dcGO - A comprehensive domain-centric ontology resource for post-genomic research on functions, phenotypes, diseases and more   
  
  

Acid proteases superfamily

Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All beta proteins [ 48724] (174)
Fold:   Acid proteases [ 50629]
Superfamily:   Acid proteases [ 50630] (3)
Families:   Retroviral protease (retropepsin) [ 50631] (8)
  Pepsin-like [ 50646] (10)
  LPG0085-like [ 159190]

DO

Disease Ontology (DO)

DO term FDR (all) SDDO (four levels) Annotation (direct or inherited)
Disease Ontology (DO)disease of cellular proliferation0--Direct

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MP

Mouse Phenotype (MP)

MP term FDR (all) SDMP (four levels) Annotation (direct or inherited)
Mammalian Phenotype (MP)cachexia0.0002123--Direct
Mammalian Phenotype (MP)decreased body weight0.05592--Inherited
Mammalian Phenotype (MP)abnormal total tissue mass0.07453--Inherited
Mammalian Phenotype (MP)abnormal body weight0.08734--Inherited
Mammalian Phenotype (MP)abnormal body size0.1625--Inherited
Mammalian Phenotype (MP)growth/size/body region phenotype0.06524Least InformativeInherited
Mammalian Phenotype (MP)abnormal body composition0.3595Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal postnatal growth/weight/body size0.7343Moderately InformativeInherited
Mammalian Phenotype (MP)decreased total tissue mass0.05592InformativeInherited
Mammalian Phenotype (MP)decreased body size0.1182InformativeInherited
Mammalian Phenotype (MP)weight loss0.02312Highly InformativeInherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

WP

Worm Phenotype (WP)

WP term FDR (all) SDWP (four levels) Annotation (direct or inherited)
Worm Phenotype (WP)embryonic lethal0--Direct
Worm Phenotype (WP)lethal0--Direct
Worm Phenotype (WP)fertility variant0--Direct
Worm Phenotype (WP)development variant0--Direct
Worm Phenotype (WP)morphology variant0--Direct
Worm Phenotype (WP)organism development variant0--Direct
Worm Phenotype (WP)organism morphology variant0--Direct
Worm Phenotype (WP)organ system physiology variant0--Direct
Worm Phenotype (WP)reproductive system physiology variant0--Direct
Worm Phenotype (WP)maternal sterile0--Direct
Worm Phenotype (WP)hermaphrodite sterile0--Direct
Worm Phenotype (WP)embryonic development variant0--Direct
Worm Phenotype (WP)hermaphrodite fertility variant0--Direct
Worm Phenotype (WP)hermaphrodite fertility reduced0--Direct
Worm Phenotype (WP)fertility reduced0--Direct
Worm Phenotype (WP)protein aggregation variant0.0000000000004116--Direct
Worm Phenotype (WP)protein protein interaction variant0.0000000000005852--Direct
Worm Phenotype (WP)transgene subcellular localization variant0.000000002077--Direct
Worm Phenotype (WP)hypoosmotic shock hypersensitive0.0000001911--Direct
Worm Phenotype (WP)transgene expression variant0.0000004016--Direct
Worm Phenotype (WP)gene expression variant0.000003616--Direct
Worm Phenotype (WP)organism homeostasis metabolism variant0.138--Inherited
Worm Phenotype (WP)organism physiology variant0.1498--Inherited
Worm Phenotype (WP)physiology variant1--Inherited
Worm Phenotype (WP)sterile1--Inherited
Worm Phenotype (WP)organism metabolism processing variant0.00005718Least InformativeDirect
Worm Phenotype (WP)pericellular component development variant0.00000000000001386Moderately InformativeDirect
Worm Phenotype (WP)protein interaction variant0.00000000259Moderately InformativeDirect
Worm Phenotype (WP)pattern of transgene expression variant0.01362Moderately InformativeInherited
Worm Phenotype (WP)basement membrane remodeling variant8.972e-16InformativeDirect
Worm Phenotype (WP)osmotic integrity variant0.0004054Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

YP

Yeast Phenotype (YP)

YP term FDR (all) SDYP (four levels) Annotation (direct or inherited)
Yeast Phenotype (YP)cellular processes0--Direct
Yeast Phenotype (YP)competitive fitness0--Direct
Yeast Phenotype (YP)fitness0--Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

XA

Xenopus Anatomy (XA)

XA term FDR (all) SDXA (four levels) Annotation (direct or inherited)
Xenopus ANatomical entity (XAN)anatomical structure0--Direct
Xenopus ANatomical entity (XAN)multicellular anatomical structure0--Direct
Xenopus ANatomical entity (XAN)whole organism1--Inherited
 
XA term FDR (all) SDXA (four levels) Annotation (direct or inherited)
Xenopus DEvelopment stage (XDE)NF stage0--Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

EC

Enzyme Commission (EC)

EC term FDR (all) SDEC (four levels) Annotation (direct or inherited)
Enzyme Commission (EC)Aspartic endopeptidases0--Direct
Enzyme Commission (EC)Acting on ester bonds0.00003981--Direct
Enzyme Commission (EC)Transferases0.06175--Inherited
Enzyme Commission (EC)Transferring phosphorus-containing groups0Least InformativeDirect
Enzyme Commission (EC)Hydrolases0Least InformativeDirect
Enzyme Commission (EC)Nucleotidyltransferases0Moderately InformativeDirect
Enzyme Commission (EC)Acting on peptide bonds (peptidases)0Moderately InformativeDirect
Enzyme Commission (EC)Acting on acid anhydrides1Moderately InformativeInherited
Enzyme Commission (EC)DNA-directed DNA polymerase0InformativeDirect
Enzyme Commission (EC)Exoribonucleases producing 5'-phosphomonoesters0InformativeDirect
Enzyme Commission (EC)Endoribonucleases producing 5'-phosphomonoesters0InformativeDirect
Enzyme Commission (EC)In phosphorus-containing anhydrides0.0000000004912InformativeDirect
Enzyme Commission (EC)RNA-directed DNA polymerase0Highly InformativeDirect
Enzyme Commission (EC)Exoribonuclease H0Highly InformativeDirect
Enzyme Commission (EC)Retroviral ribonuclease H0Highly InformativeDirect
Enzyme Commission (EC)dUTP diphosphatase0Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

CC

CTD Chemicals (CC)

CC term FDR (all) SDCC (four levels) Annotation (direct or inherited)
CTD Chemicals (CC)Inorganic Chemicals0.9976--Inherited
CTD Chemicals (CC)Aluminum Compounds0.00008461InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

Distribution on sTOL

Plot distribution on species Tree Of Life (sTOL) for this domain, i.e., present or absent across genomes/tips
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