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  Home > SCOP hierarchy > Domain combination - 101148

Domain combinations for 101148 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

101148 - Plant invertase/pectin methylesterase inhibitor

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Saccoglossus_kowalevskii_v3.0 0
Gallus_gallus_76_4   (Chicken)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_76_1   (Coelacanth)   0
Gadus_morhua_76_1   (Atlantic cod)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_76   (Vase tunicate)   0
Crassostrea_gigas_22   (Pacific oyster)   0
Helobdella_robusta_ 0
Capitella_sp._I_ 0
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   0
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   0
Drosophila_pseudoobscura_2.13 0
Drosophila_persimilis_1.3 0
Drosophila_ananassae_1.3 0
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   0
Anopheles_gambiae_49_3j   (African malaria mosquito)   0
Tribolium_castaneum_3.0   (Red flour beetle)   0
Acyrthosiphon_pisum_   (Pea aphid)   0
Strigamia_maritima_22 0
Pristionchus_pacificus_ 0
Meloidogyne_hapla_ 0
Trichinella_spiralis_22 0
Echinococcus_multilocularis_ 0
Echinococcus_granulosus_ 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   0
Sphaeroforma_arctica_JP610_ 0
Mortierella_verticillata_NRRL_6337_ 0
Rhizopus_oryzae_RA_99-880_ 0
Melampsora_laricis-populina_ 0
Sphaerobolus_stellatus_v1.0 0
Serpula_lacrymans_var._lacrymans_S7.9_ 0
Coniophora_puteana 0
Scleroderma_citrinum_Foug_A_v1.0 0
Schizophyllum_commune_ 0
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Gloeophyllum_trabeumv1.0 0
Sebacina_vermifera_MAFF_305830_v1.0 0
Fomitiporia_mediterranea_v1.0 0
Tulasnella_calospora_AL13/4D_v1.0 0
Phanerochaete_chrysosporium_RP-78_2.1 0
Dichomitus_squalens 0
Apiospora_montagnei_NRRL_25634_v1.0 0
Magnaporthe_grisea_70-15_ 0
Neurospora_tetrasperma_ 0
Neurospora_crassa_OR74A_ 0
Cryphonectria_parasitica_   (Chestnut blight fungus)   0
Verticillium_albo-atrum_VaMs.102_ 0
Fusarium_oxysporum_f._sp._lycopersici_4286_ 0
Fusarium_verticillioides_7600_ 0
Trichoderma_asperellum_CBS_433.97_v1.0 0
Trichoderma_atroviride_ 0
Trichoderma_reesei_1.2 0
Trichoderma_virens_Gv29-8_ 0
Trichoderma_longibrachiatum_ATCC_18648_v1.0 0
Trichoderma_harzianum_CBS_226.95_v1.0 0
Amorphotheca_resinae_v1.0   (Creosote fungus)   0
Botrytis_cinerea_B05.10_ 0
Sclerotinia_sclerotiorum_ 0
Didymella_exigua_CBS_183.55_v1.0 0
Setosphaeria_turcica_v1.0 0
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Cochliobolus_carbonum_26-R-13_v1.0 0
Alternaria_brassicicola_ 0
Cochliobolus_lunatus_m118_v2.0 0
Paracoccidioides_brasiliensis_Pb18_ 0
Ajellomyces_dermatitidis_SLH14081_ 0
Trichophyton_equinum_CBS_127.97_ 0
Trichophyton_rubrum_CBS_118892_ 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 0
Penicillium_chrysogenum_v1.0 0
Aspergillus_glaucus 0
Aspergillus_terreus_NIH2624_ 0
Candida_parapsilosis_ 0
Ashbya_gossypii_ATCC_10895_ 0
Saccharomyces_paradoxus_MIT 0
Saccharomyces_cerevisiae_76   (Baker's yeast)   0
Allomyces_macrogynus_ATCC_38327_ 0
Dictyostelium_discoideum 0
Selaginella_moellendorffii_ 0
Pinus_taeda   (Loblolly pine)   10
Picea_abies   (Norway spruce)   4
Eucalyptus_grandis_v201   (Rose gum)   21
Theobroma_cacao_B97-61/B2_v1   (Cacao)   18
Gossypium_raimondii_v221 32
