dcGO - A comprehensive domain-centric ontology resource for post-genomic research on functions, phenotypes, diseases and more   
  
  

Plexin repeat family

Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Small proteins [ 56992] (90)
Fold:   Trefoil/Plexin domain-like [ 57491] (3)
Superfamily:   Plexin repeat [ 103575]
Family:   Plexin repeat [ 103576] (3)

DO

Disease Ontology (DO)

DO term FDR (all) SDDO (four levels) Annotation (direct or inherited)
Disease Ontology (DO)dermatitis herpetiformis0.0000009604--Direct
Disease Ontology (DO)bullous pemphigoid0.00008657--Direct
Disease Ontology (DO)dermatitis0.02935--Inherited
Disease Ontology (DO)immune system disease0.1247--Inherited
Disease Ontology (DO)skin disease0.2425--Inherited
Disease Ontology (DO)hypersensitivity reaction disease0.5003--Inherited
Disease Ontology (DO)disease of anatomical entity0.6289--Inherited
Disease Ontology (DO)hypersensitivity reaction type II disease0.09929Moderately InformativeInherited
Disease Ontology (DO)integumentary system disease0.2637Moderately InformativeInherited
Disease Ontology (DO)bullous skin disease0.0003564InformativeDirect
Disease Ontology (DO)autoimmune disease of skin and connective tissue0.000394InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

HP

Human Phenotype (HP)

HP term FDR (all) SDHP (four levels) Annotation (direct or inherited)
Phenotypic Abnormality (PA)Neoplasm of the endocrine system0.03105--Inherited
Phenotypic Abnormality (PA)Neoplasm by anatomical site0.07694--Inherited
Phenotypic Abnormality (PA)Abnormality of thyroid morphology0.07923--Inherited
Phenotypic Abnormality (PA)Abnormality of the endocrine system0.01124Moderately InformativeInherited
Phenotypic Abnormality (PA)Neoplasm0.09024Moderately InformativeInherited
Phenotypic Abnormality (PA)Abnormality of the thyroid gland0.1764InformativeInherited
Phenotypic Abnormality (PA)Neoplasm of the thyroid gland0.0007107Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

MP

Mouse Phenotype (MP)

