dcGO - A comprehensive domain-centric ontology resource for post-genomic research on functions, phenotypes, diseases and more   
  
  

L30e-like superfamily

Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Alpha and beta proteins (a+b) [ 53931] (376)
Fold:   Bacillus chorismate mutase-like [ 55297] (9)
Superfamily:   L30e-like [ 55315] (3)
Families:   L30e/L7ae ribosomal proteins [ 55316] (4)
  RNA 2'-O ribose methyltransferase substrate binding domain [ 75480] (2)
  ERF1/Dom34 C-terminal domain-like [ 55323] (3)

MP

Mouse Phenotype (MP)

MP term FDR (all) SDMP (four levels) Annotation (direct or inherited)
Mammalian Phenotype (MP)increased anti-histone antibody level0.00000004029--Direct
Mammalian Phenotype (MP)increased anti-double stranded DNA antibody level0.00003239--Direct
Mammalian Phenotype (MP)increased IgG1 level0.00004865--Direct
Mammalian Phenotype (MP)glomerulonephritis0.00007461--Direct
Mammalian Phenotype (MP)increased IgM level0.0001244--Direct
Mammalian Phenotype (MP)increased autoantibody level0.0002026--Direct
Mammalian Phenotype (MP)increased hematopoietic cell number0.0002249--Direct
Mammalian Phenotype (MP)cortical renal glomerulopathies0.0003686--Direct
Mammalian Phenotype (MP)kidney inflammation0.0004057--Direct
Mammalian Phenotype (MP)abnormal IgM level0.0008076--Direct
Mammalian Phenotype (MP)abnormal leukocyte cell number0.001251--Inherited
Mammalian Phenotype (MP)increased immunoglobulin level0.001728--Inherited
Mammalian Phenotype (MP)abnormal renal glomerulus morphology0.001968--Inherited
Mammalian Phenotype (MP)abnormal leukocyte morphology0.002305--Inherited
Mammalian Phenotype (MP)abnormal immune system cell morphology0.002416--Inherited
Mammalian Phenotype (MP)abnormal kidney cortex morphology0.003128--Inherited
Mammalian Phenotype (MP)abnormal self tolerance0.00408--Inherited
Mammalian Phenotype (MP)abnormal immune tolerance0.004355--Inherited
Mammalian Phenotype (MP)abnormal IgG level0.004566--Inherited
Mammalian Phenotype (MP)abnormal nephron morphology0.006112--Inherited
Mammalian Phenotype (MP)abnormal immune system morphology0.006565--Inherited
Mammalian Phenotype (MP)abnormal immunoglobulin level0.008607--Inherited
Mammalian Phenotype (MP)abnormal hematopoietic cell morphology0.008835--Inherited
Mammalian Phenotype (MP)abnormal hematopoietic system morphology/development0.01527--Inherited
Mammalian Phenotype (MP)abnormal B cell physiology0.01536--Inherited
Mammalian Phenotype (MP)abnormal kidney morphology0.027--Inherited
Mammalian Phenotype (MP)abnormal lymphocyte physiology0.05239--Inherited
Mammalian Phenotype (MP)increased inflammatory response0.05404--Inherited
Mammalian Phenotype (MP)renal/urinary system phenotype0.06225--Inherited
Mammalian Phenotype (MP)abnormal immune cell physiology0.11--Inherited
Mammalian Phenotype (MP)abnormal cell-mediated immunity0.1117--Inherited
Mammalian Phenotype (MP)abnormal adaptive immunity0.1156--Inherited
Mammalian Phenotype (MP)abnormal blood cell physiology0.1258--Inherited
Mammalian Phenotype (MP)abnormal hematopoietic system physiology0.5619--Inherited
Mammalian Phenotype (MP)abnormal immune system physiology0.8691--Inherited
Mammalian Phenotype (MP)hematopoietic system phenotype0.02813Least InformativeInherited
Mammalian Phenotype (MP)immune system phenotype0.0303Least InformativeInherited
Mammalian Phenotype (MP)abnormal hematopoietic cell number0.002529Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal renal/urinary system physiology0.01663Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal renal/urinary system morphology0.03338Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal professional antigen presenting cell physiology0.04409Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal immune serum protein physiology0.05743Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal inflammatory response0.07893Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal leukocyte physiology0.1055Moderately InformativeInherited
Mammalian Phenotype (MP)increased leukocyte cell number0.00009811InformativeDirect
Mammalian Phenotype (MP)abnormal renal corpuscle morphology0.002511InformativeInherited
Mammalian Phenotype (MP)autoimmune response0.004009InformativeInherited
Mammalian Phenotype (MP)abnormal kidney physiology0.004009InformativeInherited
Mammalian Phenotype (MP)abnormal humoral immune response0.01085InformativeInherited
Mammalian Phenotype (MP)increased anti-nuclear antigen antibody level0.00009908Highly InformativeDirect
Mammalian Phenotype (MP)renal/urinary system inflammation0.0004796Highly InformativeDirect
Mammalian Phenotype (MP)increased IgG level0.0007057Highly InformativeDirect
Mammalian Phenotype (MP)abnormal IgG1 level0.0008302Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

