dcGO - A comprehensive domain-centric ontology resource for post-genomic research on functions, phenotypes, diseases and more   
  
  

Calcium ATPase, transmembrane domain M family

Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Membrane and cell surface proteins and peptides [ 56835] (58)
Fold:   Calcium ATPase, transmembrane domain M [ 81666]
Superfamily:   Calcium ATPase, transmembrane domain M [ 81665]
Family:   Calcium ATPase, transmembrane domain M [ 81664]

MP

Mouse Phenotype (MP)

MP term FDR (all) SDMP (four levels) Annotation (direct or inherited)
Mammalian Phenotype (MP)muscle phenotype0.0004421--Direct
Mammalian Phenotype (MP)abnormal muscle contractility0.05581--Inherited
Mammalian Phenotype (MP)abnormal muscle physiology0.00002706Moderately InformativeDirect
Mammalian Phenotype (MP)impaired muscle contractility0.00000478InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

WP

Worm Phenotype (WP)

WP term FDR (all) SDWP (four levels) Annotation (direct or inherited)
Worm Phenotype (WP)embryonic lethal0--Direct
Worm Phenotype (WP)lethal0--Direct
Worm Phenotype (WP)fertility variant0--Direct
Worm Phenotype (WP)development variant0--Direct
Worm Phenotype (WP)morphology variant0--Direct
Worm Phenotype (WP)organism development variant0--Direct
Worm Phenotype (WP)organism morphology variant0--Direct
Worm Phenotype (WP)organ system physiology variant0--Direct
Worm Phenotype (WP)organism physiology variant0--Direct
Worm Phenotype (WP)organism homeostasis metabolism variant0--Direct
Worm Phenotype (WP)reproductive system physiology variant0--Direct
Worm Phenotype (WP)maternal sterile0--Direct
Worm Phenotype (WP)hermaphrodite sterile0--Direct
Worm Phenotype (WP)embryonic development variant0--Direct
Worm Phenotype (WP)hermaphrodite fertility variant0--Direct
Worm Phenotype (WP)hermaphrodite fertility reduced0--Direct
Worm Phenotype (WP)fertility reduced0--Direct
Worm Phenotype (WP)drug response variant0.0002899--Direct
Worm Phenotype (WP)nicotine response variant0.004382--Inherited
Worm Phenotype (WP)cholinergic agonist hypersensitive0.01195--Inherited
Worm Phenotype (WP)physiology variant1--Inherited
Worm Phenotype (WP)sterile1--Inherited
Worm Phenotype (WP)organism environmental stimulus response variant0.0005805Least InformativeDirect
Worm Phenotype (WP)chemical response variant0.3515Moderately InformativeInherited
Worm Phenotype (WP)drug hypersensitive0.005433InformativeInherited
Worm Phenotype (WP)chemical hypersensitive0.07113InformativeInherited
Worm Phenotype (WP)nicotine hypersensitive0.0000001296Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

ZA

Zebrafish Anatomy (ZA)

ZA term FDR (all) SDZA (four levels) Annotation (direct or inherited)
Zebrafish Anatomy (ZA)whole organism0--Direct
Zebrafish Anatomy (ZA)anatomical system0--Direct
Zebrafish Anatomy (ZA)anatomical group0--Direct
Zebrafish Anatomy (ZA)atrium0.0009994--Direct
Zebrafish Anatomy (ZA)compound organ0.6242--Inherited
Zebrafish Anatomy (ZA)anatomical structure1--Inherited
Zebrafish Anatomy (ZA)anatomical cluster0.3629Least InformativeInherited
Zebrafish Anatomy (ZA)cavitated compound organ0.4867Least InformativeInherited
Zebrafish Anatomy (ZA)cardiovascular system0.1634Moderately InformativeInherited
Zebrafish Anatomy (ZA)pericardial region0.1077InformativeInherited
Zebrafish Anatomy (ZA)heart0.02168Highly InformativeInherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

XA

Xenopus Anatomy (XA)

XA term FDR (all) SDXA (four levels) Annotation (direct or inherited)
Xenopus ANatomical entity (XAN)anatomical structure0--Direct
Xenopus ANatomical entity (XAN)anatomical group0--Direct
Xenopus ANatomical entity (XAN)organism subdivision0--Direct
Xenopus ANatomical entity (XAN)compound organ0--Direct
Xenopus ANatomical entity (XAN)anatomical region0--Direct
Xenopus ANatomical entity (XAN)multicellular anatomical structure0--Direct
Xenopus ANatomical entity (XAN)whole organism1--Inherited
Xenopus ANatomical entity (XAN)cavitated compound organ0Least InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

AP

Arabidopsis Plant Ontology (AP)

AP term FDR (all) SDAP (four levels) Annotation (direct or inherited)
Plant ANatomical entity (PAN)plant cell0--Direct
Plant ANatomical entity (PAN)shoot system0--Direct
Plant ANatomical entity (PAN)collective plant structure0--Direct
Plant ANatomical entity (PAN)parenchyma cell0.000000000117--Direct
Plant ANatomical entity (PAN)mesophyll cell0.0000000006395--Direct
Plant ANatomical entity (PAN)chlorenchyma cell0.005071--Inherited
Plant ANatomical entity (PAN)parenchyma0.01654--Inherited
Plant ANatomical entity (PAN)portion of plant tissue0.5515--Inherited
Plant ANatomical entity (PAN)mesophyll1--Inherited
Plant ANatomical entity (PAN)plant structure1--Inherited
Plant ANatomical entity (PAN)collective plant organ structure1--Inherited
Plant ANatomical entity (PAN)portion of ground tissue0.000002013InformativeDirect
Plant ANatomical entity (PAN)ground tissue cell0.000000002006Highly InformativeDirect
Plant ANatomical entity (PAN)chlorenchyma0.04029Highly InformativeInherited
 
