dcGO - A comprehensive domain-centric ontology resource for post-genomic research on functions, phenotypes, diseases and more   
  
  

SNARE fusion complex superfamily

Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Coiled coil proteins [ 57942] (7)
Fold:   Parallel coiled-coil [ 57943] (34)
Superfamily:   SNARE fusion complex [ 58038]
Families:   SNARE fusion complex [ 58039] (11)

DO

Disease Ontology (DO)

DO term FDR (all) SDDO (four levels) Annotation (direct or inherited)
Disease Ontology (DO)parathyroid adenoma0.000000003575--Direct
Disease Ontology (DO)disease of cellular proliferation1--Inherited
Disease Ontology (DO)benign neoplasm0.0422Moderately InformativeInherited
Disease Ontology (DO)organ system benign neoplasm0.002863InformativeInherited
Disease Ontology (DO)endocrine organ benign neoplasm0.00009375Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

HP

Human Phenotype (HP)

HP term FDR (all) SDHP (four levels) Annotation (direct or inherited)
Phenotypic Abnormality (PA)Abnormality of the nervous system0--Direct
Phenotypic Abnormality (PA)Abnormality of the skeletal system0--Direct
Phenotypic Abnormality (PA)Abnormal axial skeleton morphology0--Direct
Phenotypic Abnormality (PA)Abnormal muscle physiology0--Direct
Phenotypic Abnormality (PA)EEG with spike-wave complexes0.00000926--Direct
Phenotypic Abnormality (PA)Poor head control0.0001769--Direct
Phenotypic Abnormality (PA)Long face0.0002817--Direct
Phenotypic Abnormality (PA)Prenatal movement abnormality0.0003706--Direct
Phenotypic Abnormality (PA)Reduced tendon reflexes0.0003759--Direct
Phenotypic Abnormality (PA)EEG with generalized epileptiform discharges0.000497--Direct
Phenotypic Abnormality (PA)Hip dislocation0.0005754--Direct
Phenotypic Abnormality (PA)Interictal EEG abnormality0.0006111--Direct
Phenotypic Abnormality (PA)Lower extremity joint dislocation0.000969--Direct
Phenotypic Abnormality (PA)Abnormality of the hip joint0.001203--Inherited
Phenotypic Abnormality (PA)EEG abnormality0.004364--Inherited
Phenotypic Abnormality (PA)Abnormality of the hip bone0.004364--Inherited
Phenotypic Abnormality (PA)Large face0.01963--Inherited
Phenotypic Abnormality (PA)Abnormality of the face0.1564--Inherited
Phenotypic Abnormality (PA)Abnormality of head or neck0.2145--Inherited
Phenotypic Abnormality (PA)Muscle weakness0.2296--Inherited
Phenotypic Abnormality (PA)Abnormal appendicular skeleton morphology0.4234--Inherited
Phenotypic Abnormality (PA)Abnormality of central nervous system electrophysiology0.6334--Inherited
Phenotypic Abnormality (PA)Interictal epileptiform activity1--Inherited
Phenotypic Abnormality (PA)Abnormality of the musculature0Least InformativeDirect
Phenotypic Abnormality (PA)Abnormality of skeletal morphology0Least InformativeDirect
Phenotypic Abnormality (PA)Abnormality of nervous system physiology0Least InformativeDirect
Phenotypic Abnormality (PA)Abnormality of the head0.2095Least InformativeInherited
Phenotypic Abnormality (PA)Abnormality of limbs0.229Least InformativeInherited
Phenotypic Abnormality (PA)Abnormality of higher mental function0Moderately InformativeDirect
Phenotypic Abnormality (PA)Abnormality of movement0Moderately InformativeDirect
Phenotypic Abnormality (PA)Abnormality of the lower limb0.1109Moderately InformativeInherited
Phenotypic Abnormality (PA)Abnormal joint morphology0.1812Moderately InformativeInherited
Phenotypic Abnormality (PA)Seizures0InformativeDirect
Phenotypic Abnormality (PA)Abnormality of the synovia0.001333InformativeInherited
Phenotypic Abnormality (PA)Abnormal nervous system electrophysiology0.002077InformativeInherited
Phenotypic Abnormality (PA)Joint dislocation0.00249InformativeInherited
Phenotypic Abnormality (PA)Abnormal facial shape0.004291InformativeInherited
Phenotypic Abnormality (PA)Abnormality of pelvic girdle bone morphology0.007172InformativeInherited
Phenotypic Abnormality (PA)Abnormality of lower limb joint0.009124InformativeInherited
Phenotypic Abnormality (PA)Abnormality of prenatal development or birth0.02377InformativeInherited
Phenotypic Abnormality (PA)Neurological speech impairment0.07819InformativeInherited
Phenotypic Abnormality (PA)Abnormal reflex0.1842InformativeInherited
Phenotypic Abnormality (PA)Areflexia0.00001345Highly InformativeDirect
Phenotypic Abnormality (PA)Decreased fetal movement0.0002887Highly InformativeDirect
Phenotypic Abnormality (PA)Dysarthria0.0004026Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

