dcGO - A comprehensive domain-centric ontology resource for post-genomic research on functions, phenotypes, diseases and more   
  
  

Cysteine-rich DNA binding domain, (DM domain) superfamily

Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Small proteins [ 56992] (90)
Fold:   Cysteine-rich DNA binding domain, (DM domain) [ 82926]
Superfamily:   Cysteine-rich DNA binding domain, (DM domain) [ 82927]
Families:   Cysteine-rich DNA binding domain, (DM domain) [ 82928]

MP

Mouse Phenotype (MP)

MP term FDR (all) SDMP (four levels) Annotation (direct or inherited)
Mammalian Phenotype (MP)abnormal meiosis0.0001507--Direct
Mammalian Phenotype (MP)reproductive system phenotype0.006284--Inherited
Mammalian Phenotype (MP)abnormal gametogenesis0.4866--Inherited
Mammalian Phenotype (MP)abnormal reproductive system morphology0.0009052Moderately InformativeDirect
Mammalian Phenotype (MP)abnormal spermatogenesis0.006565InformativeInherited
Mammalian Phenotype (MP)abnormal male meiosis0.00008977Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

WP

Worm Phenotype (WP)

WP term FDR (all) SDWP (four levels) Annotation (direct or inherited)
Worm Phenotype (WP)embryonic lethal0--Direct
Worm Phenotype (WP)lethal0--Direct
Worm Phenotype (WP)fertility variant0--Direct
Worm Phenotype (WP)development variant0--Direct
Worm Phenotype (WP)morphology variant0--Direct
Worm Phenotype (WP)organism development variant0--Direct
Worm Phenotype (WP)organism morphology variant0--Direct
Worm Phenotype (WP)organ system physiology variant0--Direct
Worm Phenotype (WP)reproductive system physiology variant0--Direct
Worm Phenotype (WP)maternal sterile0--Direct
Worm Phenotype (WP)hermaphrodite sterile0--Direct
Worm Phenotype (WP)embryonic development variant0--Direct
Worm Phenotype (WP)hermaphrodite fertility variant0--Direct
Worm Phenotype (WP)hermaphrodite fertility reduced0--Direct
Worm Phenotype (WP)fertility reduced0--Direct
Worm Phenotype (WP)hermaphrodite morphology variant0.0000000008723--Direct
Worm Phenotype (WP)sexually dimorphic morphology variant0.000123--Direct
Worm Phenotype (WP)physiology variant1--Inherited
Worm Phenotype (WP)sterile1--Inherited
Worm Phenotype (WP)cell development variant0.3044Least InformativeInherited
Worm Phenotype (WP)organism segment morphology variant0.05959Moderately InformativeInherited
Worm Phenotype (WP)body region morphology variant0.06024Moderately InformativeInherited
Worm Phenotype (WP)tail morphology variant0.00007141InformativeDirect
Worm Phenotype (WP)male morphology variant0.00009339InformativeDirect
Worm Phenotype (WP)cell fusion variant0.000002638Highly InformativeDirect
Worm Phenotype (WP)male tail morphology variant0.000005141Highly InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

FP

Fly Phenotype (FP)

FP term FDR (all) SDFP (four levels) Annotation (direct or inherited)
Fly Phenotype (FP)phenotype0--Direct
Fly Phenotype (FP)visible0InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

FA

Fly Anatomy (FA)

