R3H domain superfamily

WP

Worm Phenotype (WP)

	WP term	FDR (all)	SDWP (four levels)	Annotation (direct or inherited)
Worm Phenotype (WP)	growth variant	0	--	Direct
Worm Phenotype (WP)	slow growth	0	--	Direct
Worm Phenotype (WP)	developmental timing variant	0	--	Direct
Worm Phenotype (WP)	postembryonic development variant	0	--	Direct
Worm Phenotype (WP)	embryonic lethal	0	--	Direct
Worm Phenotype (WP)	larval arrest	0	--	Direct
Worm Phenotype (WP)	lethal	0	--	Direct
Worm Phenotype (WP)	progeny variant	0	--	Direct
Worm Phenotype (WP)	fertility variant	0	--	Direct
Worm Phenotype (WP)	development variant	0	--	Direct
Worm Phenotype (WP)	morphology variant	0	--	Direct
Worm Phenotype (WP)	organism development variant	0	--	Direct
Worm Phenotype (WP)	organism morphology variant	0	--	Direct
Worm Phenotype (WP)	organ system physiology variant	0	--	Direct
Worm Phenotype (WP)	organism physiology variant	0	--	Direct
Worm Phenotype (WP)	organism homeostasis metabolism variant	0	--	Direct
Worm Phenotype (WP)	reproductive system physiology variant	0	--	Direct
Worm Phenotype (WP)	maternal sterile	0	--	Direct
Worm Phenotype (WP)	hermaphrodite sterile	0	--	Direct
Worm Phenotype (WP)	embryonic development variant	0	--	Direct
Worm Phenotype (WP)	hermaphrodite fertility variant	0	--	Direct
Worm Phenotype (WP)	developmental growth variant	0	--	Direct
Worm Phenotype (WP)	hermaphrodite fertility reduced	0	--	Direct
Worm Phenotype (WP)	fertility reduced	0	--	Direct
Worm Phenotype (WP)	physiology variant	1	--	Inherited
Worm Phenotype (WP)	sterile	1	--	Inherited
Worm Phenotype (WP)	general pace of development variant	0	Least Informative	Direct
Worm Phenotype (WP)	larval lethal	0	Least Informative	Direct
Worm Phenotype (WP)	retarded heterochronic variations	0	Least Informative	Direct
Worm Phenotype (WP)	larval development variant	0	Least Informative	Direct
Worm Phenotype (WP)	larval growth variant	0	Least Informative	Direct
Worm Phenotype (WP)	sterile progeny	0	Moderately Informative	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

YP

Yeast Phenotype (YP)

	YP term	FDR (all)	SDYP (four levels)	Annotation (direct or inherited)
Yeast Phenotype (YP)	cellular processes	0	--	Direct
Yeast Phenotype (YP)	stress resistance	0	--	Direct
Yeast Phenotype (YP)	thermotolerance	0	--	Direct
Yeast Phenotype (YP)	competitive fitness	0	--	Direct
Yeast Phenotype (YP)	fitness	0	--	Direct
Yeast Phenotype (YP)	resistance to chemicals	0	Least Informative	Direct
Yeast Phenotype (YP)	innate thermotolerance	0	Highly Informative	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

FA

Fly Anatomy (FA)

	FA term	FDR (all)	SDFA (four levels)	Annotation (direct or inherited)
Fly Anatomy (FA)	organism	0	--	Direct
Fly Anatomy (FA)	organ system	0	--	Direct
Fly Anatomy (FA)	multicellular structure	0	--	Direct
Fly Anatomy (FA)	anatomical structure	1	--	Inherited
Fly Anatomy (FA)	material anatomical entity	1	--	Inherited
Fly Anatomy (FA)	larva	0	Least Informative	Direct
Fly Anatomy (FA)	embryo	0	Moderately Informative	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

XA

Xenopus Anatomy (XA)

	XA term	FDR (all)	SDXA (four levels)	Annotation (direct or inherited)
Xenopus ANatomical entity (XAN)	anatomical structure	0	--	Direct
Xenopus ANatomical entity (XAN)	organism subdivision	0	--	Direct
Xenopus ANatomical entity (XAN)	anatomical region	0	--	Direct
Xenopus ANatomical entity (XAN)	multicellular anatomical structure	0	--	Direct
Xenopus ANatomical entity (XAN)	whole organism	1	--	Inherited

	XA term	FDR (all)	SDXA (four levels)	Annotation (direct or inherited)
Xenopus DEvelopment stage (XDE)	NF stage	0	--	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

AP

Arabidopsis Plant Ontology (AP)

