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Enzyme Commission (EC): Acting on a sulfur group of donors 
(show info)
Biomedical Ontology
Like Gene Ontology (GO), biomedical ontology such as phenotype ontology classifies and organizes gene-mutant/null phenotypic information from the very general at the top to more specific terms in the directed acyclic graph (DAG) by viewing an individual term as a node and its relations to parental terms (allowing for multiple parents) as directed edges. To navigate this hierarchy, we display all parental phenotypic terms to the current phenotypic term of interest ordered by their shortest distances to the current term. Also, only direct children phenotypic terms of the current phenotypic term are listed. Biomedical ontologies we have incorporated are as follows:
- Disease Ontology (DO) Ontology DO semantically integrates disease and medical vocabularies through extensive cross mapping of DO terms to MeSH, ICD, NCI’s thesaurus, SNOMED and OMIM.
- Human Phenotype (HP) Ontology HP captures phenotypic abnormalities that are described in OMIM, along with the corresponding disease-causing genes. It includes three complementary biological concepts: Mode_of_Inheritance (MI), ONset_and_clinical_course (ON), and Phenotypic_Abnormality (PA).
- Mouse Phenotype (MP) Ontology MP describes phenotypes of the mouse after a specific gene is genetically disrupted. Using it, Mouse Genome Informatics (MGI) provides high-coverate gene-level phenotypes for the mouse.
- Worm Phenotype (WP) Ontology WP classifies and organizes phenotype descriptions for C. elegans and other nematodes. Using it, WormBase provides primary resource for phenotype annotations for C. elegans.
- Yeast Phenotype (YP) Ontology Based on YP which is the major contributor to the ‘Ascomycete phenotype ontology’, Saccharomyces Genome Database (SGD) provides single mutant phenotypes for every gene in the yeast genome.
- Fly Phenotype (FP) Ontology FP refers to FlyBase controlled vocabulary. Specifically, a structured controlled vocabulary is used for the annotation of alleles (for their mutagen etc) in FlyBase.
- Fly Anatomy (FA) Ontology FA is a structured controlled vocabulary of the anatomy of Drosophila melanogaster, used for the description of phenotypes and where a gene is expressed.
- Zebrafish Anatomy (ZA) Ontology ZA displays anatomical terms of the zebrafish using standard anatomical nomenclature, together with affected genes.
- Xenopus Anatomy (XA) Ontology XA represents the lineage of tissues and the timing of development for frogs (Xenopus laevis and Xenopus tropicalis). It is used to annotate Xenopus gene expression patterns and mutant and morphant phenotypes.
- Arabidopsis Plant Ontology (AP) Ontology As a major contributor to Plant Ontology which describes plant anatomical and morphological structures (AN) and growth and developmental stages (DE), the Arabidopsis Information Resource (TAIR) provides arabidopsis plant ontology annotations for the model higher plant Arabidopsis thaliana.
- Enzyme Commission (EC) Ontology Each enzyme is allocated a four-digit EC number, the first three digits of which define the reaction catalysed and the fourth of which is a unique identifier (serial number). Each enzyme is also assigned a systematic name that uniquely defines the reaction catalysed.
- UniProtKB KeyWords (KW) Ontology Keywords in UniProtKB are controlled vocabulary, providing a summary of the entry content and are used to index UniProtKB/Swiss-Prot entries based on 10 categories (the category "Technical term" being excluded here). Each keyword is attributed manually to UniProtKB/Swiss-Prot entries and automatically to UniProtKB/TrEMBL entries (according to specific annotation rules).
- CTD Diseases (CD) Ontology CD is MEDIC disease vocabulary that is modified by CTD from the "Diseases" [C] branch of Medical Subject Headings (MeSH), combined with genetic disorders from the Online Mendelian Inheritance in OMIM database.
- CTD Chemicals (CC) Ontology CC is chemical vocabulary that is adapted by CTD from the "Chemicals and Drugs" category and Supplementary Concept Records of Medical Subject Headings (MeSH, a hierarchical vocabulary used to index articles for MEDLINE/PubMed).
