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Cdc48 domain 2-like superfamily

Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Alpha and beta proteins (a+b) [ 53931] (376)
Fold:   Cdc48 domain 2-like [ 54584]
Superfamily:   Cdc48 domain 2-like [ 54585]
Families:   Cdc48 domain 2-like [ 54586] (4)

MP

Mouse Phenotype (MP)

MP term FDR (all) SDMP (four levels) Annotation (direct or inherited)
Mammalian Phenotype (MP)abnormal survival0--Direct
Mammalian Phenotype (MP)mortality/aging0Least InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

WP

Worm Phenotype (WP)

WP term FDR (all) SDWP (four levels) Annotation (direct or inherited)
Worm Phenotype (WP)hermaphrodite sterile0--Direct
Worm Phenotype (WP)slow growth0--Direct
Worm Phenotype (WP)embryonic development variant0--Direct
Worm Phenotype (WP)development variant0--Direct
Worm Phenotype (WP)lethal0--Direct
Worm Phenotype (WP)organ system physiology variant0--Direct
Worm Phenotype (WP)hermaphrodite fertility reduced0--Direct
Worm Phenotype (WP)fertility variant0--Direct
Worm Phenotype (WP)organism physiology variant0--Direct
Worm Phenotype (WP)developmental timing variant0--Direct
Worm Phenotype (WP)organism development variant0--Direct
Worm Phenotype (WP)maternal sterile0--Direct
Worm Phenotype (WP)reproductive system physiology variant0--Direct
Worm Phenotype (WP)embryonic lethal0--Direct
Worm Phenotype (WP)hermaphrodite fertility variant0--Direct
Worm Phenotype (WP)organism homeostasis metabolism variant0--Direct
Worm Phenotype (WP)fertility reduced0--Direct
Worm Phenotype (WP)morphology variant0--Direct
Worm Phenotype (WP)growth variant0--Direct
Worm Phenotype (WP)multiple nuclei0.0000001287--Direct
Worm Phenotype (WP)nuclear division variant0.0000003118--Direct
Worm Phenotype (WP)gonad development variant0.000008261--Direct
Worm Phenotype (WP)protein metabolism variant0.00002315--Direct
Worm Phenotype (WP)meiosis variant0.00004085--Direct
Worm Phenotype (WP)protein aggregation variant0.0002287--Direct
Worm Phenotype (WP)protein protein interaction variant0.0002493--Direct
Worm Phenotype (WP)gametogenesis variant0.0004136--Direct
Worm Phenotype (WP)organ system development variant0.0008775--Direct
Worm Phenotype (WP)cell type morphology variant0.001326--Inherited
Worm Phenotype (WP)cell component morphology variant0.001803--Inherited
Worm Phenotype (WP)transgene expression variant0.01289--Inherited
Worm Phenotype (WP)gene expression variant0.02161--Inherited
Worm Phenotype (WP)sterile1--Inherited
Worm Phenotype (WP)physiology variant1--Inherited
Worm Phenotype (WP)retarded heterochronic variations0Least InformativeDirect
Worm Phenotype (WP)larval lethal0Least InformativeDirect
Worm Phenotype (WP)general pace of development variant0Least InformativeDirect
Worm Phenotype (WP)cell morphology variant0.004124Least InformativeInherited
Worm Phenotype (WP)cell development variant0.005325Least InformativeInherited
Worm Phenotype (WP)cell physiology variant0.009835Least InformativeInherited
Worm Phenotype (WP)organism metabolism processing variant0.05826Least InformativeInherited
Worm Phenotype (WP)cell cycle variant0.00006709Moderately InformativeDirect
Worm Phenotype (WP)early embryonic lethal0.00008111Moderately InformativeDirect
Worm Phenotype (WP)metabolic pathway variant0.00008175Moderately InformativeDirect
Worm Phenotype (WP)cell organization biogenesis variant0.00009614Moderately InformativeDirect
Worm Phenotype (WP)reproductive system development variant0.0000992Moderately InformativeDirect
Worm Phenotype (WP)germ cell morphology variant0.0001597Moderately InformativeDirect
Worm Phenotype (WP)cell division variant0.0002615Moderately InformativeDirect
Worm Phenotype (WP)protein interaction variant0.0002656Moderately InformativeDirect
Worm Phenotype (WP)germ cell development variant0.0003855Moderately InformativeDirect
Worm Phenotype (WP)cell homeostasis metabolism variant0.0005189Moderately InformativeDirect
Worm Phenotype (WP)level of transgene expression variant0.001323Moderately InformativeInherited
Worm Phenotype (WP)germ cell cytoplasmic morphology variant0.000001743InformativeDirect
Worm Phenotype (WP)transgene expression reduced0.0001251InformativeDirect
Worm Phenotype (WP)endoplasmic reticulum morphology variant0.0000000001146Highly InformativeDirect
Worm Phenotype (WP)nuclear number variant0.0000002974Highly InformativeDirect
Worm Phenotype (WP)cytoplasmic processing body variant0.0000005579Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

