 56052] |
| | NE0471 N-terminal domain-like [ 143879] |
| | Lp2179-like [ 160799] |
| | RGC domain-like [ 143884] |
| | Smc hinge domain [ 75552] |
| | DNA mismatch repair protein MutL [ 118115] |
| | ATP-grasp [ 56058] (2) |
| | SAICAR synthase-like [ 56103] |
| | Protein kinase-like (PK-like) [ 56111] |
| | FAD-binding/transporter-associated domain-like [ 56175] |
| | Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain [ 56193] |
| | Methenyltetrahydromethanopterin cyclohydrolase [ 56198] |
| | Prim-pol domain [ 56746] |
| | Hect, E3 ligase catalytic domain [ 56203] |
| | Nitrile hydratase alpha chain [ 56208] |
| | 4'-phosphopantetheinyl transferase [ 56213] |
| | DNase I-like [ 56218] |
| | Aldehyde ferredoxin oxidoreductase, N-terminal domain [ 56227] |
| | Ntn hydrolase-like [ 56234] (2) |
| | DmpA/ArgJ-like [ 56265] |
| | Pyruvoyl-dependent histidine and arginine decarboxylases [ 56270] |
| | S-adenosylmethionine decarboxylase [ 56275] |
| | Metallo-hydrolase/oxidoreductase [ 56280] |
| | PP2C-like [ 81607] |
| | Metallo-dependent phosphatases [ 56299] |
| | Carbon-nitrogen hydrolase [ 56316] |
| | CNF1/YfiH-like putative cysteine hydrolases [ 64437] |
| | ADC synthase [ 56321] |
| | Sulfolobus fructose-1,6-bisphosphatase-like [ 111248] |
| | LDH C-terminal domain-like [ 56326] |
| | DNA breaking-rejoining enzymes [ 56348] |
| | Replication modulator SeqA, C-terminal DNA-binding domain [ 82807] |
| | SMAD MH1 domain [ 56365] |
| | YopH tyrosine phosphatase N-terminal domain [ 64448] |
| | Rotavirus NSP2 fragment, N-terminal domain [ 75573] |
| | Rv2827c C-terminal domain-like [ 160886] |
| | Phosphoprotein oligomerization domain-like [ 160891] |
| | Taf5 N-terminal domain-like [ 160896] |
| | Jann2411-like [ 160903] |
| | ATP12-like [ 160908] |
| | Ribosome inactivating proteins (RIP) [ 56370] |
| | ADP-ribosylation [ 56398] |
| | Peptide deformylase [ 56419] |
| | LCCL domain [ 69847] |
| | Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain [ 56424] |
| | C-type lectin-like [ 56435] |
| | Hemolytic lectin CEL-III, C-terminal domain [ 111264] |
| | SRCR-like [ 56486] (2) |
| | Fibrinogen C-terminal domain-like [ 56495] |
| | gp120 core [ 56501] |
| | Methionine synthase activation domain-like [ 56506] |
| | UbiD C-terminal domain-like [ 143967] |
| | Hypothetical protein TM0875 [ 90063] |
| | Metal cation-transporting ATPase, ATP-binding domain N [ 81661] |
| | Suppressor of Fused, N-terminal domain [ 103358] |
| | Nitric oxide (NO) synthase oxygenase domain [ 56511] |
| | Penicillin binding protein dimerisation domain [ 56518] |
| | Oxidoreductase molybdopterin-binding domain [ 56523] |
| | FAH [ 56528] |
| | Aromatic aminoacid monoxygenases, catalytic and oligomerization domains [ 56533] |
| | Substrate-binding domain of HMG-CoA reductase [ 56541] |
| | Argininosuccinate synthetase, C-terminal domain [ 69863] |
| | Hypothetical protein PH1602 [ 103364] |
| | IlvD/EDD N-terminal domain-like [ 143974] |
| | DNA methylase specificity domain [ 116733] |
| | GCM domain [ 90072] |
| | Conserved core of transcriptional regulatory protein vp16 [ 56547] |
| | Insert subdomain of RNA polymerase alpha subunit [ 56552] |
| | Baseplate structural protein gp11 [ 56557] |
| | Receptor-binding domain of short tail fibre protein gp12 [ 88873] |
| | Outer capsid protein sigma 3 [ 64464] |
| | Phosphoprotein M1, C-terminal domain [ 118172] |
| | L,D-transpeptidase pre-catalytic domain-like [ 143984] |
| | YbiA-like [ 143989] |
| | NinB [ 103369] |
| | AF2331-like [ 143994] |
| | SSo0622-like [ 111277] |
| | Putative modulator of DNA gyrase, PmbA/TldD [ 111282] |
| | PSTPO5379-like [ 160919] |
| | PG1388-like [ 160924] |
| | Oxysterol-binding protein-like [ 143999] |
| | ORC1-binding domain [ 144004] |
| | CofE-like [ 144009] |
| | Peptidoglycan deacetylase N-terminal noncatalytic region [ 144014] |
| | Non-globular alpha+beta subunits of globular proteins [ 56567] |