MP

Mouse Phenotype (MP)

MP term FDR (all) SDMP (four levels) Annotation (direct or inherited)
Mammalian Phenotype (MP)abnormal neurotransmitter secretion0.00007651--Direct
Mammalian Phenotype (MP)abnormal axon extension0.0004687--Direct
Mammalian Phenotype (MP)abnormal paired-pulse facilitation0.01147--Inherited
Mammalian Phenotype (MP)abnormal neuron differentiation0.03896--Inherited
Mammalian Phenotype (MP)abnormal synaptic transmission0.04399--Inherited
Mammalian Phenotype (MP)abnormal cell physiology0.7653--Inherited
Mammalian Phenotype (MP)abnormal nervous system morphology0.8869--Inherited
Mammalian Phenotype (MP)nervous system phenotype0.1911Least InformativeInherited
Mammalian Phenotype (MP)cellular phenotype0.8686Least InformativeInherited
Mammalian Phenotype (MP)abnormal nervous system physiology0.04937Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal neuron morphology0.3801Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal nervous system development0.4498Moderately InformativeInherited
Mammalian Phenotype (MP)abnormal cell differentiation0.06472InformativeInherited
Mammalian Phenotype (MP)enhanced paired-pulse facilitation0.00006378Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

WP

Worm Phenotype (WP)

WP term FDR (all) SDWP (four levels) Annotation (direct or inherited)
Worm Phenotype (WP)lethal0--Direct
Worm Phenotype (WP)fertility variant0--Direct
Worm Phenotype (WP)development variant0--Direct
Worm Phenotype (WP)morphology variant0--Direct
Worm Phenotype (WP)organism development variant0--Direct
Worm Phenotype (WP)organ system physiology variant0--Direct
Worm Phenotype (WP)reproductive system physiology variant0--Direct
Worm Phenotype (WP)fertility reduced0--Direct
Worm Phenotype (WP)lysosome morphology variant0.00000000000348--Direct
Worm Phenotype (WP)cell component morphology variant0.2446--Inherited
Worm Phenotype (WP)physiology variant1--Inherited
Worm Phenotype (WP)cell morphology variant0.0004585Least InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

FP

Fly Phenotype (FP)

FP term FDR (all) SDFP (four levels) Annotation (direct or inherited)
Fly Phenotype (FP)uncoordinated0.000418--Direct
Fly Phenotype (FP)increased mortality during development0.0009431--Direct
Fly Phenotype (FP)phenotype0.1555--Inherited
Fly Phenotype (FP)increased mortality0.003864Least InformativeInherited
Fly Phenotype (FP)behavior defective0.4601Moderately InformativeInherited
Fly Phenotype (FP)neurophysiology defective0.0006937InformativeDirect
Fly Phenotype (FP)locomotor behavior defective0.1743Highly InformativeInherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

FA

Fly Anatomy (FA)

FA term FDR (all) SDFA (four levels) Annotation (direct or inherited)
Fly Anatomy (FA)organism0--Direct
Fly Anatomy (FA)multicellular structure0--Direct
Fly Anatomy (FA)anatomical structure1--Inherited
Fly Anatomy (FA)material anatomical entity1--Inherited
Fly Anatomy (FA)larva0Least InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

ZA

Zebrafish Anatomy (ZA)

ZA term FDR (all) SDZA (four levels) Annotation (direct or inherited)
Zebrafish Anatomy (ZA)brain0--Direct
Zebrafish Anatomy (ZA)hindbrain0--Direct
Zebrafish Anatomy (ZA)whole organism0--Direct
Zebrafish Anatomy (ZA)anatomical system0--Direct
Zebrafish Anatomy (ZA)cavitated compound organ0--Direct
Zebrafish Anatomy (ZA)anatomical group0--Direct
Zebrafish Anatomy (ZA)anatomical structure1--Inherited
Zebrafish Anatomy (ZA)nervous system0Least InformativeDirect
Zebrafish Anatomy (ZA)compound organ0Least InformativeDirect
Zebrafish Anatomy (ZA)multi-tissue structure0Least InformativeDirect
Zebrafish Anatomy (ZA)central nervous system0Moderately InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

