dcGO - A comprehensive domain-centric ontology resource for post-genomic research on functions, phenotypes, diseases and more   
  
  

Tetraspanin superfamily

Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All alpha proteins [ 46456] (284)
Fold:   Tetraspanin [ 48651]
Superfamily:   Tetraspanin [ 48652]
Families:   Tetraspanin [ 48653]

MP

Mouse Phenotype (MP)

MP term FDR (all) SDMP (four levels) Annotation (direct or inherited)
Mammalian Phenotype (MP)abnormal retinal outer nuclear layer thickness0.0003476--Direct
Mammalian Phenotype (MP)abnormal retinal outer nuclear layer morphology0.001177--Inherited
Mammalian Phenotype (MP)abnormal retina morphology0.02611--Inherited
Mammalian Phenotype (MP)abnormal ocular fundus morphology0.02713--Inherited
Mammalian Phenotype (MP)abnormal posterior eye segment morphology0.03511--Inherited
Mammalian Phenotype (MP)abnormal cardiovascular system morphology0.2125--Inherited
Mammalian Phenotype (MP)vision/eye phenotype0.2229--Inherited
Mammalian Phenotype (MP)abnormal retinal layer morphology0.3202--Inherited
Mammalian Phenotype (MP)cardiovascular system phenotype0.3841Least InformativeInherited
Mammalian Phenotype (MP)abnormal blood vessel morphology0.05046Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal eye morphology0.1882Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal retinal neuronal layer morphology0.01651InformativeInherited
Mammalian Phenotype (MP)abnormal retinal vasculature morphology0.0002835Highly InformativeDirect
Mammalian Phenotype (MP)thin retinal outer nuclear layer0.0003343Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

WP

Worm Phenotype (WP)

WP term FDR (all) SDWP (four levels) Annotation (direct or inherited)
Worm Phenotype (WP)lethal0--Direct
Worm Phenotype (WP)fertility variant0--Direct
Worm Phenotype (WP)development variant0--Direct
Worm Phenotype (WP)organism development variant0--Direct
Worm Phenotype (WP)organ system physiology variant0--Direct
Worm Phenotype (WP)reproductive system physiology variant0--Direct
Worm Phenotype (WP)fertility reduced0--Direct
Worm Phenotype (WP)physiology variant1--Inherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

FA

Fly Anatomy (FA)

FA term FDR (all) SDFA (four levels) Annotation (direct or inherited)
Fly Anatomy (FA)multicellular structure0--Direct
Fly Anatomy (FA)proneural cluster0.0003586--Direct
Fly Anatomy (FA)anlage0.001688--Inherited
Fly Anatomy (FA)portion of tissue0.3553--Inherited
Fly Anatomy (FA)somatic cell0.7154--Inherited
Fly Anatomy (FA)developing material anatomical entity0.7521--Inherited
Fly Anatomy (FA)anatomical structure1--Inherited
Fly Anatomy (FA)material anatomical entity1--Inherited
Fly Anatomy (FA)cell0.8274Least InformativeInherited
Fly Anatomy (FA)somatic precursor cell0.3539Moderately InformativeInherited
Fly Anatomy (FA)sensory mother cell0.0003586Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

ZA

Zebrafish Anatomy (ZA)

ZA term FDR (all) SDZA (four levels) Annotation (direct or inherited)
Zebrafish Anatomy (ZA)whole organism0--Direct
Zebrafish Anatomy (ZA)anatomical structure1--Inherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

XA

Xenopus Anatomy (XA)

XA term FDR (all) SDXA (four levels) Annotation (direct or inherited)
Xenopus ANatomical entity (XAN)anatomical structure0--Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

CC

CTD Chemicals (CC)

CC term FDR (all) SDCC (four levels) Annotation (direct or inherited)
CTD Chemicals (CC)Hydrocarbons0--Direct
CTD Chemicals (CC)Hydrocarbons, Cyclic0--Direct
CTD Chemicals (CC)Organic Chemicals0--Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

Distribution on sTOL

Plot distribution on species Tree Of Life (sTOL) for this domain, i.e., present or absent across genomes/tips
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