MP term FDR (all) SDMP (four levels) Annotation (direct or inherited)
Mammalian Phenotype (MP)ectopic cerebellar granule cells0.00000000002664--Direct
Mammalian Phenotype (MP)abnormal cerebellar granule cell morphology0.00000004978--Direct
Mammalian Phenotype (MP)increased susceptibility to kidney reperfusion injury0.0000001574--Direct
Mammalian Phenotype (MP)abnormal retinal inner plexiform layer morphology0.000001699--Direct
Mammalian Phenotype (MP)abnormal cerebellar granule layer morphology0.000003081--Direct
Mammalian Phenotype (MP)abnormal retina morphology0.000007464--Direct
Mammalian Phenotype (MP)abnormal ocular fundus morphology0.000008307--Direct
Mammalian Phenotype (MP)abnormal kidney epithelium morphology0.000009026--Direct
Mammalian Phenotype (MP)abnormal hippocampal mossy fiber morphology0.00002953--Direct
Mammalian Phenotype (MP)abnormal cerebellar cortex morphology0.0002506--Direct
Mammalian Phenotype (MP)abnormal telencephalon morphology0.0003503--Direct
Mammalian Phenotype (MP)vision/eye phenotype0.0005567--Direct
Mammalian Phenotype (MP)abnormal cerebellum morphology0.001008--Inherited
Mammalian Phenotype (MP)abnormal cell physiology0.00582--Inherited
Mammalian Phenotype (MP)renal/urinary system phenotype0.01265--Inherited
Mammalian Phenotype (MP)abnormal posterior eye segment morphology0.02301--Inherited
Mammalian Phenotype (MP)abnormal nervous system morphology0.03239--Inherited
Mammalian Phenotype (MP)abnormal somatic nervous system morphology0.06978--Inherited
Mammalian Phenotype (MP)abnormal hindbrain morphology0.1146--Inherited
Mammalian Phenotype (MP)abnormal sensory neuron morphology0.1264--Inherited
Mammalian Phenotype (MP)abnormal nephron morphology0.1542--Inherited
Mammalian Phenotype (MP)abnormal forebrain morphology0.2061--Inherited
Mammalian Phenotype (MP)abnormal hippocampus morphology0.3169--Inherited
Mammalian Phenotype (MP)abnormal nervous system physiology0.3961--Inherited
Mammalian Phenotype (MP)abnormal retinal layer morphology0.5772--Inherited
Mammalian Phenotype (MP)abnormal temporal lobe morphology0.6013--Inherited
Mammalian Phenotype (MP)abnormal renal/urinary system physiology0.6497--Inherited
Mammalian Phenotype (MP)abnormal kidney morphology0.8553--Inherited
Mammalian Phenotype (MP)homeostasis/metabolism phenotype0.9551--Inherited
Mammalian Phenotype (MP)nervous system phenotype0.0005163Least InformativeDirect
Mammalian Phenotype (MP)cellular phenotype0.02398Least InformativeInherited
Mammalian Phenotype (MP)abnormal eye morphology0.0002352Moderately InformativeDirect
Mammalian Phenotype (MP)abnormal neuron morphology0.0007154Moderately InformativeDirect
Mammalian Phenotype (MP)abnormal renal/urinary system morphology0.002305Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal brain morphology0.4209Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal somatic sensory system morphology0.481Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal cell migration0.0000093InformativeDirect
Mammalian Phenotype (MP)abnormal retinal neuronal layer morphology0.0001522InformativeDirect
Mammalian Phenotype (MP)abnormal metencephalon morphology0.001606InformativeInherited
Mammalian Phenotype (MP)abnormal response to injury0.005004InformativeInherited
Mammalian Phenotype (MP)abnormal kidney physiology0.0116InformativeInherited
Mammalian Phenotype (MP)abnormal neuron physiology0.03238InformativeInherited
Mammalian Phenotype (MP)abnormal renal tubule morphology0.05733InformativeInherited
Mammalian Phenotype (MP)abnormal cerebral hemisphere morphology0.09399InformativeInherited
Mammalian Phenotype (MP)abnormal limbic system morphology0.1225InformativeInherited
Mammalian Phenotype (MP)abnormal renal tubule epithelium morphology0.0000001486Highly InformativeDirect
Mammalian Phenotype (MP)abnormal amacrine cell morphology0.00002827Highly InformativeDirect
Mammalian Phenotype (MP)altered susceptibility to kidney reperfusion injury0.0001187Highly InformativeDirect
Mammalian Phenotype (MP)ectopic neuron0.0002252Highly InformativeDirect
Mammalian Phenotype (MP)abnormal neuronal migration0.0005583Highly InformativeDirect
Mammalian Phenotype (MP)abnormal cerebellar layer morphology0.5226Highly InformativeInherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

WP

Worm Phenotype (WP)

WP term FDR (all) SDWP (four levels) Annotation (direct or inherited)
Worm Phenotype (WP)embryonic lethal0--Direct
Worm Phenotype (WP)lethal0--Direct
Worm Phenotype (WP)fertility variant0--Direct
Worm Phenotype (WP)development variant0--Direct
Worm Phenotype (WP)morphology variant0--Direct
Worm Phenotype (WP)organism development variant0--Direct
Worm Phenotype (WP)organ system morphology variant0--Direct
Worm Phenotype (WP)organism morphology variant0--Direct
Worm Phenotype (WP)organ system physiology variant0--Direct
Worm Phenotype (WP)reproductive system physiology variant0--Direct
Worm Phenotype (WP)maternal sterile0--Direct
Worm Phenotype (WP)hermaphrodite sterile0--Direct
Worm Phenotype (WP)embryonic development variant0--Direct
Worm Phenotype (WP)hermaphrodite fertility variant0--Direct
Worm Phenotype (WP)hermaphrodite fertility reduced0--Direct
Worm Phenotype (WP)fertility reduced0--Direct
Worm Phenotype (WP)male nervous system morphology variant0.000000006532--Direct
Worm Phenotype (WP)vulva uterus connection defective0.000000008082--Direct
Worm Phenotype (WP)sexually dimorphic morphology variant0.0000001145--Direct
Worm Phenotype (WP)neuronal outgrowth variant0.0000003445--Direct
Worm Phenotype (WP)neuron development variant0.000007644--Direct
Worm Phenotype (WP)reproductive system development variant0.00007454--Direct
Worm Phenotype (WP)nervous system morphology variant0.0385--Inherited
Worm Phenotype (WP)physiology variant1--Inherited
Worm Phenotype (WP)sterile1--Inherited
Worm Phenotype (WP)cell development variant0.008362Least InformativeInherited
Worm Phenotype (WP)organ system development variant0.001104Moderately InformativeInherited
Worm Phenotype (WP)male morphology variant0.00000007746InformativeDirect
Worm Phenotype (WP)axon outgrowth variant0.0000002897InformativeDirect
Worm Phenotype (WP)sensillum morphology variant0.000003703InformativeDirect
Worm Phenotype (WP)anchor cell invasion variant0.000000005228Highly InformativeDirect
Worm Phenotype (WP)male ray morphology variant0.000000006532Highly InformativeDirect
Worm Phenotype (WP)axon guidance variant0.0000000382Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