Jump to [ Top · Hierarchy · Annotations ]
Root: EC Hierarchy (from IntEnz release 70)
Jump to [ Top · Hierarchy ]
Superfamily( show details)
Highlighted in gray are those with FDR_all>0.001
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| Thioredoxin-like | 0 | DIRECT |
| Mss4-like | 0 | DIRECT |
| Ferredoxin thioredoxin reductase (FTR), catalytic beta chain | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Adenine nucleotide alpha hydrolases-like | 0 | DIRECT |
| Nitrite/Sulfite reductase N-terminal domain-like | 0 | DIRECT |
| 3-carboxy-cis,cis-mucoante lactonizing enzyme | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| FAD/NAD(P)-binding domain | 0 | DIRECT |
| Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| GST C-terminal domain-like | 0.000000000000001017 | DIRECT |
| ParB/Sulfiredoxin | 0.000000000000007489 | DIRECT |
| Riboflavin synthase domain-like | 0.000000000000244 | DIRECT |
| Ferredoxin reductase-like, C-terminal NADP-linked domain | 0.000000000000421 | DIRECT |
| C-type lectin-like | 0.0000006406 | DIRECT |
| Flavoproteins | 0.000001466 | DIRECT |
| Respiratory nitrate reductase 1 gamma chain | 0.000008081 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0.0008008 | DIRECT |
| Cysteine-rich domain | 0.001072 | INHERITED FROM: With NAD(+) or NADP(+) as acceptor || Protein-disulfide reductase |
| alpha-helical ferredoxin | 0.007167 | INHERITED FROM: With other, known, acceptors || With an iron-sulfur protein as acceptor || Ferredoxin:CoB-CoM heterodisulfide reductase |
| Cytochrome c | 0.01812 | INHERITED FROM: With a cytochrome as acceptor || Thiosulfate dehydrogenase |
| E set domains | 0.06477 | INHERITED FROM: Sulfite oxidase || With oxygen as acceptor |
| Nucleotide-binding domain | 0.07499 | INHERITED FROM: Trypanothione-disulfide reductase || With NAD(+) or NADP(+) as acceptor |
| Cytochrome b5-like heme/steroid binding domain | 0.1864 | INHERITED FROM: Sulfite oxidase || With oxygen as acceptor |
| ADC-like | 0.307 | INHERITED FROM: Respiratory dimethylsulfoxide reductase || With a quinone or similar compound as acceptor |
| 4Fe-4S ferredoxins | 0.3341 | INHERITED FROM: Dissimilatory sulfite reductase || With other, known, acceptors || With an iron-sulfur protein as acceptor || Ferredoxin:CoB-CoM heterodisulfide reductase || With other acceptors |
| Formate dehydrogenase/DMSO reductase, domains 1-3 | 0.4288 | INHERITED FROM: Respiratory dimethylsulfoxide reductase || With a quinone or similar compound as acceptor |
LINKTO: Domain2BO Download and Domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Family( show details)
Highlighted in gray are those with FDR_all>0.001
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| NADPH-cytochrome p450 reductase-like | 0 | DIRECT |
| NADPH-cytochrome p450 reductase FAD-binding domain-like | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| Sulfiredoxin-like | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| PAPS reductase-like | 0 | DIRECT |
| Ferredoxin thioredoxin reductase (FTR), catalytic beta chain | 0 | DIRECT |
| Thioltransferase | 0 | DIRECT |
| SelR domain | 0 | DIRECT |
| Duplicated SiR/NiR-like domains 1 and 3 | 0 | DIRECT |
| DsrA/DsrB N-terminal-domain-like | 0 | DIRECT |
| Cytochrome p450 reductase N-terminal domain-like | 0 | DIRECT |
| C1-like domain | 0 | DIRECT |
| Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) | 0 | DIRECT |
| FAD/NAD-linked reductases, N-terminal and central domains | 0 | DIRECT |
| Glutathione S-transferase (GST), N-terminal domain | 0.000000000001552 | DIRECT |
| Glutathione S-transferase (GST), C-terminal domain | 0.00000000002744 | DIRECT |
| Sulfatase-modifying factor-like | 0.0000006219 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0.000812 | DIRECT |
| Molybdenum-containing oxidoreductases-like dimerisation domain | 0.0009628 | DIRECT |
| Pyruvate-ferredoxin oxidoreductase, PFOR, domain II | 0.003717 | INHERITED FROM: Assimilatory sulfite reductase (NADPH) || With NAD(+) or NADP(+) as acceptor |
| Ferredoxin domains from multidomain proteins | 0.098 | INHERITED FROM: Dissimilatory sulfite reductase || With other acceptors |
| Cytochrome b5 | 0.1583 | INHERITED FROM: Sulfite oxidase || With oxygen as acceptor |