YP

Yeast Phenotype (YP)

YP term FDR (all) SDYP (four levels) Annotation (direct or inherited)
Yeast Phenotype (YP)cellular morphology0--Direct
Yeast Phenotype (YP)cellular processes0--Direct
Yeast Phenotype (YP)stress resistance0--Direct
Yeast Phenotype (YP)competitive fitness0--Direct
Yeast Phenotype (YP)fitness0--Direct
Yeast Phenotype (YP)morphology0Moderately InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

ZA

Zebrafish Anatomy (ZA)

ZA term FDR (all) SDZA (four levels) Annotation (direct or inherited)
Zebrafish Anatomy (ZA)retina0--Direct
Zebrafish Anatomy (ZA)whole organism0--Direct
Zebrafish Anatomy (ZA)visual system0--Direct
Zebrafish Anatomy (ZA)anatomical system0--Direct
Zebrafish Anatomy (ZA)cavitated compound organ0--Direct
Zebrafish Anatomy (ZA)anatomical group0--Direct
Zebrafish Anatomy (ZA)posterior segment eye0--Direct
Zebrafish Anatomy (ZA)anatomical structure1--Inherited
Zebrafish Anatomy (ZA)nervous system0Least InformativeDirect
Zebrafish Anatomy (ZA)compound organ0Least InformativeDirect
Zebrafish Anatomy (ZA)organism subdivision0Least InformativeDirect
Zebrafish Anatomy (ZA)multi-tissue structure0Least InformativeDirect
Zebrafish Anatomy (ZA)cell0Least InformativeDirect
Zebrafish Anatomy (ZA)sensory system0Moderately InformativeDirect
Zebrafish Anatomy (ZA)head0Moderately InformativeDirect
Zebrafish Anatomy (ZA)portion of tissue0Moderately InformativeDirect
Zebrafish Anatomy (ZA)anatomical cluster0Moderately InformativeDirect
Zebrafish Anatomy (ZA)eye0InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

AP

Arabidopsis Plant Ontology (AP)

