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Pectin lyase-like superfamily

Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All beta proteins [ 48724] (174)
Fold:   Single-stranded right-handed beta-helix [ 51125] (8)
Superfamily:   Pectin lyase-like [ 51126] (11)
Families:   Pectate lyase-like [ 51127] (2)
  Pectin lyase [ 51133]
  Galacturonase [ 51137] (2)
  Chondroitinase B [ 51144]
  iota-carrageenase [ 69333]
  Pectate transeliminase [ 101951]
  Dextranase, catalytic domain [ 101954]
  Pectin methylesterase [ 51147]
  P22 tailspike protein [ 51150]
  Virulence factor P.69 pertactin [ 51153]
  Filamentous hemagglutinin FhaB, secretion domain [ 101957]

WP

Worm Phenotype (WP)

WP term FDR (all) SDWP (four levels) Annotation (direct or inherited)
Worm Phenotype (WP)embryonic lethal0--Direct
Worm Phenotype (WP)lethal0--Direct
Worm Phenotype (WP)fertility variant0--Direct
Worm Phenotype (WP)development variant0--Direct
Worm Phenotype (WP)morphology variant0--Direct
Worm Phenotype (WP)organism development variant0--Direct
Worm Phenotype (WP)organism morphology variant0--Direct
Worm Phenotype (WP)organ system physiology variant0--Direct
Worm Phenotype (WP)reproductive system physiology variant0--Direct
Worm Phenotype (WP)maternal sterile0--Direct
Worm Phenotype (WP)hermaphrodite sterile0--Direct
Worm Phenotype (WP)embryonic development variant0--Direct
Worm Phenotype (WP)hermaphrodite fertility variant0--Direct
Worm Phenotype (WP)hermaphrodite fertility reduced0--Direct
Worm Phenotype (WP)fertility reduced0--Direct
Worm Phenotype (WP)physiology variant1--Inherited
Worm Phenotype (WP)sterile1--Inherited

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FP

Fly Phenotype (FP)

FP term FDR (all) SDFP (four levels) Annotation (direct or inherited)
Fly Phenotype (FP)phenotype0--Direct

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XA

Xenopus Anatomy (XA)

XA term FDR (all) SDXA (four levels) Annotation (direct or inherited)
Xenopus ANatomical entity (XAN)anatomical structure0--Direct
Xenopus ANatomical entity (XAN)anatomical group0--Direct
Xenopus ANatomical entity (XAN)organism subdivision0--Direct
Xenopus ANatomical entity (XAN)compound organ0--Direct
Xenopus ANatomical entity (XAN)anatomical region0--Direct
Xenopus ANatomical entity (XAN)multicellular anatomical structure0--Direct
Xenopus ANatomical entity (XAN)whole organism1--Inherited
 
XA term FDR (all) SDXA (four levels) Annotation (direct or inherited)
Xenopus DEvelopment stage (XDE)NF stage0--Direct

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EC

Enzyme Commission (EC)

EC term FDR (all) SDEC (four levels) Annotation (direct or inherited)
Enzyme Commission (EC)Pectinesterase0--Direct
Enzyme Commission (EC)Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds0--Direct
Enzyme Commission (EC)Endo-polygalacturonase0--Direct
Enzyme Commission (EC)Galacturonan 1,4-alpha-galacturonidase0--Direct
Enzyme Commission (EC)IgA-specific serine endopeptidase0--Direct
Enzyme Commission (EC)Pectate lyase0--Direct
Enzyme Commission (EC)Mannuronan 5-epimerase0--Direct
Enzyme Commission (EC)Rhamnogalacturonan hydrolase0.000000000000006994--Direct
Enzyme Commission (EC)Blood group B branched chain alpha-1,3-galactosidase0.000000000000006994--Direct
Enzyme Commission (EC)Pectin lyase0.000000004476--Direct
Enzyme Commission (EC)Blood group B linear chain alpha-1,3-galactosidase0.00000001157--Direct
Enzyme Commission (EC)Dextranase0.0001143--Direct
Enzyme Commission (EC)Alpha-galactosidase0.0001144--Direct
Enzyme Commission (EC)Acting on ester bonds0.01063--Inherited
Enzyme Commission (EC)Hydrolases0Least InformativeDirect
Enzyme Commission (EC)Lyases0Least InformativeDirect
Enzyme Commission (EC)Glycosylases0Moderately InformativeDirect
Enzyme Commission (EC)Carbon-oxygen lyases0Moderately InformativeDirect
Enzyme Commission (EC)Acting on peptide bonds (peptidases)1Moderately InformativeInherited
Enzyme Commission (EC)Isomerases1Moderately InformativeInherited
Enzyme Commission (EC)Carboxylic ester hydrolases0InformativeDirect
Enzyme Commission (EC)Racemases and epimerases0.001388InformativeInherited
Enzyme Commission (EC)Serine endopeptidases0.2405InformativeInherited
Enzyme Commission (EC)Acting on polysaccharides0Highly InformativeDirect
Enzyme Commission (EC)Acting on carbohydrates and derivatives0.000000006513Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

CD

CTD Diseases (CD)

CD term FDR (all) SDCD (four levels) Annotation (direct or inherited)
CTD Diseases (CD)Digestive System Diseases0Least InformativeDirect
CTD Diseases (CD)Pathological Conditions, Signs and Symptoms0Least InformativeDirect

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CC

CTD Chemicals (CC)

CC term FDR (all) SDCC (four levels) Annotation (direct or inherited)
CTD Chemicals (CC)Heterocyclic Compounds, Fused-Ring0--Direct
CTD Chemicals (CC)Heterocyclic Compounds0--Direct
CTD Chemicals (CC)Heterocyclic Compounds, 2-Ring0--Direct

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Distribution on sTOL

Plot distribution on species Tree Of Life (sTOL) for this domain, i.e., present or absent across genomes/tips
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