WP

Worm Phenotype (WP)

WP term FDR (all) SDWP (four levels) Annotation (direct or inherited)
Worm Phenotype (WP)growth variant0--Direct
Worm Phenotype (WP)postembryonic development variant0--Direct
Worm Phenotype (WP)embryonic lethal0--Direct
Worm Phenotype (WP)lethal0--Direct
Worm Phenotype (WP)fertility variant0--Direct
Worm Phenotype (WP)development variant0--Direct
Worm Phenotype (WP)morphology variant0--Direct
Worm Phenotype (WP)organism development variant0--Direct
Worm Phenotype (WP)organ system physiology variant0--Direct
Worm Phenotype (WP)organism physiology variant0--Direct
Worm Phenotype (WP)organism homeostasis metabolism variant0--Direct
Worm Phenotype (WP)reproductive system physiology variant0--Direct
Worm Phenotype (WP)maternal sterile0--Direct
Worm Phenotype (WP)hermaphrodite sterile0--Direct
Worm Phenotype (WP)embryonic development variant0--Direct
Worm Phenotype (WP)hermaphrodite fertility variant0--Direct
Worm Phenotype (WP)hermaphrodite fertility reduced0--Direct
Worm Phenotype (WP)fertility reduced0--Direct
Worm Phenotype (WP)rachis narrow0.000001963--Direct
Worm Phenotype (WP)mRNA surveillance defective0.000003045--Direct
Worm Phenotype (WP)nuclei small0.000008588--Direct
Worm Phenotype (WP)meiotic progression prophase variant0.0000111--Direct
Worm Phenotype (WP)meiotic progression during oogenesis variant0.00002306--Direct
Worm Phenotype (WP)germ cell compartment morphology variant0.00003455--Direct
Worm Phenotype (WP)oogenesis variant0.00008159--Direct
Worm Phenotype (WP)meiosis variant0.0002352--Direct
Worm Phenotype (WP)gonad morphology variant0.0002502--Direct
Worm Phenotype (WP)gene expression variant0.001648--Inherited
Worm Phenotype (WP)RNA metabolism variant0.001722--Inherited
Worm Phenotype (WP)response to bacteria variant0.007002--Inherited
Worm Phenotype (WP)cell type morphology variant0.01238--Inherited
Worm Phenotype (WP)cell component morphology variant0.01719--Inherited
Worm Phenotype (WP)gametogenesis variant0.06776--Inherited
Worm Phenotype (WP)behavior variant0.1112--Inherited
Worm Phenotype (WP)transgene expression variant0.5166--Inherited
Worm Phenotype (WP)physiology variant1--Inherited
Worm Phenotype (WP)sterile1--Inherited
Worm Phenotype (WP)cell physiology variant0.0003441Least InformativeDirect
Worm Phenotype (WP)cell development variant0.01055Least InformativeInherited
Worm Phenotype (WP)organism metabolism processing variant0.01125Least InformativeInherited
Worm Phenotype (WP)organism environmental stimulus response variant0.03513Least InformativeInherited
Worm Phenotype (WP)organ system morphology variant0.03783Least InformativeInherited
Worm Phenotype (WP)cell morphology variant0.04097Least InformativeInherited
Worm Phenotype (WP)organism behavior variant0.1084Least InformativeInherited
Worm Phenotype (WP)germ cell differentiation variant0.000391Moderately InformativeDirect
Worm Phenotype (WP)early embryonic lethal0.0005252Moderately InformativeDirect
Worm Phenotype (WP)pattern of transgene expression variant0.0008126Moderately InformativeDirect
Worm Phenotype (WP)metabolic pathway variant0.0009659Moderately InformativeDirect
Worm Phenotype (WP)germ cell morphology variant0.001158Moderately InformativeInherited
Worm Phenotype (WP)germ cell development variant0.003171Moderately InformativeInherited
Worm Phenotype (WP)reproductive system morphology variant0.004431Moderately InformativeInherited
Worm Phenotype (WP)feeding behavior variant0.006177Moderately InformativeInherited
Worm Phenotype (WP)cell cycle variant0.03758Moderately InformativeInherited
Worm Phenotype (WP)cell homeostasis metabolism variant0.07622Moderately InformativeInherited
Worm Phenotype (WP)cell division variant0.1435Moderately InformativeInherited
Worm Phenotype (WP)pachytene progression during oogenesis variant0.000002293InformativeDirect
Worm Phenotype (WP)diplotene progression during oogenesis variant0.000002447InformativeDirect
Worm Phenotype (WP)germ cell compartment expansion variant0.00001236InformativeDirect
Worm Phenotype (WP)rachis morphology variant0.00001373InformativeDirect
Worm Phenotype (WP)oocyte morphology variant0.00009011InformativeDirect
Worm Phenotype (WP)avoids bacterial lawn0.0004813InformativeDirect
Worm Phenotype (WP)RNA expression variant0.01859InformativeInherited
Worm Phenotype (WP)gonad vesiculated0.0000005255Highly InformativeDirect
Worm Phenotype (WP)pachytene region organization variant0.000001253Highly InformativeDirect
Worm Phenotype (WP)oocyte number decreased0.000002722Highly InformativeDirect
Worm Phenotype (WP)RNA processing variant0.00001039Highly InformativeDirect
Worm Phenotype (WP)nuclear appearance variant0.005016Highly InformativeInherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