	AP term	FDR (all)	SDAP (four levels)	Annotation (direct or inherited)
Plant ANatomical entity (PAN)	cauline leaf	0	--	Direct
Plant ANatomical entity (PAN)	shoot apex	0	--	Direct
Plant ANatomical entity (PAN)	stomatal complex	0	--	Direct
Plant ANatomical entity (PAN)	epidermal cell	0	--	Direct
Plant ANatomical entity (PAN)	shoot internode	0	--	Direct
Plant ANatomical entity (PAN)	epidermis	0	--	Direct
Plant ANatomical entity (PAN)	phyllome	0	--	Direct
Plant ANatomical entity (PAN)	shoot epidermis	0	--	Direct
Plant ANatomical entity (PAN)	leaf lamina base	0	--	Direct
Plant ANatomical entity (PAN)	plant cell	0	--	Direct
Plant ANatomical entity (PAN)	root	0	--	Direct
Plant ANatomical entity (PAN)	shoot system	0	--	Direct
Plant ANatomical entity (PAN)	portion of plant tissue	0	--	Direct
Plant ANatomical entity (PAN)	plant organ	0	--	Direct
Plant ANatomical entity (PAN)	plant embryo	0	--	Direct
Plant ANatomical entity (PAN)	vascular leaf	0	--	Direct
Plant ANatomical entity (PAN)	sporophyll	0	--	Direct
Plant ANatomical entity (PAN)	stamen	0	--	Direct
Plant ANatomical entity (PAN)	carpel	0	--	Direct
Plant ANatomical entity (PAN)	sepal	0	--	Direct
Plant ANatomical entity (PAN)	petal	0	--	Direct
Plant ANatomical entity (PAN)	stem	0	--	Direct
Plant ANatomical entity (PAN)	pedicel	0	--	Direct
Plant ANatomical entity (PAN)	perianth	0	--	Direct
Plant ANatomical entity (PAN)	corolla	0	--	Direct
Plant ANatomical entity (PAN)	calyx	0	--	Direct
Plant ANatomical entity (PAN)	androecium	0	--	Direct
Plant ANatomical entity (PAN)	gynoecium	0	--	Direct
Plant ANatomical entity (PAN)	inflorescence branch	0	--	Direct
Plant ANatomical entity (PAN)	petiole	0	--	Direct
Plant ANatomical entity (PAN)	leaf lamina	0	--	Direct
Plant ANatomical entity (PAN)	inflorescence axis	0	--	Direct
Plant ANatomical entity (PAN)	leaf apex	0	--	Direct
Plant ANatomical entity (PAN)	stem internode	0	--	Direct
Plant ANatomical entity (PAN)	cardinal organ part	0	--	Direct
Plant ANatomical entity (PAN)	plant axis	0	--	Direct
Plant ANatomical entity (PAN)	collective leaf structure	0	--	Direct
Plant ANatomical entity (PAN)	lamina	0	--	Direct
Plant ANatomical entity (PAN)	stalk	0	--	Direct
Plant ANatomical entity (PAN)	branch	0	--	Direct
Plant ANatomical entity (PAN)	reproductive shoot system	0	--	Direct
Plant ANatomical entity (PAN)	phyllome apex	0	--	Direct
Plant ANatomical entity (PAN)	shoot epidermal cell	0	--	Direct
Plant ANatomical entity (PAN)	multi-tissue plant structure	0	--	Direct
Plant ANatomical entity (PAN)	collective plant structure	0	--	Direct
Plant ANatomical entity (PAN)	plant structure	1	--	Inherited
Plant ANatomical entity (PAN)	collective plant organ structure	1	--	Inherited
Plant ANatomical entity (PAN)	phyllome lamina	1	--	Inherited
Plant ANatomical entity (PAN)	organ lamina	1	--	Inherited
Plant ANatomical entity (PAN)	whole plant	0	Least Informative	Direct
Plant ANatomical entity (PAN)	guard cell	0	Least Informative	Direct
Plant ANatomical entity (PAN)	seed	0	Least Informative	Direct
Plant ANatomical entity (PAN)	portion of meristem tissue	0	Least Informative	Direct
Plant ANatomical entity (PAN)	megasporophyll	0	Least Informative	Direct
Plant ANatomical entity (PAN)	microsporophyll	0	Least Informative	Direct
Plant ANatomical entity (PAN)	flower	0	Least Informative	Direct
Plant ANatomical entity (PAN)	inflorescence	0	Least Informative	Direct
Plant ANatomical entity (PAN)	collective phyllome structure	0	Least Informative	Direct
Plant ANatomical entity (PAN)	root system	0	Least Informative	Direct
Plant ANatomical entity (PAN)	shoot axis	0	Least Informative	Direct
Plant ANatomical entity (PAN)	leaf	0	Least Informative	Direct
Plant ANatomical entity (PAN)	cardinal part of multi-tissue plant structure	0	Least Informative	Direct
Plant ANatomical entity (PAN)	inflorescence meristem	0	Moderately Informative	Direct
Plant ANatomical entity (PAN)	cotyledon	0	Moderately Informative	Direct