| Formate dehydrogenase/DMSO reductase, C-terminal domain | 0.4225 | INHERITED FROM: Respiratory dimethylsulfoxide reductase || With a quinone or similar compound as acceptor |
| Formate dehydrogenase/DMSO reductase, domains 1-3 | 0.4278 | INHERITED FROM: Respiratory dimethylsulfoxide reductase || With a quinone or similar compound as acceptor |
| Glutathione peroxidase-like | 0.7348 | INHERITED FROM: Peptide-methionine (R)-S-oxide reductase || Protein-disulfide reductase |
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| NADPH-cytochrome p450 reductase-like | 0 | Direct |
| NADPH-cytochrome p450 reductase FAD-binding domain-like | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| Sulfiredoxin-like | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| PAPS reductase-like | 0 | Direct |
| Ferredoxin thioredoxin reductase (FTR), catalytic beta chain | 0 | Direct |
| Thioltransferase | 0 | Direct |
| SelR domain | 0 | Direct |
| Duplicated SiR/NiR-like domains 1 and 3 | 0 | Direct |
| DsrA/DsrB N-terminal-domain-like | 0 | Direct |
| Cytochrome p450 reductase N-terminal domain-like | 0 | Direct |
| C1-like domain | 0 | Direct |
| Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) | 0 | Direct |
| FAD/NAD-linked reductases, N-terminal and central domains | 0 | Direct |
| Glutathione S-transferase (GST), N-terminal domain | 0.000000000001552 | Direct |
| Glutathione S-transferase (GST), C-terminal domain | 0.00000000002744 | Direct |
| Sulfatase-modifying factor-like | 0.0000006219 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0.000812 | Direct |
| Molybdenum-containing oxidoreductases-like dimerisation domain | 0.0009628 | Direct |
| Pyruvate-ferredoxin oxidoreductase, PFOR, domain II | 0.003717 | Inherited |
| Ferredoxin domains from multidomain proteins | 0.098 | Inherited |
| Cytochrome b5 | 0.1583 | Inherited |
| Formate dehydrogenase/DMSO reductase, C-terminal domain | 0.4225 | Inherited |
| Formate dehydrogenase/DMSO reductase, domains 1-3 | 0.4278 | Inherited |
| Glutathione peroxidase-like | 0.7348 | Inherited |
LINKTO: Domain2BO Download and Domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Single)( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| Nitrite/Sulfite reductase N-terminal domain-like | 0 | DIRECT |
| FAD/NAD(P)-binding domain | 0 | DIRECT |
| Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) | 0 | DIRECT |
| 3-carboxy-cis,cis-mucoante lactonizing enzyme | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| Thioredoxin-like | 0 | DIRECT |
| Ferredoxin thioredoxin reductase (FTR), catalytic beta chain | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Adenine nucleotide alpha hydrolases-like | 0 | DIRECT |
| Mss4-like | 0 | DIRECT |
| GST C-terminal domain-like | 7.073e-16 | DIRECT |
| ParB/Sulfiredoxin | 0.000000000000005248 | DIRECT |
| Riboflavin synthase domain-like | 0.0000000000001737 | DIRECT |
| Ferredoxin reductase-like, C-terminal NADP-linked domain | 0.0000000000003007 | DIRECT |
| C-type lectin-like | 0.0000004973 | DIRECT |
| Flavoproteins | 0.000001145 | DIRECT |
| Respiratory nitrate reductase 1 gamma chain | 0.000006375 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0.0006584 | DIRECT |
| Cysteine-rich domain | 0.000884 | DIRECT |
| alpha-helical ferredoxin | 0.006039 | INHERITED FROM: With an iron-sulfur protein as acceptor || Ferredoxin:CoB-CoM heterodisulfide reductase || With other, known, acceptors |
| Cytochrome c | 0.01545 | INHERITED FROM: Thiosulfate dehydrogenase || With a cytochrome as acceptor |
| E set domains | 0.05618 | INHERITED FROM: Sulfite oxidase || With oxygen as acceptor |
| Nucleotide-binding domain | 0.06513 | INHERITED FROM: With NAD(+) or NADP(+) as acceptor || Trypanothione-disulfide reductase |
| Cytochrome b5-like heme/steroid binding domain | 0.1648 | INHERITED FROM: Sulfite oxidase || With oxygen as acceptor |
| ADC-like | 0.277 | INHERITED FROM: Respiratory dimethylsulfoxide reductase || With a quinone or similar compound as acceptor |
| 4Fe-4S ferredoxins | 0.3019 | INHERITED FROM: With other acceptors || With an iron-sulfur protein as acceptor || Dissimilatory sulfite reductase || Ferredoxin:CoB-CoM heterodisulfide reductase || With other, known, acceptors |
| Formate dehydrogenase/DMSO reductase, domains 1-3 | 0.3897 | INHERITED FROM: Respiratory dimethylsulfoxide reductase || With a quinone or similar compound as acceptor |
