SUPERFAMILY 1.75 HMM library and genome assignments server

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Home > SCOP hierarchy > Biotin holoenzyme synthetase family

Biotin holoenzyme synthetase family

SCOP classification

Root:	SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:	Alpha and beta proteins (a+b) [ 53931] (376)
Fold:	Class II aaRS and biotin synthetases [ 55680]
Superfamily:	Class II aaRS and biotin synthetases [ 55681] (4)
Family:	Biotin holoenzyme synthetase [ 55707] (2)

Family statistics

	Genomes (808)	Uniprot 2018_03 genome	PDB chains (SCOP 1.75)
Domains	818	5,953	3
Proteins	818	5,953	3

Enzyme Commission (EC)

(show details)

	EC term	FDR (all)	SDEO level	Annotation (direct or inherited)
Enzyme Commission (EC)	Ligases	0	Least Informative	Direct
Enzyme Commission (EC)	Forming carbon-nitrogen bonds	0	Moderately Informative	Direct
Enzyme Commission (EC)	Other carbon--nitrogen ligases	0	Informative	Direct

Document: EC annotation of SCOP domains

Enzyme Commission (EC)

(show details)

	EC term	FDR (all)	SDEC level	Annotation (direct or inherited)
Enzyme Commission (EC)	Transferases	0.9044	Least Informative	Inherited
Enzyme Commission (EC)	Ligases	0	Moderately Informative	Direct
Enzyme Commission (EC)	Phosphotransferases with an alcohol group as acceptor	0.001438	Moderately Informative	Inherited
Enzyme Commission (EC)	Forming carbon-nitrogen bonds	0	Informative	Direct

Document: EC annotation of SCOP domains

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Internal database links


Superfamily level	Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


Superfamily level	Family level

Alignments of sequences to 49 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.

Superfamily level

Browse and view proteins in genomes which have different domain combinations including a Class II aaRS and biotin synthetases domain.


Superfamily level	Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.

Jump to [ Top of page · SCOP classification · Enzyme Commission (EC) · Enzyme Commission (EC) · Internal database links ]