FP

Fly Phenotype (FP)

FP term FDR (all) SDFP (four levels) Annotation (direct or inherited)
Fly Phenotype (FP)phenotype0--Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

FA

Fly Anatomy (FA)

FA term FDR (all) SDFA (four levels) Annotation (direct or inherited)
Fly Anatomy (FA)organism0--Direct
Fly Anatomy (FA)embryonic/larval nervous system0--Direct
Fly Anatomy (FA)adult nervous system0--Direct
Fly Anatomy (FA)organ system0--Direct
Fly Anatomy (FA)cell0--Direct
Fly Anatomy (FA)multicellular structure0--Direct
Fly Anatomy (FA)ipsilateral tract0.000009833--Direct
Fly Anatomy (FA)larval abdomen0.00001012--Direct
Fly Anatomy (FA)abdominal segment0.00006482--Direct
Fly Anatomy (FA)tract neuropil0.00008561--Direct
Fly Anatomy (FA)embryonic/larval salivary gland0.0002593--Direct
Fly Anatomy (FA)abdominal nerve0.0002996--Direct
Fly Anatomy (FA)neuron projection bundle0.0005029--Direct
Fly Anatomy (FA)gland0.001966--Inherited
Fly Anatomy (FA)foregut0.007004--Inherited
Fly Anatomy (FA)embryonic/larval central nervous system0.01446--Inherited
Fly Anatomy (FA)alimentary canal0.05397--Inherited
Fly Anatomy (FA)gut0.05534--Inherited
Fly Anatomy (FA)gut section0.06635--Inherited
Fly Anatomy (FA)neuropil0.08037--Inherited
Fly Anatomy (FA)organism subdivision0.1358--Inherited
Fly Anatomy (FA)anatomical structure1--Inherited
Fly Anatomy (FA)material anatomical entity1--Inherited
Fly Anatomy (FA)anterior-posterior subdivision of organism1--Inherited
Fly Anatomy (FA)larva0Least InformativeDirect
Fly Anatomy (FA)adult0Least InformativeDirect
Fly Anatomy (FA)nervous system0Least InformativeDirect
Fly Anatomy (FA)organ system subdivision0Least InformativeDirect
Fly Anatomy (FA)somatic cell0Least InformativeDirect
Fly Anatomy (FA)segment0.04279Least InformativeInherited
Fly Anatomy (FA)anatomical group0.07317Least InformativeInherited
Fly Anatomy (FA)multi-tissue structure0.0907Least InformativeInherited
Fly Anatomy (FA)tagma0.1543Least InformativeInherited
Fly Anatomy (FA)peripheral nervous system0Moderately InformativeDirect
Fly Anatomy (FA)neuron0Moderately InformativeDirect
Fly Anatomy (FA)abdomen0.0002677Moderately InformativeDirect
Fly Anatomy (FA)multi-cell-component structure0.0003158Moderately InformativeDirect
Fly Anatomy (FA)larval segment0.001785Moderately InformativeInherited
Fly Anatomy (FA)larval tagma0.005951Moderately InformativeInherited
Fly Anatomy (FA)ganglion0.008745Moderately InformativeInherited
Fly Anatomy (FA)central nervous system0.02119Moderately InformativeInherited
Fly Anatomy (FA)digestive system0.04913Moderately InformativeInherited
Fly Anatomy (FA)larval abdominal segment0.000003118InformativeDirect
Fly Anatomy (FA)ventral nerve cord0.00001677InformativeDirect
Fly Anatomy (FA)nerve0.0003484InformativeDirect
Fly Anatomy (FA)embryonic/larval digestive system0.02615InformativeInherited
Fly Anatomy (FA)tract0.1235InformativeInherited
Fly Anatomy (FA)fascicle0.00000006344Highly InformativeDirect
Fly Anatomy (FA)salivary gland0.0006077Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

ZA

Zebrafish Anatomy (ZA)

