Sm-like ribonucleoproteins superfamily

HP

Human Phenotype (HP)

	HP term	FDR (all)	SDHP (four levels)	Annotation (direct or inherited)
Mode of Inheritance (MI)	Autosomal dominant inheritance	0	Least Informative	Direct

	HP term	FDR (all)	SDHP (four levels)	Annotation (direct or inherited)
Phenotypic Abnormality (PA)	Abnormality of head or neck	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of the face	0	--	Direct
Phenotypic Abnormality (PA)	Abnormality of the head	0	Least Informative	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

WP

Worm Phenotype (WP)

	WP term	FDR (all)	SDWP (four levels)	Annotation (direct or inherited)
Worm Phenotype (WP)	embryonic lethal	0	--	Direct
Worm Phenotype (WP)	lethal	0	--	Direct
Worm Phenotype (WP)	fertility variant	0	--	Direct
Worm Phenotype (WP)	development variant	0	--	Direct
Worm Phenotype (WP)	morphology variant	0	--	Direct
Worm Phenotype (WP)	organism development variant	0	--	Direct
Worm Phenotype (WP)	organ system physiology variant	0	--	Direct
Worm Phenotype (WP)	reproductive system physiology variant	0	--	Direct
Worm Phenotype (WP)	embryonic development variant	0	--	Direct
Worm Phenotype (WP)	hermaphrodite fertility variant	0	--	Direct
Worm Phenotype (WP)	fertility reduced	0	--	Direct
Worm Phenotype (WP)	intestinal development variant	0.00000000000004641	--	Direct
Worm Phenotype (WP)	multivulva	0.0000000000007607	--	Direct
Worm Phenotype (WP)	vulval cell induction increased	0.000000000001097	--	Direct
Worm Phenotype (WP)	cell proliferation variant	0.000000000001965	--	Direct
Worm Phenotype (WP)	cell number variant	0.000000000001973	--	Direct
Worm Phenotype (WP)	vulval cell induction variant	0.000000000005969	--	Direct
Worm Phenotype (WP)	vulva cell fate specification variant	0.00000000001477	--	Direct
Worm Phenotype (WP)	cell type morphology variant	0.00000001453	--	Direct
Worm Phenotype (WP)	meiotic progression during oogenesis variant	0.00000001465	--	Direct
Worm Phenotype (WP)	excess intestinal cells	0.00000009596	--	Direct
Worm Phenotype (WP)	protein subcellular localization variant	0.0000001754	--	Direct
Worm Phenotype (WP)	response to bacteria variant	0.0000002385	--	Direct
Worm Phenotype (WP)	organ system development variant	0.0000008618	--	Direct
Worm Phenotype (WP)	gonad morphology variant	0.000001105	--	Direct
Worm Phenotype (WP)	recycling endosome localization variant	0.00000138	--	Direct
Worm Phenotype (WP)	endosome localization variant	0.000001474	--	Direct
Worm Phenotype (WP)	germ cell physiology variant	0.000002637	--	Direct
Worm Phenotype (WP)	receptor mediated endocytosis defective	0.000003819	--	Direct
Worm Phenotype (WP)	hermaphrodite physiology variant	0.00000666	--	Direct
Worm Phenotype (WP)	sexually dimorphic physiology variant	0.000007428	--	Direct
Worm Phenotype (WP)	recycling endosome morphology variant	0.00001101	--	Direct
Worm Phenotype (WP)	endosome morphology variant	0.00001348	--	Direct
Worm Phenotype (WP)	vesicle morphology variant	0.00002189	--	Direct