AP term FDR (all) SDAP (four levels) Annotation (direct or inherited)
Plant ANatomical entity (PAN)gynoecium0--Direct
Plant ANatomical entity (PAN)leaf lamina0--Direct
Plant ANatomical entity (PAN)plant embryo0--Direct
Plant ANatomical entity (PAN)stamen0--Direct
Plant ANatomical entity (PAN)stem internode0--Direct
Plant ANatomical entity (PAN)inflorescence branch0--Direct
Plant ANatomical entity (PAN)epidermal cell0--Direct
Plant ANatomical entity (PAN)cardinal organ part0--Direct
Plant ANatomical entity (PAN)perianth0--Direct
Plant ANatomical entity (PAN)stem0--Direct
Plant ANatomical entity (PAN)shoot epidermis0--Direct
Plant ANatomical entity (PAN)phyllome0--Direct
Plant ANatomical entity (PAN)shoot internode0--Direct
Plant ANatomical entity (PAN)lamina0--Direct
Plant ANatomical entity (PAN)sporophyll0--Direct
Plant ANatomical entity (PAN)shoot epidermal cell0--Direct
Plant ANatomical entity (PAN)shoot system0--Direct
Plant ANatomical entity (PAN)reproductive shoot system0--Direct
Plant ANatomical entity (PAN)androecium0--Direct
Plant ANatomical entity (PAN)epidermis0--Direct
Plant ANatomical entity (PAN)plant cell0--Direct
Plant ANatomical entity (PAN)portion of plant tissue0--Direct
Plant ANatomical entity (PAN)collective plant structure0--Direct
Plant ANatomical entity (PAN)inflorescence axis0--Direct
Plant ANatomical entity (PAN)pedicel0--Direct
Plant ANatomical entity (PAN)calyx0--Direct
Plant ANatomical entity (PAN)leaf lamina base0--Direct
Plant ANatomical entity (PAN)plant organ0--Direct
Plant ANatomical entity (PAN)root0--Direct
Plant ANatomical entity (PAN)multi-tissue plant structure0--Direct
Plant ANatomical entity (PAN)plant axis0--Direct
Plant ANatomical entity (PAN)carpel0--Direct
Plant ANatomical entity (PAN)shoot apex0--Direct
Plant ANatomical entity (PAN)collective leaf structure0--Direct
Plant ANatomical entity (PAN)stomatal complex0--Direct
Plant ANatomical entity (PAN)sepal0--Direct
Plant ANatomical entity (PAN)branch0--Direct
Plant ANatomical entity (PAN)vascular leaf0--Direct
Plant ANatomical entity (PAN)organ lamina1--Inherited
Plant ANatomical entity (PAN)collective plant organ structure1--Inherited
Plant ANatomical entity (PAN)plant structure1--Inherited
Plant ANatomical entity (PAN)phyllome lamina1--Inherited
Plant ANatomical entity (PAN)leaf0Least InformativeDirect
Plant ANatomical entity (PAN)megasporophyll0Least InformativeDirect
Plant ANatomical entity (PAN)collective phyllome structure0Least InformativeDirect
Plant ANatomical entity (PAN)guard cell0Least InformativeDirect
Plant ANatomical entity (PAN)whole plant0Least InformativeDirect
Plant ANatomical entity (PAN)shoot axis0Least InformativeDirect
Plant ANatomical entity (PAN)root system0Least InformativeDirect
Plant ANatomical entity (PAN)cardinal part of multi-tissue plant structure0Least InformativeDirect
Plant ANatomical entity (PAN)flower0Least InformativeDirect
Plant ANatomical entity (PAN)microsporophyll0Least InformativeDirect
Plant ANatomical entity (PAN)inflorescence0Least InformativeDirect
 
AP term FDR (all) SDAP (four levels) Annotation (direct or inherited)
Plant structure DEvelopment stage (PDE)whole plant development stage0--Direct
Plant structure DEvelopment stage (PDE)plant organ development stage0--Direct
Plant structure DEvelopment stage (PDE)plant embryo stage0--Direct
Plant structure DEvelopment stage (PDE)floral organ differentiation stage0--Direct
Plant structure DEvelopment stage (PDE)floral organ formation stage0--Direct
Plant structure DEvelopment stage (PDE)collective plant organ structure development stage0--Direct
Plant structure DEvelopment stage (PDE)flowering stage0--Direct
Plant structure DEvelopment stage (PDE)corolla development stage0--Direct
Plant structure DEvelopment stage (PDE)sporophyte vegetative stage0--Direct
Plant structure DEvelopment stage (PDE)collective phyllome structure development stage0--Direct
Plant structure DEvelopment stage (PDE)reproductive shoot system development stage0--Direct
Plant structure DEvelopment stage (PDE)life of whole plant stage1--Inherited
Plant structure DEvelopment stage (PDE)flower development stage1--Inherited
Plant structure DEvelopment stage (PDE)shoot system development stage1--Inherited
Plant structure DEvelopment stage (PDE)sporophyte development stage1--Inherited
Plant structure DEvelopment stage (PDE)D bilateral stage0Least InformativeDirect
Plant structure DEvelopment stage (PDE)E expanded cotyledon stage0Least InformativeDirect
Plant structure DEvelopment stage (PDE)C globular stage0Least InformativeDirect