ZA term FDR (all) SDZA (four levels) Annotation (direct or inherited)
Zebrafish Anatomy (ZA)whole organism0--Direct
Zebrafish Anatomy (ZA)anatomical system0--Direct
Zebrafish Anatomy (ZA)anatomical group0--Direct
Zebrafish Anatomy (ZA)CaP motoneuron0.000003456--Direct
Zebrafish Anatomy (ZA)primary motor neuron0.00003187--Direct
Zebrafish Anatomy (ZA)neuron neural crest derived0.0001374--Direct
Zebrafish Anatomy (ZA)neuroectoderm0.0002479--Direct
Zebrafish Anatomy (ZA)primary neuron0.0008936--Direct
Zebrafish Anatomy (ZA)electrically signaling cell0.01855--Inherited
Zebrafish Anatomy (ZA)primary germ layer0.01956--Inherited
Zebrafish Anatomy (ZA)efferent neuron0.04574--Inherited
Zebrafish Anatomy (ZA)anatomical structure1--Inherited
Zebrafish Anatomy (ZA)electrically responsive cell1--Inherited
Zebrafish Anatomy (ZA)nervous system0.4303Least InformativeInherited
Zebrafish Anatomy (ZA)cell0.5755Least InformativeInherited
Zebrafish Anatomy (ZA)electrically active cell0.07059Moderately InformativeInherited
Zebrafish Anatomy (ZA)portion of tissue0.4492Moderately InformativeInherited
Zebrafish Anatomy (ZA)neuron0.01855InformativeInherited
Zebrafish Anatomy (ZA)ectoderm0.001398Highly InformativeInherited
Zebrafish Anatomy (ZA)motor neuron0.002356Highly InformativeInherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

XA

Xenopus Anatomy (XA)

XA term FDR (all) SDXA (four levels) Annotation (direct or inherited)
Xenopus ANatomical entity (XAN)anatomical structure0--Direct
Xenopus ANatomical entity (XAN)cranial placode0.00000002546--Direct
Xenopus ANatomical entity (XAN)otic placode0.000000695--Direct
Xenopus ANatomical entity (XAN)neural crest0.0000008218--Direct
Xenopus ANatomical entity (XAN)liver primordium0.0005049--Direct
Xenopus ANatomical entity (XAN)branchial arch0.0006032--Direct
Xenopus ANatomical entity (XAN)pharyngeal arch0.05039--Inherited
Xenopus ANatomical entity (XAN)anatomical region0.2014--Inherited
Xenopus ANatomical entity (XAN)organism subdivision0.2537--Inherited
Xenopus ANatomical entity (XAN)anatomical group0.3093--Inherited
Xenopus ANatomical entity (XAN)central nervous system0.4244--Inherited
Xenopus ANatomical entity (XAN)multicellular anatomical structure0.4719--Inherited
Xenopus ANatomical entity (XAN)primary germ layer0.6303--Inherited
Xenopus ANatomical entity (XAN)head region0.8001--Inherited
Xenopus ANatomical entity (XAN)anatomical system1--Inherited
Xenopus ANatomical entity (XAN)whole organism1--Inherited
Xenopus ANatomical entity (XAN)nervous system0.5352Least InformativeInherited
Xenopus ANatomical entity (XAN)embryo0.5928Least InformativeInherited
Xenopus ANatomical entity (XAN)head0.7486Least InformativeInherited
Xenopus ANatomical entity (XAN)tissue1Least InformativeInherited
Xenopus ANatomical entity (XAN)sensory system0.0001823Moderately InformativeDirect
Xenopus ANatomical entity (XAN)multi-tissue structure0.005826Moderately InformativeInherited
Xenopus ANatomical entity (XAN)embryonic structure0.01673Moderately InformativeInherited
Xenopus ANatomical entity (XAN)ectoderm0.1834Moderately InformativeInherited
Xenopus ANatomical entity (XAN)alimentary system0.8011Moderately InformativeInherited
Xenopus ANatomical entity (XAN)neuroectoderm0.00007244InformativeDirect
Xenopus ANatomical entity (XAN)pharyngeal region0.1469InformativeInherited
Xenopus ANatomical entity (XAN)vestibuloauditory system0.7439InformativeInherited
Xenopus ANatomical entity (XAN)periocular region0.00003624Highly InformativeDirect
Xenopus ANatomical entity (XAN)cranial neural crest0.0001131Highly InformativeDirect
Xenopus ANatomical entity (XAN)presumptive midbrain-hindbrain boundary0.0005211Highly InformativeDirect
Xenopus ANatomical entity (XAN)primordium0.1215Highly InformativeInherited
Xenopus ANatomical entity (XAN)neurogenic placode1Highly InformativeInherited
 