| TK C-terminal domain-like | 0.6609 | INHERITED FROM: Assimilatory sulfite reductase (NADPH) |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Duplex) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52402,52833
52402 - Adenine nucleotide alpha hydrolases-like
52833 - Thioredoxin-like | 0 | DIRECT |
55124,54862
55124 - Nitrite/Sulfite reductase N-terminal domain-like
54862 - 4Fe-4S ferredoxins | 0 | DIRECT |
52833,55068
52833 - Thioredoxin-like
55068 - Peptide methionine sulfoxide reductase | 0 | DIRECT |
52833,57889
52833 - Thioredoxin-like
57889 - Cysteine-rich domain | 0 | DIRECT |
56014,55124
56014 - Nitrite and sulphite reductase 4Fe-4S domain-like
55124 - Nitrite/Sulfite reductase N-terminal domain-like | 0 | DIRECT |
55068,51316
55068 - Peptide methionine sulfoxide reductase
51316 - Mss4-like | 0 | DIRECT |
55124,56014
55124 - Nitrite/Sulfite reductase N-terminal domain-like
56014 - Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
51905,55424
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
55856,56524
55856 - Cytochrome b5-like heme/steroid binding domain
56524 - Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
52218,63380
52218 - Flavoproteins
63380 - Riboflavin synthase domain-like | 0 | DIRECT |
54862,56014
54862 - 4Fe-4S ferredoxins
56014 - Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
51905,54862
51905 - FAD/NAD(P)-binding domain
54862 - 4Fe-4S ferredoxins | 0 | DIRECT |
51905,52833
51905 - FAD/NAD(P)-binding domain
52833 - Thioredoxin-like | 0 | DIRECT |
63380,52343
63380 - Riboflavin synthase domain-like
52343 - Ferredoxin reductase-like, C-terminal NADP-linked domain | 5.316e-16 | DIRECT |
52833,47616
52833 - Thioredoxin-like
47616 - GST C-terminal domain-like | 0.0000000000000263 | DIRECT |
52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0.000000000001766 | DIRECT |
51971,51905
51971 - Nucleotide-binding domain
51905 - FAD/NAD(P)-binding domain | 0.00001126 | DIRECT |
46626,46626
46626 - Cytochrome c
46626 - Cytochrome c | 0.0001874 | DIRECT |
56524,81296
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0.0006584 | DIRECT |
53706,50692
53706 - Formate dehydrogenase/DMSO reductase, domains 1-3
50692 - ADC-like | 0.2405 | INHERITED FROM: Respiratory dimethylsulfoxide reductase || With a quinone or similar compound as acceptor |
51905,51905
51905 - FAD/NAD(P)-binding domain
51905 - FAD/NAD(P)-binding domain | 0.5861 | INHERITED FROM: Bacterial sulfide:quinone reductase || With a quinone or similar compound as acceptor |
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52402,52833
52402 - Adenine nucleotide alpha hydrolases-like
52833 - Thioredoxin-like | 0 | Direct |
55124,54862
55124 - Nitrite/Sulfite reductase N-terminal domain-like
54862 - 4Fe-4S ferredoxins | 0 | Direct |
52833,55068
52833 - Thioredoxin-like
55068 - Peptide methionine sulfoxide reductase | 0 | Direct |
52833,57889
52833 - Thioredoxin-like
57889 - Cysteine-rich domain | 0 | Direct |
56014,55124
56014 - Nitrite and sulphite reductase 4Fe-4S domain-like
55124 - Nitrite/Sulfite reductase N-terminal domain-like | 0 | Direct |
55068,51316
55068 - Peptide methionine sulfoxide reductase
51316 - Mss4-like | 0 | Direct |
55124,56014
55124 - Nitrite/Sulfite reductase N-terminal domain-like
56014 - Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
51905,55424
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
55856,56524
55856 - Cytochrome b5-like heme/steroid binding domain
56524 - Oxidoreductase molybdopterin-binding domain | 0 | Direct |
52218,63380
52218 - Flavoproteins
63380 - Riboflavin synthase domain-like | 0 | Direct |
54862,56014
54862 - 4Fe-4S ferredoxins
56014 - Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
51905,54862
51905 - FAD/NAD(P)-binding domain
54862 - 4Fe-4S ferredoxins | 0 | Direct |
51905,52833
51905 - FAD/NAD(P)-binding domain
52833 - Thioredoxin-like | 0 | Direct |
63380,52343
63380 - Riboflavin synthase domain-like
52343 - Ferredoxin reductase-like, C-terminal NADP-linked domain | 5.316e-16 | Direct |
52833,47616
52833 - Thioredoxin-like
47616 - GST C-terminal domain-like | 0.0000000000000263 | Direct |
52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0.000000000001766 | Direct |
51971,51905