XA

Xenopus Anatomy (XA)

XA term FDR (all) SDXA (four levels) Annotation (direct or inherited)
Xenopus ANatomical entity (XAN)anatomical structure0--Direct
Xenopus ANatomical entity (XAN)anatomical group0--Direct
Xenopus ANatomical entity (XAN)multicellular anatomical structure0--Direct
Xenopus ANatomical entity (XAN)whole organism1--Inherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

AP

Arabidopsis Plant Ontology (AP)

AP term FDR (all) SDAP (four levels) Annotation (direct or inherited)
Plant ANatomical entity (PAN)plant cell0.0646--Inherited
Plant ANatomical entity (PAN)plant structure1--Inherited
Plant ANatomical entity (PAN)pollen tube cell0.0000001036InformativeDirect
 
AP term FDR (all) SDAP (four levels) Annotation (direct or inherited)
Plant structure DEvelopment stage (PDE)floral organ differentiation stage0--Direct
Plant structure DEvelopment stage (PDE)collective plant organ structure development stage0--Direct
Plant structure DEvelopment stage (PDE)plant organ development stage0--Direct
Plant structure DEvelopment stage (PDE)reproductive shoot system development stage0--Direct
Plant structure DEvelopment stage (PDE)collective phyllome structure development stage0--Direct
Plant structure DEvelopment stage (PDE)floral organ formation stage0--Direct
Plant structure DEvelopment stage (PDE)androecium development stage0.000005469--Direct
Plant structure DEvelopment stage (PDE)flower development stage1--Inherited
Plant structure DEvelopment stage (PDE)shoot system development stage1--Inherited
Plant structure DEvelopment stage (PDE)pollen development stage0.00000189Moderately InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

CD

CTD Diseases (CD)

CD term FDR (all) SDCD (four levels) Annotation (direct or inherited)
CTD Diseases (CD)Psychotic Disorders0.000008134--Direct
CTD Diseases (CD)Bipolar and Related Disorders0.0001824--Direct
CTD Diseases (CD)Mental Disorders0.1231Moderately InformativeInherited
CTD Diseases (CD)Schizophrenia Spectrum and Other Psychotic Disorders0.003315Highly InformativeInherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

CC

CTD Chemicals (CC)

CC term FDR (all) SDCC (four levels) Annotation (direct or inherited)
CTD Chemicals (CC)Heterocyclic Compounds0--Direct
CTD Chemicals (CC)Heterocyclic Compounds, 1-Ring0--Direct
CTD Chemicals (CC)Hydrocarbons0--Direct
CTD Chemicals (CC)Inorganic Chemicals0--Direct
CTD Chemicals (CC)Organic Chemicals0--Direct
CTD Chemicals (CC)Heroin0.000005503--Direct
CTD Chemicals (CC)Lactic Acid0.0003004--Direct
CTD Chemicals (CC)Morphinans0.0004946--Direct
CTD Chemicals (CC)Opiate Alkaloids0.00123--Inherited
CTD Chemicals (CC)Hydrocarbons, Aromatic0.08104--Inherited
CTD Chemicals (CC)Polycyclic Compounds0.08435--Inherited
CTD Chemicals (CC)Carboxylic Acids0.1721--Inherited
CTD Chemicals (CC)Heterocyclic Compounds, Bridged-Ring0.3419--Inherited
CTD Chemicals (CC)Heterocyclic Compounds, Fused-Ring0.55--Inherited
CTD Chemicals (CC)Hydrocarbons, Cyclic0.8362--Inherited
CTD Chemicals (CC)Polycyclic Aromatic Hydrocarbons0.7159Least InformativeInherited
CTD Chemicals (CC)Alkaloids0.3702Moderately InformativeInherited
CTD Chemicals (CC)Hydroxy Acids0.3909Moderately InformativeInherited
CTD Chemicals (CC)Heterocyclic Compounds, 4 or More Rings0.6926Moderately InformativeInherited
CTD Chemicals (CC)Phenanthrenes0.03986InformativeInherited
CTD Chemicals (CC)Morphine Derivatives0.0001954Highly InformativeDirect
CTD Chemicals (CC)Lactates0.000318Highly InformativeDirect

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Distribution on sTOL

Plot distribution on species Tree Of Life (sTOL) for this domain, i.e., present or absent across genomes/tips
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