XA term FDR (all) SDXA (four levels) Annotation (direct or inherited)
Xenopus DEvelopment stage (XDE)NF stage0--Direct

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EC

Enzyme Commission (EC)

EC term FDR (all) SDEC (four levels) Annotation (direct or inherited)
Enzyme Commission (EC)Transferring phosphorus-containing groups0--Direct
Enzyme Commission (EC)Protein-tyrosine kinases0--Direct
Enzyme Commission (EC)Transferases0Least InformativeDirect
Enzyme Commission (EC)Receptor protein-tyrosine kinase0Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

CD

CTD Diseases (CD)

CD term FDR (all) SDCD (four levels) Annotation (direct or inherited)
CTD Diseases (CD)Genital Neoplasms, Female0.01197--Inherited
CTD Diseases (CD)Uterine Diseases0.03438--Inherited
CTD Diseases (CD)Uterine Neoplasms0.0793--Inherited
CTD Diseases (CD)Neoplasms by Site0.2152--Inherited
CTD Diseases (CD)Male Urogenital Diseases0.2449--Inherited
CTD Diseases (CD)Pathologic Processes0.4957--Inherited
CTD Diseases (CD)Female Urogenital Diseases0.9063--Inherited
CTD Diseases (CD)Female Urogenital Diseases and Pregnancy Complications0.0401Least InformativeInherited
CTD Diseases (CD)Neoplasms0.518Least InformativeInherited
CTD Diseases (CD)Pathological Conditions, Signs and Symptoms0.8916Least InformativeInherited
CTD Diseases (CD)Urogenital Neoplasms0.1094Moderately InformativeInherited
CTD Diseases (CD)Gliosis0.00001463InformativeDirect
CTD Diseases (CD)Genital Diseases, Female0.01384InformativeInherited
CTD Diseases (CD)Endometrial Neoplasms0.0006151Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

CC

CTD Chemicals (CC)

CC term FDR (all) SDCC (four levels) Annotation (direct or inherited)
CTD Chemicals (CC)Heterocyclic Compounds, Fused-Ring0--Direct
CTD Chemicals (CC)Carboxylic Acids0--Direct
CTD Chemicals (CC)Heterocyclic Compounds0--Direct
CTD Chemicals (CC)Heterocyclic Compounds, 2-Ring0--Direct
CTD Chemicals (CC)Inorganic Chemicals0--Direct
CTD Chemicals (CC)Organic Chemicals0--Direct
CTD Chemicals (CC)Polycyclic Compounds0--Direct
CTD Chemicals (CC)Estradiol0.000008368--Direct
CTD Chemicals (CC)Gonadal Hormones0.00001898--Direct
CTD Chemicals (CC)Hormones, Hormone Substitutes, and Hormone Antagonists0.0000301--Direct
CTD Chemicals (CC)O,O-diethyl O-3,5,6-trichloro-2-pyridyl phosphate0.0006912--Direct
CTD Chemicals (CC)Pharmacologic Actions0.002084--Inherited
CTD Chemicals (CC)Physiological Effects of Drugs0.005046--Inherited
CTD Chemicals (CC)Estradiol Congeners0.1293--Inherited
CTD Chemicals (CC)Organothiophosphates0.2827--Inherited
CTD Chemicals (CC)Heterocyclic Compounds, 1-Ring0.6585--Inherited
CTD Chemicals (CC)Estrenes1--Inherited
CTD Chemicals (CC)Hormones1--Inherited
CTD Chemicals (CC)Steroids1--Inherited
CTD Chemicals (CC)Biological Factors0.00006471Least InformativeDirect
CTD Chemicals (CC)Fused-Ring Compounds0.001635Least InformativeInherited
CTD Chemicals (CC)Chemical Actions and Uses0.005729Least InformativeInherited
CTD Chemicals (CC)Sulfur Compounds0.01686Least InformativeInherited
CTD Chemicals (CC)Estranes0.04735Moderately InformativeInherited
CTD Chemicals (CC)Organophosphorus Compounds0.5263Moderately InformativeInherited
CTD Chemicals (CC)Gonadal Steroid Hormones1Moderately InformativeInherited
CTD Chemicals (CC)Azepines0.0005928InformativeDirect
CTD Chemicals (CC)Organophosphates0.06411InformativeInherited
CTD Chemicals (CC)Organothiophosphorus Compounds0.1127InformativeInherited
CTD Chemicals (CC)Chlorpyrifos0.05819Highly InformativeInherited

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Distribution on sTOL

Plot distribution on species Tree Of Life (sTOL) for this domain, i.e., present or absent across genomes/tips
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