Worm Phenotype (WP)	behavior variant	0.00002453	--	Direct
Worm Phenotype (WP)	programmed cell death variant	0.00007829	--	Direct
Worm Phenotype (WP)	transgene expression variant	0.000267	--	Direct
Worm Phenotype (WP)	locomotion variant	0.0003548	--	Direct
Worm Phenotype (WP)	gametogenesis variant	0.0004473	--	Direct
Worm Phenotype (WP)	organism pigmentation variant	0.0006898	--	Direct
Worm Phenotype (WP)	gene expression variant	0.001202	--	Inherited
Worm Phenotype (WP)	vesicle trafficking variant	0.002188	--	Inherited
Worm Phenotype (WP)	cell death variant	0.005855	--	Inherited
Worm Phenotype (WP)	meiotic progression prophase variant	0.008565	--	Inherited
Worm Phenotype (WP)	meiosis variant	0.05709	--	Inherited
Worm Phenotype (WP)	oogenesis variant	0.05914	--	Inherited
Worm Phenotype (WP)	protein metabolism variant	0.06951	--	Inherited
Worm Phenotype (WP)	cell component morphology variant	0.15	--	Inherited
Worm Phenotype (WP)	no germ line	0.2287	--	Inherited
Worm Phenotype (WP)	no differentiated gametes	0.2401	--	Inherited
Worm Phenotype (WP)	growth variant	0.2976	--	Inherited
Worm Phenotype (WP)	germ cell compartment morphology variant	0.3304	--	Inherited
Worm Phenotype (WP)	organism homeostasis metabolism variant	0.484	--	Inherited
Worm Phenotype (WP)	organism physiology variant	0.5054	--	Inherited
Worm Phenotype (WP)	chemical response variant	0.9659	--	Inherited
Worm Phenotype (WP)	physiology variant	1	--	Inherited
Worm Phenotype (WP)	cell morphology variant	0.0000007545	Least Informative	Direct
Worm Phenotype (WP)	cell development variant	0.000001829	Least Informative	Direct
Worm Phenotype (WP)	organism behavior variant	0.00002241	Least Informative	Direct
Worm Phenotype (WP)	cell physiology variant	0.003547	Least Informative	Inherited
Worm Phenotype (WP)	organism metabolism processing variant	0.005205	Least Informative	Inherited
Worm Phenotype (WP)	organ system morphology variant	0.00882	Least Informative	Inherited
Worm Phenotype (WP)	organism environmental stimulus response variant	0.01013	Least Informative	Inherited
Worm Phenotype (WP)	germ cell morphology variant	0.00000000000835	Moderately Informative	Direct
Worm Phenotype (WP)	germ cell development variant	0.000000004376	Moderately Informative	Direct
Worm Phenotype (WP)	pattern of transgene expression variant	0.000007067	Moderately Informative	Direct
Worm Phenotype (WP)	endocytic transport variant	0.00003671	Moderately Informative	Direct
Worm Phenotype (WP)	early embryonic lethal	0.00004781	Moderately Informative	Direct
Worm Phenotype (WP)	apoptosis variant	0.00005108	Moderately Informative	Direct
Worm Phenotype (WP)	cell cycle variant	0.0001688	Moderately Informative	Direct
Worm Phenotype (WP)	reproductive system morphology variant	0.0002007	Moderately Informative	Direct
Worm Phenotype (WP)	feeding behavior variant	0.001112	Moderately Informative	Inherited
Worm Phenotype (WP)	protein expression variant	0.001994	Moderately Informative	Inherited
