RuvA domain 2-like superfamily

DO

Disease Ontology (DO)

	DO term	FDR (all)	SDDO (four levels)	Annotation (direct or inherited)
Disease Ontology (DO)	disease of anatomical entity	0.1453	--	Inherited
Disease Ontology (DO)	hematopoietic system disease	0.00002274	Moderately Informative	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

HP

Human Phenotype (HP)

	HP term	FDR (all)	SDHP (four levels)	Annotation (direct or inherited)
Phenotypic Abnormality (PA)	Abnormality of body height	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of head or neck	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of skull size	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of the face	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of the forehead	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of the nervous system	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of the skeletal system	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of the skin	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of the hand	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of finger	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of the hip joint	0	--	Direct
Phenotypic Abnormality (PA)	Growth delay	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of the foot	0	--	Direct
Phenotypic Abnormality (PA)	Morphological abnormality of the central nervous system	0	--	Direct
Phenotypic Abnormality (PA)	Hip dislocation	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of the forearm	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of the hip bone	0	--	Direct
Phenotypic Abnormality (PA)	Aplasia/hypoplasia involving the skeleton	0	--	Direct
Phenotypic Abnormality (PA)	Abnormal axial skeleton morphology	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of the curvature of the vertebral column	0	--	Direct
Phenotypic Abnormality (PA)	Abnormal digit morphology	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of facial skeleton	0	--	Direct
Phenotypic Abnormality (PA)	Abnormal appendicular skeleton morphology	0	--	Direct
Phenotypic Abnormality (PA)	Neurodevelopmental delay	0	--	Direct
Phenotypic Abnormality (PA)	Lower extremity joint dislocation	0	--	Direct
Phenotypic Abnormality (PA)	Abnormal ear morphology	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of limb bone	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of forearm bone	0	--	Direct
Phenotypic Abnormality (PA)	Abnormal trachea morphology	0.00002296	--	Direct
Phenotypic Abnormality (PA)	Limb undergrowth	0.0001206	--	Direct
Phenotypic Abnormality (PA)	Abnormality of globe size	0.0002106	--	Direct
Phenotypic Abnormality (PA)	Abnormal neural tube morphology	0.0004931	--	Direct
Phenotypic Abnormality (PA)	Abnormal shape of the frontal region	0.0006305	--	Direct
Phenotypic Abnormality (PA)	Hypogonadism	0.0009023	--	Direct
Phenotypic Abnormality (PA)	Aplasia/Hypoplasia affecting the eye	0.0009111	--	Direct
Phenotypic Abnormality (PA)	Abnormality of the spinal cord	0.003083	--	Inherited
Phenotypic Abnormality (PA)	Puberty and gonadal disorders	0.005346	--	Inherited
Phenotypic Abnormality (PA)	Abnormality of the palpebral fissures	0.005415	--	Inherited
Phenotypic Abnormality (PA)	Abnormal respiratory system morphology	0.02225	--	Inherited
Phenotypic Abnormality (PA)	Abnormality of the ocular adnexa	0.03614	--	Inherited
Phenotypic Abnormality (PA)	Abnormality of the genital system	0.04623	--	Inherited
Phenotypic Abnormality (PA)	Abnormal eye morphology	0.1351	--	Inherited
Phenotypic Abnormality (PA)	Abnormality of the orbital region	0.1807	--	Inherited
Phenotypic Abnormality (PA)	Neural tube defect	1	--	Inherited
Phenotypic Abnormality (PA)	Abnormality of the head	0	Least Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of the integument	0	Least Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of skeletal morphology	0	Least Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of nervous system physiology	0	Least Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of nervous system morphology	0	Least Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of limbs	0	Least Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of the genitourinary system	0.1634	Least Informative	Inherited
Phenotypic Abnormality (PA)	Abnormality of the eye	0.253	Least Informative	Inherited
Phenotypic Abnormality (PA)	Abnormality of the ear	0	Moderately Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of the vertebral column	0	Moderately Informative	Direct
Phenotypic Abnormality (PA)	Abnormal skull morphology	0	Moderately Informative	Direct
Phenotypic Abnormality (PA)	Abnormal joint morphology	0	Moderately Informative	Direct
Phenotypic Abnormality (PA)	Growth abnormality	0	Moderately Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of limb bone morphology	0	Moderately Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of the lower limb	0	Moderately Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of the upper limb	0	Moderately Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of skin morphology	0	Moderately Informative	Direct
Phenotypic Abnormality (PA)	Neurodevelopmental abnormality	0	Moderately Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of the endocrine system	0.03233	Moderately Informative	Inherited
Phenotypic Abnormality (PA)	Abnormal ocular adnexa morphology	0.03471	Moderately Informative	Inherited
Phenotypic Abnormality (PA)	Abnormality of the respiratory system	0.07072	Moderately Informative	Inherited
Phenotypic Abnormality (PA)	Abnormality of the outer ear	0	Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of the nose	0	Informative	Direct
Phenotypic Abnormality (PA)	Global developmental delay	0	Informative	Direct
Phenotypic Abnormality (PA)	Joint dislocation	0	Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of pelvic girdle bone morphology	0	Informative	Direct
Phenotypic Abnormality (PA)	Scoliosis	0	Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of the calvaria	0	Informative	Direct
Phenotypic Abnormality (PA)	Short stature	0	Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of the synovia	0	Informative	Direct
Phenotypic Abnormality (PA)	Abnormal finger phalanx morphology	0	Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of long bone morphology	0	Informative	Direct
Phenotypic Abnormality (PA)	Abnormal lower limb bone morphology	0	Informative	Direct
Phenotypic Abnormality (PA)	Abnormal upper limb bone morphology	0	Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of lower limb joint	0	Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of the upper respiratory tract	0.001049	Informative	Inherited
Phenotypic Abnormality (PA)	Abnormality of reproductive system physiology	0.003127	Informative	Inherited
Phenotypic Abnormality (PA)	Abnormal eyelid morphology	0.02274	Informative	Inherited
Phenotypic Abnormality (PA)	Aplasia/hypoplasia of the extremities	0.04414	Informative	Inherited
Phenotypic Abnormality (PA)	Abnormality of the radius	0	Highly Informative	Direct
Phenotypic Abnormality (PA)	Spinal dysraphism	0.00004662	Highly Informative	Direct
Phenotypic Abnormality (PA)	Microphthalmia	0.0001264	Highly Informative	Direct
Phenotypic Abnormality (PA)	Abnormal size of the palpebral fissures	0.0001921	Highly Informative	Direct
Phenotypic Abnormality (PA)	Abnormal tracheobronchial morphology	0.0002685	Highly Informative	Direct
Phenotypic Abnormality (PA)	Abnormality of calvarial morphology	0.6722	Highly Informative	Inherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