	AP term	FDR (all)	SDAP (four levels)	Annotation (direct or inherited)
Plant structure DEvelopment stage (PDE)	whole plant development stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	1 main shoot growth stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	leaf production stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	sporophyte vegetative stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	floral organ differentiation stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	corolla development stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	flowering stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	plant embryo stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	collective plant organ structure development stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	plant organ development stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	reproductive shoot system development stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	collective phyllome structure development stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	phyllome development stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	floral organ formation stage	0	--	Direct
Plant structure DEvelopment stage (PDE)	leaf development stage	1	--	Inherited
Plant structure DEvelopment stage (PDE)	flower development stage	1	--	Inherited
Plant structure DEvelopment stage (PDE)	life of whole plant stage	1	--	Inherited
Plant structure DEvelopment stage (PDE)	shoot system development stage	1	--	Inherited
Plant structure DEvelopment stage (PDE)	sporophyte development stage	1	--	Inherited
Plant structure DEvelopment stage (PDE)	4 leaf senescence stage	0	Least Informative	Direct
Plant structure DEvelopment stage (PDE)	E expanded cotyledon stage	0	Least Informative	Direct
Plant structure DEvelopment stage (PDE)	F mature embryo stage	0	Least Informative	Direct
Plant structure DEvelopment stage (PDE)	C globular stage	0	Least Informative	Direct
Plant structure DEvelopment stage (PDE)	D bilateral stage	0	Least Informative	Direct
Plant structure DEvelopment stage (PDE)	LP.12 twelve leaves visible stage	0	Least Informative	Direct
Plant structure DEvelopment stage (PDE)	LP.08 eight leaves visible stage	0	Least Informative	Direct
Plant structure DEvelopment stage (PDE)	LP.02 two leaves visible stage	0	Least Informative	Direct
Plant structure DEvelopment stage (PDE)	LP.10 ten leaves visible stage	0	Least Informative	Direct
Plant structure DEvelopment stage (PDE)	LP.04 four leaves visible stage	0	Least Informative	Direct
Plant structure DEvelopment stage (PDE)	LP.06 six leaves visible stage	0	Least Informative	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

EC

Enzyme Commission (EC)

	EC term	FDR (all)	SDEC (four levels)	Annotation (direct or inherited)
Enzyme Commission (EC)	Acting on ATP; involved in cellular and subcellular movement	0.000000000003337	--	Direct
Enzyme Commission (EC)	Acting on ester bonds	0.1146	--	Inherited
Enzyme Commission (EC)	Hydrolases	0	Least Informative	Direct
Enzyme Commission (EC)	Acting on acid anhydrides	0.0005598	Moderately Informative	Direct
Enzyme Commission (EC)	Exoribonucleases producing 5'-phosphomonoesters	2.574e-16	Informative	Direct
Enzyme Commission (EC)	RNA helicase	0.000000000000001518	Informative	Direct
Enzyme Commission (EC)	Poly(A)-specific ribonuclease	0	Highly Informative	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

CC

CTD Chemicals (CC)

	CC term	FDR (all)	SDCC (four levels)	Annotation (direct or inherited)
CTD Chemicals (CC)	Heterocyclic Compounds	0	--	Direct
CTD Chemicals (CC)	Heterocyclic Compounds, 1-Ring	0	--	Direct
CTD Chemicals (CC)	Hydrocarbons	0	--	Direct
CTD Chemicals (CC)	Hydrocarbons, Aromatic	0	--	Direct
CTD Chemicals (CC)	Hydrocarbons, Cyclic	0	--	Direct
CTD Chemicals (CC)	Inorganic Chemicals	0	--	Direct
CTD Chemicals (CC)	Organic Chemicals	0	--	Direct
CTD Chemicals (CC)	Polycyclic Compounds	0	--	Direct
CTD Chemicals (CC)	Enzyme Inhibitors	0.0004193	--	Direct
CTD Chemicals (CC)	Pharmacologic Actions	0.4277	--	Inherited
CTD Chemicals (CC)	Chemical Actions and Uses	0.4998	Least Informative	Inherited
CTD Chemicals (CC)	Molecular Mechanisms of Pharmacological Action	0.0004957	Moderately Informative	Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

Distribution on sTOL

Plot distribution on species Tree Of Life (sTOL) for this domain, i.e., present or absent across genomes/tips

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R3H domain superfamily