51971 - Nucleotide-binding domain
51905 - FAD/NAD(P)-binding domain | 0.00001126 | Direct |
46626,46626
46626 - Cytochrome c
46626 - Cytochrome c | 0.0001874 | Direct |
56524,81296
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0.0006584 | Direct |
53706,50692
53706 - Formate dehydrogenase/DMSO reductase, domains 1-3
50692 - ADC-like | 0.2405 | Inherited |
51905,51905
51905 - FAD/NAD(P)-binding domain
51905 - FAD/NAD(P)-binding domain | 0.5861 | Inherited |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Triple) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52833,52833,57889
52833 - Thioredoxin-like
52833 - Thioredoxin-like
57889 - Cysteine-rich domain | 0 | DIRECT |
56014,55124,56014
56014 - Nitrite and sulphite reductase 4Fe-4S domain-like
55124 - Nitrite/Sulfite reductase N-terminal domain-like
56014 - Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
52218,63380,52343
52218 - Flavoproteins
63380 - Riboflavin synthase domain-like
52343 - Ferredoxin reductase-like, C-terminal NADP-linked domain | 0 | DIRECT |
52833,55068,51316
52833 - Thioredoxin-like
55068 - Peptide methionine sulfoxide reductase
51316 - Mss4-like | 0 | DIRECT |
55124,56014,55124
55124 - Nitrite/Sulfite reductase N-terminal domain-like
56014 - Nitrite and sulphite reductase 4Fe-4S domain-like
55124 - Nitrite/Sulfite reductase N-terminal domain-like | 0 | DIRECT |
51971,51905,55424
51971 - Nucleotide-binding domain
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
55856,56524,81296
55856 - Cytochrome b5-like heme/steroid binding domain
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0 | DIRECT |
55124,54862,56014
55124 - Nitrite/Sulfite reductase N-terminal domain-like
54862 - 4Fe-4S ferredoxins
56014 - Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
52833,52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0.000000003024 | DIRECT |
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52833,52833,57889
52833 - Thioredoxin-like
52833 - Thioredoxin-like
57889 - Cysteine-rich domain | 0 | Direct |
56014,55124,56014
56014 - Nitrite and sulphite reductase 4Fe-4S domain-like
55124 - Nitrite/Sulfite reductase N-terminal domain-like
56014 - Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
52218,63380,52343
52218 - Flavoproteins
63380 - Riboflavin synthase domain-like
52343 - Ferredoxin reductase-like, C-terminal NADP-linked domain | 0 | Direct |
52833,55068,51316
52833 - Thioredoxin-like
55068 - Peptide methionine sulfoxide reductase
51316 - Mss4-like | 0 | Direct |
55124,56014,55124
55124 - Nitrite/Sulfite reductase N-terminal domain-like
56014 - Nitrite and sulphite reductase 4Fe-4S domain-like
55124 - Nitrite/Sulfite reductase N-terminal domain-like | 0 | Direct |
51971,51905,55424
51971 - Nucleotide-binding domain
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
55856,56524,81296
55856 - Cytochrome b5-like heme/steroid binding domain
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0 | Direct |
55124,54862,56014
55124 - Nitrite/Sulfite reductase N-terminal domain-like
54862 - 4Fe-4S ferredoxins
56014 - Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
52833,52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0.000000003024 | Direct |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Plot distribution on species Tree Of Life (sTOL) for Superfamily and/or Family domains annotated by this EC term
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Plot tree as:
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Download Newick format tree:
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( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domain
architecture data for all genomes in SUPERFAMILY. The PAUP
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
Plot distribution on species Tree Of Life (sTOL) for single supra-domains annotated by this EC term
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Plot tree as:
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Download Newick format tree:
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Browsing in TREE OF LIFE:
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( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
|
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> BO Hierarchy > Acting on a sulfur group of donors