FA term FDR (all) SDFA (four levels) Annotation (direct or inherited)
Fly Anatomy (FA)organism0--Direct
Fly Anatomy (FA)tagma0--Direct
Fly Anatomy (FA)segment0--Direct
Fly Anatomy (FA)thoracic segment0--Direct
Fly Anatomy (FA)mesothoracic segment0--Direct
Fly Anatomy (FA)adult thorax0--Direct
Fly Anatomy (FA)adult thoracic segment0--Direct
Fly Anatomy (FA)adult mesothoracic segment0--Direct
Fly Anatomy (FA)adult external thorax0--Direct
Fly Anatomy (FA)organ system0--Direct
Fly Anatomy (FA)integumentary system0--Direct
Fly Anatomy (FA)tagmatic subdivision of integument0--Direct
Fly Anatomy (FA)multicellular structure0--Direct
Fly Anatomy (FA)anatomical structure1--Inherited
Fly Anatomy (FA)material anatomical entity1--Inherited
Fly Anatomy (FA)anterior-posterior subdivision of organism1--Inherited
Fly Anatomy (FA)adult0Least InformativeDirect
Fly Anatomy (FA)organism subdivision0Least InformativeDirect
Fly Anatomy (FA)organ system subdivision0Least InformativeDirect
Fly Anatomy (FA)thorax0Moderately InformativeDirect
Fly Anatomy (FA)adult tagma0Moderately InformativeDirect
Fly Anatomy (FA)adult segment0Moderately InformativeDirect
Fly Anatomy (FA)adult integumentary system0Moderately InformativeDirect
Fly Anatomy (FA)appendage0Moderately InformativeDirect
Fly Anatomy (FA)region of integument0Moderately InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

ZA

Zebrafish Anatomy (ZA)

ZA term FDR (all) SDZA (four levels) Annotation (direct or inherited)
Zebrafish Anatomy (ZA)whole organism0--Direct
Zebrafish Anatomy (ZA)anatomical structure1--Inherited
Zebrafish Anatomy (ZA)portion of tissue0Moderately InformativeDirect

LINKTO: Domain2BO Download and Domain2BO Algorithm

XA

Xenopus Anatomy (XA)

XA term FDR (all) SDXA (four levels) Annotation (direct or inherited)
Xenopus ANatomical entity (XAN)head region0--Direct
Xenopus ANatomical entity (XAN)central nervous system0--Direct
Xenopus ANatomical entity (XAN)anatomical structure0--Direct
Xenopus ANatomical entity (XAN)anatomical group0--Direct
Xenopus ANatomical entity (XAN)primary germ layer0--Direct
Xenopus ANatomical entity (XAN)organism subdivision0--Direct
Xenopus ANatomical entity (XAN)compound organ0--Direct
Xenopus ANatomical entity (XAN)anatomical region0--Direct
Xenopus ANatomical entity (XAN)multicellular anatomical structure0--Direct
Xenopus ANatomical entity (XAN)anatomical system1--Inherited
Xenopus ANatomical entity (XAN)whole organism1--Inherited
Xenopus ANatomical entity (XAN)embryo0Least InformativeDirect
Xenopus ANatomical entity (XAN)nervous system0Least InformativeDirect
Xenopus ANatomical entity (XAN)head0Least InformativeDirect
Xenopus ANatomical entity (XAN)tissue0Least InformativeDirect
Xenopus ANatomical entity (XAN)cavitated compound organ0Least InformativeDirect
Xenopus ANatomical entity (XAN)brain0Moderately InformativeDirect
Xenopus ANatomical entity (XAN)embryonic structure0Moderately InformativeDirect
 
XA term FDR (all) SDXA (four levels) Annotation (direct or inherited)
Xenopus DEvelopment stage (XDE)NF stage0--Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

CC

CTD Chemicals (CC)

CC term FDR (all) SDCC (four levels) Annotation (direct or inherited)
CTD Chemicals (CC)Heterocyclic Compounds0--Direct
CTD Chemicals (CC)Heterocyclic Compounds, 1-Ring0--Direct
CTD Chemicals (CC)Organic Chemicals0--Direct

LINKTO: Domain2BO Download and Domain2BO Algorithm

Distribution on sTOL

Plot distribution on species Tree Of Life (sTOL) for this domain, i.e., present or absent across genomes/tips
Plot tree as:   Download Newick format tree:   Browsing in TREE OF LIFE:
(show help)