AP term FDR (all) SDAP (four levels) Annotation (direct or inherited)
Plant structure DEvelopment stage (PDE)floral organ differentiation stage0--Direct
Plant structure DEvelopment stage (PDE)corolla development stage0--Direct
Plant structure DEvelopment stage (PDE)flowering stage0--Direct
Plant structure DEvelopment stage (PDE)collective plant organ structure development stage0--Direct
Plant structure DEvelopment stage (PDE)plant organ development stage0--Direct
Plant structure DEvelopment stage (PDE)reproductive shoot system development stage0--Direct
Plant structure DEvelopment stage (PDE)collective phyllome structure development stage0--Direct
Plant structure DEvelopment stage (PDE)floral organ formation stage0--Direct
Plant structure DEvelopment stage (PDE)flower development stage1--Inherited
Plant structure DEvelopment stage (PDE)shoot system development stage1--Inherited

LINKTO: Domain2BO Download and Domain2BO Algorithm

EC

Enzyme Commission (EC)

EC term FDR (all) SDEC (four levels) Annotation (direct or inherited)
Enzyme Commission (EC)Acting on acid anhydrides; catalyzing transmembrane movement of substances0--Direct
Enzyme Commission (EC)Hydron translocation linked to the hydrolysis of a nucleoside triphosphate0--Direct
Enzyme Commission (EC)P-type H(+)-exporting transporter0--Direct
Enzyme Commission (EC)Linked to the hydrolysis of a nucleoside triphosphate0--Direct
Enzyme Commission (EC)P-type Ca(2+) transporter0.0000000000001711--Direct
Enzyme Commission (EC)Na(+)/K(+)-exchanging ATPase0.0000135--Direct
Enzyme Commission (EC)Catalysing the translocation of hydrons1--Inherited
Enzyme Commission (EC)Hydrolases1Least InformativeInherited
Enzyme Commission (EC)Acting on acid anhydrides0.6916Moderately InformativeInherited
Enzyme Commission (EC)Translocases0InformativeDirect
Enzyme Commission (EC)Catalysing the translocation of inorganic cations0Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

CC

CTD Chemicals (CC)

CC term FDR (all) SDCC (four levels) Annotation (direct or inherited)
CTD Chemicals (CC)Heterocyclic Compounds, Fused-Ring0--Direct
CTD Chemicals (CC)Carboxylic Acids0--Direct
CTD Chemicals (CC)Heterocyclic Compounds0--Direct
CTD Chemicals (CC)Heterocyclic Compounds, 1-Ring0--Direct
CTD Chemicals (CC)Heterocyclic Compounds, 2-Ring0--Direct
CTD Chemicals (CC)Hydrocarbons0--Direct
CTD Chemicals (CC)Hydrocarbons, Aromatic0--Direct
CTD Chemicals (CC)Hydrocarbons, Cyclic0--Direct
CTD Chemicals (CC)Inorganic Chemicals0--Direct
CTD Chemicals (CC)Organic Chemicals0--Direct
CTD Chemicals (CC)Strophanthins0.000003417--Direct
CTD Chemicals (CC)Cardenolides0.000008896--Direct
CTD Chemicals (CC)Cardanolides0.0000493--Direct
CTD Chemicals (CC)Metals, Heavy0.208--Inherited
CTD Chemicals (CC)Polycyclic Compounds0.2418--Inherited
CTD Chemicals (CC)Glycosides0.6872--Inherited
CTD Chemicals (CC)Transition Elements0.7219--Inherited
CTD Chemicals (CC)Steroids1--Inherited
CTD Chemicals (CC)Biological Factors0Least InformativeDirect
CTD Chemicals (CC)Metals0.3411Least InformativeInherited
CTD Chemicals (CC)Fused-Ring Compounds0.3565Least InformativeInherited
CTD Chemicals (CC)Complex Mixtures0.3585Least InformativeInherited
CTD Chemicals (CC)Elements0.6576Least InformativeInherited
CTD Chemicals (CC)Carbohydrates0.7604Least InformativeInherited
CTD Chemicals (CC)Particulate Matter0.02265Moderately InformativeInherited
CTD Chemicals (CC)Cardiac Glycosides0.00003103InformativeDirect
CTD Chemicals (CC)Coal Ash0.0000005721Highly InformativeDirect
CTD Chemicals (CC)Ouabain0.000002706Highly InformativeDirect
CTD Chemicals (CC)Metals, Alkali0.00004213Highly InformativeDirect
CTD Chemicals (CC)Vanadium0.0001407Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

Distribution on sTOL

Plot distribution on species Tree Of Life (sTOL) for this domain, i.e., present or absent across genomes/tips
Plot tree as:   Download Newick format tree:   Browsing in TREE OF LIFE:
(show help)