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EC

Enzyme Commission (EC)

EC term FDR (all) SDEC (four levels) Annotation (direct or inherited)
Enzyme Commission (EC)Acting on ATP; involved in cellular and subcellular movement0--Direct
Enzyme Commission (EC)Vesicle-fusing ATPase0--Direct
Enzyme Commission (EC)Hydrolases0Least InformativeDirect
Enzyme Commission (EC)Acting on acid anhydrides0Moderately InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

CC

CTD Chemicals (CC)

CC term FDR (all) SDCC (four levels) Annotation (direct or inherited)
CTD Chemicals (CC)Heterocyclic Compounds, Fused-Ring0--Direct
CTD Chemicals (CC)Acetanilides0--Direct
CTD Chemicals (CC)Aniline Compounds0--Direct
CTD Chemicals (CC)Carboxylic Acids0--Direct
CTD Chemicals (CC)Fatty Acids0--Direct
CTD Chemicals (CC)Heterocyclic Compounds0--Direct
CTD Chemicals (CC)Heterocyclic Compounds, 1-Ring0--Direct
CTD Chemicals (CC)Heterocyclic Compounds, 2-Ring0--Direct
CTD Chemicals (CC)Hydrocarbons0--Direct
CTD Chemicals (CC)Inorganic Chemicals0--Direct
CTD Chemicals (CC)Lipids0--Direct
CTD Chemicals (CC)Organic Chemicals0--Direct
CTD Chemicals (CC)Pentanoic Acids0--Direct
CTD Chemicals (CC)Pyrans0--Direct
CTD Chemicals (CC)Sulfates0--Direct
CTD Chemicals (CC)Sulfuric Acids0--Direct
CTD Chemicals (CC)Valerates0--Direct
CTD Chemicals (CC)Valproic Acid0--Direct
CTD Chemicals (CC)Metals, Heavy0--Direct
CTD Chemicals (CC)Acids, Noncarboxylic1--Inherited
CTD Chemicals (CC)Anions1--Inherited
CTD Chemicals (CC)Ions1--Inherited
CTD Chemicals (CC)Acids0Least InformativeDirect
CTD Chemicals (CC)Acids, Acyclic0Least InformativeDirect
CTD Chemicals (CC)Amides0Least InformativeDirect
CTD Chemicals (CC)Amines0Least InformativeDirect
CTD Chemicals (CC)Benzopyrans0Least InformativeDirect
CTD Chemicals (CC)Electrolytes0Least InformativeDirect
CTD Chemicals (CC)Elements0Least InformativeDirect
CTD Chemicals (CC)Fatty Acids, Volatile0Least InformativeDirect
CTD Chemicals (CC)Metals0Least InformativeDirect
CTD Chemicals (CC)Sulfur Compounds0Least InformativeDirect
CTD Chemicals (CC)Anilides0Moderately InformativeDirect
CTD Chemicals (CC)Hydroxy Acids0Moderately InformativeDirect
CTD Chemicals (CC)Sulfur Acids0Moderately InformativeDirect
CTD Chemicals (CC)Copper Sulfate0InformativeDirect

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Distribution on sTOL

Plot distribution on species Tree Of Life (sTOL) for this domain, i.e., present or absent across genomes/tips
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