YP

Yeast Phenotype (YP)

YP term FDR (all) SDYP (four levels) Annotation (direct or inherited)
Yeast Phenotype (YP)cellular processes0--Direct
Yeast Phenotype (YP)stress resistance0--Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

FP

Fly Phenotype (FP)

FP term FDR (all) SDFP (four levels) Annotation (direct or inherited)
Fly Phenotype (FP)phenotype0--Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

FA

Fly Anatomy (FA)

FA term FDR (all) SDFA (four levels) Annotation (direct or inherited)
Fly Anatomy (FA)organism0--Direct
Fly Anatomy (FA)organ system0--Direct
Fly Anatomy (FA)multicellular structure0--Direct
Fly Anatomy (FA)anatomical structure1--Inherited
Fly Anatomy (FA)material anatomical entity1--Inherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

XA

Xenopus Anatomy (XA)

XA term FDR (all) SDXA (four levels) Annotation (direct or inherited)
Xenopus ANatomical entity (XAN)head region0--Direct
Xenopus ANatomical entity (XAN)anatomical structure0--Direct
Xenopus ANatomical entity (XAN)anatomical group0--Direct
Xenopus ANatomical entity (XAN)organism subdivision0--Direct
Xenopus ANatomical entity (XAN)anatomical region0--Direct
Xenopus ANatomical entity (XAN)multicellular anatomical structure0--Direct
Xenopus ANatomical entity (XAN)whole organism1--Inherited
Xenopus ANatomical entity (XAN)head0Least InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

EC

Enzyme Commission (EC)

EC term FDR (all) SDEC (four levels) Annotation (direct or inherited)
Enzyme Commission (EC)Methyltransferases0--Direct
Enzyme Commission (EC)23S rRNA (guanosine(2251)-2'-O)-methyltransferase0--Direct
Enzyme Commission (EC)Transferases0.00000000003133--Direct
Enzyme Commission (EC)Acting on ester bonds0.07769--Inherited
Enzyme Commission (EC)Hydrolases1Least InformativeInherited
Enzyme Commission (EC)Transferring one-carbon groups0Moderately InformativeDirect
Enzyme Commission (EC)Endoribonucleases producing 5'-phosphomonoesters0.0001591InformativeDirect
Enzyme Commission (EC)Ribonuclease P0.0000001117Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

CC

CTD Chemicals (CC)

CC term FDR (all) SDCC (four levels) Annotation (direct or inherited)
CTD Chemicals (CC)Heterocyclic Compounds, Fused-Ring0--Direct
CTD Chemicals (CC)Heterocyclic Compounds0--Direct
CTD Chemicals (CC)Heterocyclic Compounds, 1-Ring0--Direct
CTD Chemicals (CC)Heterocyclic Compounds, 2-Ring0--Direct
CTD Chemicals (CC)Inorganic Chemicals0--Direct
CTD Chemicals (CC)Organic Chemicals0--Direct
CTD Chemicals (CC)Uracil0.05506--Inherited
CTD Chemicals (CC)Quinolines0.178--Inherited
CTD Chemicals (CC)Hydrocarbons, Chlorinated0.4112--Inherited
CTD Chemicals (CC)Hydrocarbons0.4501--Inherited
CTD Chemicals (CC)Toxins, Biological0.9859--Inherited
CTD Chemicals (CC)Pyrimidines0.6066Least InformativeInherited
CTD Chemicals (CC)Azoles1Least InformativeInherited
CTD Chemicals (CC)Biological Factors1Least InformativeInherited
CTD Chemicals (CC)Hydrocarbons, Halogenated0.007035Moderately InformativeInherited
CTD Chemicals (CC)Bacterial Toxins0.07537Moderately InformativeInherited
CTD Chemicals (CC)Pyrimidinones0.08605Moderately InformativeInherited
CTD Chemicals (CC)Pyrroles0.4497Moderately InformativeInherited
CTD Chemicals (CC)Benzimidazoles0.004439InformativeInherited
CTD Chemicals (CC)Quinolones0.008567InformativeInherited
CTD Chemicals (CC)Piperazines0.02119InformativeInherited
CTD Chemicals (CC)5-(4-methylpiperazin-1-yl)-2-(2'-(3,4-dimethoxyphenyl)-5'-benzimidazolyl)benzimidazole0.0000007907Highly InformativeDirect
CTD Chemicals (CC)7-(benzylamino)-1,3,4,8-tetrahydropyrrolo(4,3,2-de)quinolin-8(1H)-one0.00002517Highly InformativeDirect
CTD Chemicals (CC)chloropicrin0.00005306Highly InformativeDirect
CTD Chemicals (CC)cylindrospermopsin0.0006593Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

Distribution on sTOL

Plot distribution on species Tree Of Life (sTOL) for this domain, i.e., present or absent across genomes/tips
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