Worm Phenotype (WP)	cell division variant	0.003015	Moderately Informative	Inherited
Worm Phenotype (WP)	reproductive system development variant	0.004946	Moderately Informative	Inherited
Worm Phenotype (WP)	metabolic pathway variant	0.3098	Moderately Informative	Inherited
Worm Phenotype (WP)	movement variant	0.3188	Moderately Informative	Inherited
Worm Phenotype (WP)	organism stress response variant	0.3653	Moderately Informative	Inherited
Worm Phenotype (WP)	germ cell differentiation variant	0.3822	Moderately Informative	Inherited
Worm Phenotype (WP)	cell homeostasis metabolism variant	0.6652	Moderately Informative	Inherited
Worm Phenotype (WP)	cell number increased	0.00000000000008558	Informative	Direct
Worm Phenotype (WP)	germ cell cytoplasmic morphology variant	0.000000006285	Informative	Direct
Worm Phenotype (WP)	pachytene progression during oogenesis variant	0.000000008499	Informative	Direct
Worm Phenotype (WP)	avoids bacterial lawn	0.00000001064	Informative	Direct
Worm Phenotype (WP)	sick	0.00000001305	Informative	Direct
Worm Phenotype (WP)	germ cell compartment expansion variant	0.0000001262	Informative	Direct
Worm Phenotype (WP)	alimentary system development variant	0.0000001904	Informative	Direct
Worm Phenotype (WP)	life span variant	0.000005063	Informative	Direct
Worm Phenotype (WP)	vesicle organization variant	0.00002564	Informative	Direct
Worm Phenotype (WP)	endocytic transport defect	0.00003195	Informative	Direct
Worm Phenotype (WP)	cell fate specification variant	0.00003744	Informative	Direct
Worm Phenotype (WP)	brood size variant	0.000116	Informative	Direct
Worm Phenotype (WP)	vulva development variant	0.0002557	Informative	Direct
Worm Phenotype (WP)	pigmentation variant	0.001009	Informative	Inherited
Worm Phenotype (WP)	cell stress response variant	0.001775	Informative	Inherited
Worm Phenotype (WP)	pattern protein expression variant	0.002827	Informative	Inherited
Worm Phenotype (WP)	cell component localization variant	0.02806	Informative	Inherited
Worm Phenotype (WP)	organism temperature response variant	0.0288	Informative	Inherited
Worm Phenotype (WP)	oocyte physiology variant	0.1912	Informative	Inherited
Worm Phenotype (WP)	cell proliferation increased	0	Highly Informative	Direct
Worm Phenotype (WP)	embryonic arrest	0.00000000005498	Highly Informative	Direct
Worm Phenotype (WP)	RAB-11 recycling endosome localization variant	0.000001333	Highly Informative	Direct
Worm Phenotype (WP)	reduced brood size	0.00005035	Highly Informative	Direct
Worm Phenotype (WP)	unfolded protein response variant	0.00005388	Highly Informative	Direct
Worm Phenotype (WP)	organism heat response variant	0.0001439	Highly Informative	Direct
Worm Phenotype (WP)	no oocytes	0.0001662	Highly Informative	Direct
Worm Phenotype (WP)	cell secretion variant	0.0002073	Highly Informative	Direct
Worm Phenotype (WP)	pachytene region organization variant	0.0002908	Highly Informative	Direct
Worm Phenotype (WP)	P granule abnormal	0.0005741	Highly Informative	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