MP

Mouse Phenotype (MP)

	MP term	FDR (all)	SDMP (four levels)	Annotation (direct or inherited)
Mammalian Phenotype (MP)	abnormal survival	0	--	Direct
Mammalian Phenotype (MP)	mortality/aging	0	Least Informative	Direct
Mammalian Phenotype (MP)	cellular phenotype	0.04893	Least Informative	Inherited
Mammalian Phenotype (MP)	abnormal cell morphology	0.0006111	Moderately Informative	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

WP

Worm Phenotype (WP)

	WP term	FDR (all)	SDWP (four levels)	Annotation (direct or inherited)
Worm Phenotype (WP)	postembryonic development variant	0	--	Direct
Worm Phenotype (WP)	embryonic lethal	0	--	Direct
Worm Phenotype (WP)	lethal	0	--	Direct
Worm Phenotype (WP)	fertility variant	0	--	Direct
Worm Phenotype (WP)	development variant	0	--	Direct
Worm Phenotype (WP)	morphology variant	0	--	Direct
Worm Phenotype (WP)	organism development variant	0	--	Direct
Worm Phenotype (WP)	organism morphology variant	0	--	Direct
Worm Phenotype (WP)	organ system physiology variant	0	--	Direct
Worm Phenotype (WP)	reproductive system physiology variant	0	--	Direct
Worm Phenotype (WP)	maternal sterile	0	--	Direct
Worm Phenotype (WP)	hermaphrodite sterile	0	--	Direct
Worm Phenotype (WP)	embryonic development variant	0	--	Direct
Worm Phenotype (WP)	hermaphrodite fertility variant	0	--	Direct
Worm Phenotype (WP)	hermaphrodite fertility reduced	0	--	Direct
Worm Phenotype (WP)	fertility reduced	0	--	Direct
Worm Phenotype (WP)	physiology variant	1	--	Inherited
Worm Phenotype (WP)	sterile	1	--	Inherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

ZA

Zebrafish Anatomy (ZA)

	ZA term	FDR (all)	SDZA (four levels)	Annotation (direct or inherited)
Zebrafish Anatomy (ZA)	whole organism	0	--	Direct
Zebrafish Anatomy (ZA)	anatomical structure	1	--	Inherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

XA

Xenopus Anatomy (XA)

