SUPERFAMILY 1.75 HMM library and genome assignments server

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Triple coiled coil domain of C-type lectins family

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Coiled coil proteins [ 57942] (7)
Fold:   Parallel coiled-coil [ 57943] (34)
Superfamily:   Triple coiled coil domain of C-type lectins [ 57944]
Family:   Triple coiled coil domain of C-type lectins [ 57945] (3)


Family statistics
Genomes (0) Uniprot 2018_03 genome PDB chains (SCOP 1.75)
Domains 0 0 0
Proteins 0 0 0


Disease Ontology (DO)

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show details)
DO termFDR (all)SDDO levelAnnotation (direct or inherited)
Disease Ontology (DO)lower respiratory tract disease0.0001019Moderately InformativeDirect
Disease Ontology (DO)disease by infectious agent0.001793Moderately InformativeInherited
Disease Ontology (DO)genetic disease0.0031Moderately InformativeInherited
Disease Ontology (DO)upper respiratory tract disease0.00000003268InformativeDirect
Disease Ontology (DO)interstitial lung disease0.0000003093InformativeDirect
Disease Ontology (DO)autosomal recessive disease0.0001885InformativeDirect
Disease Ontology (DO)asthma0.0003625InformativeDirect
Disease Ontology (DO)cystic fibrosis0.00001197Highly InformativeDirect
Disease Ontology (DO)tuberculosis0.0000211Highly InformativeDirect

Document: DO annotation of SCOP domains

Mouse Phenotype (MP)

(show details)
MP termFDR (all)SDMP levelAnnotation (direct or inherited)
Mammalian Phenotype (MP)hematopoietic system phenotype0.05785Least InformativeInherited
Mammalian Phenotype (MP)immune system phenotype0.06127Least InformativeInherited
Mammalian Phenotype (MP)abnormal homeostasis0.1033Least InformativeInherited
Mammalian Phenotype (MP)altered susceptibility to infection0.0002841Moderately InformativeDirect
Mammalian Phenotype (MP)abnormal professional antigen presenting cell morphology0.001698Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal protein level0.002183Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal immune serum protein physiology0.002458Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal myeloid cell morphology0.008394Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal macrophage morphology0.0001272InformativeDirect
Mammalian Phenotype (MP)increased susceptibility to infection0.0001513InformativeDirect

Document: MP annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Disease Ontology (DO) · Mouse Phenotype (MP) ]

Internal database links

   
Superfamily level     Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


   
Superfamily level     Family level

Alignments of sequences to 6 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Superfamily level

Browse and view proteins in genomes which have different domain combinations including a Triple coiled coil domain of C-type lectins domain.


   
Superfamily level     Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Jump to [ Top of page · SCOP classification · Disease Ontology (DO) · Mouse Phenotype (MP) · Internal database links ]