FP

Fly Phenotype (FP)

	FP term	FDR (all)	SDFP (four levels)	Annotation (direct or inherited)
Fly Phenotype (FP)	phenotype	0	--	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

FA

Fly Anatomy (FA)

	FA term	FDR (all)	SDFA (four levels)	Annotation (direct or inherited)
Fly Anatomy (FA)	organism	0	--	Direct
Fly Anatomy (FA)	multicellular structure	0	--	Direct
Fly Anatomy (FA)	anatomical structure	1	--	Inherited
Fly Anatomy (FA)	material anatomical entity	1	--	Inherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

XA

Xenopus Anatomy (XA)

	XA term	FDR (all)	SDXA (four levels)	Annotation (direct or inherited)
Xenopus ANatomical entity (XAN)	head region	0	--	Direct
Xenopus ANatomical entity (XAN)	anatomical structure	0	--	Direct
Xenopus ANatomical entity (XAN)	anatomical group	0	--	Direct
Xenopus ANatomical entity (XAN)	organism subdivision	0	--	Direct
Xenopus ANatomical entity (XAN)	anatomical region	0	--	Direct
Xenopus ANatomical entity (XAN)	multicellular anatomical structure	0	--	Direct
Xenopus ANatomical entity (XAN)	egg	0.000003706	--	Direct
Xenopus ANatomical entity (XAN)	cell	0.0001312	--	Direct
Xenopus ANatomical entity (XAN)	gamete	0.0002129	--	Direct
Xenopus ANatomical entity (XAN)	genital system	0.01005	--	Inherited
Xenopus ANatomical entity (XAN)	anatomical system	1	--	Inherited
Xenopus ANatomical entity (XAN)	whole organism	1	--	Inherited
Xenopus ANatomical entity (XAN)	embryo	0	Least Informative	Direct
Xenopus ANatomical entity (XAN)	head	0	Least Informative	Direct
Xenopus ANatomical entity (XAN)	urogenital system	0.03383	Least Informative	Inherited
Xenopus ANatomical entity (XAN)	germ cell	0.00002442	Moderately Informative	Direct
Xenopus ANatomical entity (XAN)	anatomical entity in vitro	0.00007074	Informative	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

AP

Arabidopsis Plant Ontology (AP)

	AP term	FDR (all)	SDAP (four levels)	Annotation (direct or inherited)
Plant ANatomical entity (PAN)	collective plant structure	0	--	Direct
Plant ANatomical entity (PAN)	plant structure	1	--	Inherited

	AP term	FDR (all)	SDAP (four levels)	Annotation (direct or inherited)
Plant structure DEvelopment stage (PDE)	whole plant development stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	sporophyte vegetative stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	flowering stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	plant embryo stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	collective plant organ structure development stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	reproductive shoot system development stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	leaf production stage	0.02263	--	Inherited
Plant structure DEvelopment stage (PDE)	1 main shoot growth stage	0.2583	--	Inherited
Plant structure DEvelopment stage (PDE)	flower development stage	1	--	Inherited
Plant structure DEvelopment stage (PDE)	life of whole plant stage	1	--	Inherited
Plant structure DEvelopment stage (PDE)	shoot system development stage	1	--	Inherited
Plant structure DEvelopment stage (PDE)	sporophyte development stage	1	--	Inherited
Plant structure DEvelopment stage (PDE)	C globular stage	0	Least Informative	Direct
Plant structure DEvelopment stage (PDE)	LP.12 twelve leaves visible stage	0.000667	Least Informative	Direct
Plant structure DEvelopment stage (PDE)	LP.08 eight leaves visible stage	0.0006884	Least Informative	Direct
Plant structure DEvelopment stage (PDE)	LP.02 two leaves visible stage	0.0008611	Least Informative	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

KW

UniProtKB KeyWords (KW)

	KW term	FDR (all)	SDKW (four levels)	Annotation (direct or inherited)
Molecular function	Ribonucleoprotein	1.415e-16	Highly Informative	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

CC

CTD Chemicals (CC)