	XA term	FDR (all)	SDXA (four levels)	Annotation (direct or inherited)
Xenopus ANatomical entity (XAN)	anatomical structure	0	--	Direct
Xenopus ANatomical entity (XAN)	anatomical group	0	--	Direct
Xenopus ANatomical entity (XAN)	organism subdivision	0	--	Direct
Xenopus ANatomical entity (XAN)	compound organ	0	--	Direct
Xenopus ANatomical entity (XAN)	anatomical region	0	--	Direct
Xenopus ANatomical entity (XAN)	multicellular anatomical structure	0	--	Direct
Xenopus ANatomical entity (XAN)	whole organism	1	--	Inherited
Xenopus ANatomical entity (XAN)	cavitated compound organ	0	Least Informative	Direct

	XA term	FDR (all)	SDXA (four levels)	Annotation (direct or inherited)
Xenopus DEvelopment stage (XDE)	NF stage	0	--	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

AP

Arabidopsis Plant Ontology (AP)

	AP term	FDR (all)	SDAP (four levels)	Annotation (direct or inherited)
Plant ANatomical entity (PAN)	plant cell	0	--	Direct
Plant ANatomical entity (PAN)	shoot system	0	--	Direct
Plant ANatomical entity (PAN)	reproductive shoot system	0	--	Direct
Plant ANatomical entity (PAN)	collective plant structure	0	--	Direct
Plant ANatomical entity (PAN)	plant structure	1	--	Inherited
Plant ANatomical entity (PAN)	collective plant organ structure	1	--	Inherited
Plant ANatomical entity (PAN)	flower	0	Least Informative	Direct

	AP term	FDR (all)	SDAP (four levels)	Annotation (direct or inherited)
Plant structure DEvelopment stage (PDE)	flowering stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	collective plant organ structure development stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	reproductive shoot system development stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	flower development stage	1	--	Inherited
Plant structure DEvelopment stage (PDE)	shoot system development stage	1	--	Inherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

EC

Enzyme Commission (EC)

	EC term	FDR (all)	SDEC (four levels)	Annotation (direct or inherited)
Enzyme Commission (EC)	Diadenylate cyclase	0	--	Direct
Enzyme Commission (EC)	Acting on ATP; involved in cellular and subcellular movement	0	--	Direct
Enzyme Commission (EC)	Forming phosphoric ester bonds	0	--	Direct
Enzyme Commission (EC)	DNA ligase (NAD(+))	0	--	Direct
Enzyme Commission (EC)	Transferases	1	--	Inherited
Enzyme Commission (EC)	Hydrolases	0	Least Informative	Direct
Enzyme Commission (EC)	Transferring phosphorus-containing groups	1	Least Informative	Inherited
Enzyme Commission (EC)	Acting on acid anhydrides	0	Moderately Informative	Direct
Enzyme Commission (EC)	Ligases	0	Moderately Informative	Direct
Enzyme Commission (EC)	Nucleotidyltransferases	1	Moderately Informative	Inherited
Enzyme Commission (EC)	DNA helicase	0	Informative	Direct
Enzyme Commission (EC)	Forming phosphoric ester bonds	1	Highly Informative	Inherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

CD

CTD Diseases (CD)

	CD term	FDR (all)	SDCD (four levels)	Annotation (direct or inherited)
CTD Diseases (CD)	Congenital, Hereditary, and Neonatal Diseases and Abnormalities	0	--	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

CC

CTD Chemicals (CC)

	CC term	FDR (all)	SDCC (four levels)	Annotation (direct or inherited)
CTD Chemicals (CC)	Heterocyclic Compounds, Fused-Ring	0	--	Direct
CTD Chemicals (CC)	Heterocyclic Compounds	0	--	Direct
CTD Chemicals (CC)	Heterocyclic Compounds, 1-Ring	0	--	Direct
CTD Chemicals (CC)	Heterocyclic Compounds, 2-Ring	0	--	Direct
CTD Chemicals (CC)	Hydrocarbons	0	--	Direct
CTD Chemicals (CC)	Hydrocarbons, Aromatic	0	--	Direct
CTD Chemicals (CC)	Hydrocarbons, Cyclic	0	--	Direct
CTD Chemicals (CC)	Inorganic Chemicals	0	--	Direct
CTD Chemicals (CC)	Organic Chemicals	0	--	Direct
CTD Chemicals (CC)	Amides	0	Least Informative	Direct
CTD Chemicals (CC)	Azoles	0	Least Informative	Direct
CTD Chemicals (CC)	Indoles	0	Least Informative	Direct
CTD Chemicals (CC)	Sulfur Compounds	0	Least Informative	Direct

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Distribution on sTOL

Plot distribution on species Tree Of Life (sTOL) for this domain, i.e., present or absent across genomes/tips

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RuvA domain 2-like superfamily