	CC term	FDR (all)	SDCC (four levels)	Annotation (direct or inherited)
CTD Chemicals (CC)	Benzene Derivatives	0	--	Direct
CTD Chemicals (CC)	Heterocyclic Compounds	0	--	Direct
CTD Chemicals (CC)	Heterocyclic Compounds, 1-Ring	0	--	Direct
CTD Chemicals (CC)	Hydrocarbons	0	--	Direct
CTD Chemicals (CC)	Hydrocarbons, Aromatic	0	--	Direct
CTD Chemicals (CC)	Hydrocarbons, Cyclic	0	--	Direct
CTD Chemicals (CC)	Inorganic Chemicals	0	--	Direct
CTD Chemicals (CC)	Organic Chemicals	0	--	Direct
CTD Chemicals (CC)	Oxocins	0.000000000061	--	Direct
CTD Chemicals (CC)	Adamantane	0.00001246	--	Direct
CTD Chemicals (CC)	Cinnamates	0.001816	--	Inherited
CTD Chemicals (CC)	Ethers	0.007928	--	Inherited
CTD Chemicals (CC)	Methyl Ethers	0.03171	--	Inherited
CTD Chemicals (CC)	Retinoids	0.1012	--	Inherited
CTD Chemicals (CC)	Cyclohexenes	0.1108	--	Inherited
CTD Chemicals (CC)	Polyenes	0.127	--	Inherited
CTD Chemicals (CC)	Polycyclic Compounds	0.1301	--	Inherited
CTD Chemicals (CC)	Cyclohexanes	0.1731	--	Inherited
CTD Chemicals (CC)	Pigments, Biological	0.1955	--	Inherited
CTD Chemicals (CC)	Alkenes	0.2637	--	Inherited
CTD Chemicals (CC)	Peptides	0.3836	--	Inherited
CTD Chemicals (CC)	Hydrocarbons, Alicyclic	0.492	--	Inherited
CTD Chemicals (CC)	Carboxylic Acids	0.5422	--	Inherited
CTD Chemicals (CC)	Heterocyclic Compounds, 2-Ring	0.5819	--	Inherited
CTD Chemicals (CC)	Cycloparaffins	0.7456	--	Inherited
CTD Chemicals (CC)	Heterocyclic Compounds, Fused-Ring	0.9289	--	Inherited
CTD Chemicals (CC)	Macrocyclic Compounds	0.1126	Least Informative	Inherited
CTD Chemicals (CC)	Phenols	0.1286	Least Informative	Inherited
CTD Chemicals (CC)	Hydrocarbons, Acyclic	0.4124	Least Informative	Inherited
CTD Chemicals (CC)	Acids, Carbocyclic	0.415	Least Informative	Inherited
CTD Chemicals (CC)	Amino Acids, Peptides, and Proteins	0.4647	Least Informative	Inherited
CTD Chemicals (CC)	Biological Factors	0.4678	Least Informative	Inherited
CTD Chemicals (CC)	Terpenes	0.5278	Least Informative	Inherited
CTD Chemicals (CC)	Indoles	0.5446	Least Informative	Inherited
CTD Chemicals (CC)	Purines	0.004229	Moderately Informative	Inherited
CTD Chemicals (CC)	Oligopeptides	0.01947	Moderately Informative	Inherited
CTD Chemicals (CC)	Carotenoids	0.1095	Moderately Informative	Inherited
CTD Chemicals (CC)	Phenyl Ethers	0.6266	Moderately Informative	Inherited
CTD Chemicals (CC)	Ethers, Cyclic	0.000002911	Informative	Direct
CTD Chemicals (CC)	Bridged-Ring Compounds	0.0001608	Informative	Direct
CTD Chemicals (CC)	Anisoles	0.00109	Informative	Inherited
CTD Chemicals (CC)	Glutathione	0.00113	Informative	Inherited
CTD Chemicals (CC)	Hydroquinones	0.06269	Informative	Inherited
CTD Chemicals (CC)	Azepines	0.1673	Informative	Inherited
CTD Chemicals (CC)	yessotoxin	0.000000000001531	Highly Informative	Direct
CTD Chemicals (CC)	PP242	0.00000000003812	Highly Informative	Direct
CTD Chemicals (CC)	3-(4'-hydroxy-3'-adamantylbiphenyl-4-yl)acrylic acid	0.0000007347	Highly Informative	Direct
CTD Chemicals (CC)	CD 437	0.00002028	Highly Informative	Direct
CTD Chemicals (CC)	2,3,5-(triglutathion-S-yl)hydroquinone	0.00007075	Highly Informative	Direct
CTD Chemicals (CC)	K 7174	0.0004615	Highly Informative	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

Distribution on sTOL

Plot distribution on species Tree Of Life (sTOL) for this domain, i.e., present or absent across genomes/tips

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Sm-like ribonucleoproteins superfamily