Citrus_clementina_v165 20
Citrus_sinensis_v154   (Sweet orange)   18
Thellungiella_halophila_v173 33
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   45
Capsella_rubella_v183 39
Arabidopsis_lyrata_   (Lyrate rockcress)   48
Arabidopsis_thaliana_10   (Thale cress)   37
Carica_papaya_   (Papaya)   12
Medicago_truncatula_   (Barrel medic)   72
Phaseolus_vulgaris_v186   (French bean)   14
Glycine_max_v109   (Soybean)   29
Cucumis_sativus_v122   (Cucumber)   18
Fragaria_vesca_   (Wild strawberry)   23
Malus_domestica_v196   (Apple)   31
Prunus_persica_v139   (Peach)   15
Linum_usitatissimum_v200   (Flax)   36
Manihot_esculenta_v147   (Cassava)   29
Populus_trichocarpa_v156   (Black cottonwood)   19
Vitis_vinifera_   (Wine grape)   0
Mimulus_guttatus_v140   (Spotted monkey flower)   35
Solanum_lycopersicum_v.2.3   (Tomato)   25
Solanum_tuberosum_   (Potato)   46
Actinidia_chinensis_Hongyang_ 23
Aquilegia_coerulea_v195 5
Triticum_urartu_22 34
Triticum_aestivum_22   (Bread wheat)   37
Aegilops_tauschii_22 44
Brachypodium_distachyon_   (Stiff brome)   14
Oryza_barthii_22   (African wild rice)   19
Oryza_meridionalis_22 13
Oryza_glumaepatula_22 14
Oryza_glaberrima   (African rice)   14
Oryza_punctata_22 10
Oryza_nivara_22 10
Oryza_brachyantha_22   (Malo sina)   18
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   17
Oryza_sativa_v193   (Rice)   18
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   9
Panicum_virgatum_v202   (Switchgrass)   29
Setaria_italica_v164   (Foxtail millet)   11
Zea_mays_subsp._mays_   (Maize)   11
Zea_mays_v181   (Maize)   11
Sorghum_bicolor_   (Sorghum)   13
Musa_balbisiana   (Balbis banana)   15
Musa_acuminata_22   (Wild Malaysian banana)   9
Amborella_trichopoda_22 11
Physcomitrella_patens 1
Ostreococcus_lucimarinus_CCE9901_ 0
Cyanidioschyzon_merolae_strain_10D_22 0
Cyanidioschyzon_merolae 0
Bigelowiella_natans_CCMP2755_22 0
Leishmania_mexicana_2.4 0
Trypanosoma_vivax_ 0
Trypanosoma_brucei_gambiense_v4.1 0
Trypanosoma_brucei_TREU927_v4.1 0
Ectocarpus_siliculosus 0
Albugo_laibachii_22 0
Pythium_ultimum_v1.7-2 0
Pythium_aphanidermatum_DAOM_BR444_22 0
Phytophthora_sojae_1.1 0
Fragilariopsis_cylindrus 0
Paramecium_tetraurelia_ 0
Cryptosporidium_hominis 0
Cryptosporidium_parvum_Iowa_II 0
Babesia_bovis_T2Bo_ 0
Symbiodinium_minutum_clade_B1_v1.2 0
Naegleria_gruberi_ 0
Guillardia_theta_CCMP2712_v1.0_ 0
Emiliania_huxleyi_CCMP1516_ 0
Microcoleus_sp._PCC_7113 0
Bifidobacterium_dentium_Bd1 0
Actinomyces_sp._F0330 0
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 0
Desulfosporosinus_orientis_DSM_765 0
Desulfotomaculum_ruminis_DSM_2154 0
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 0
Bacillus_sp._JS 0
Bacillus_sp._1NLA3E 0
Bacillus_subtilis_subsp._subtilis_str._168 0
Bacillus_weihenstephanensis_KBAB4 0
Bacillus_thuringiensis_str._Al_Hakam 0
Bacillus_cereus_03BB102 0
Bacillus_anthracis_str._A0248 0
Bacillus_megaterium_DSM_319 0
Pelodictyon_phaeoclathratiforme_BU-1 0
Prevotella_denticola_F0289 0
Bacteroides_salanitronis_DSM_18170 0
Terriglobus_saanensis_SP1PR4 0
Bdellovibrio_bacteriovorus_HD100 0
Burkholderia_thailandensis_E264 0
Orientia_tsutsugamushi_str._Boryong 0
Mesorhizobium_loti_MAFF303099 0
Vibrio_cholerae_O395 0
Kangiella_koreensis_DSM_16069 0
Francisella_cf._novicida_3523 0
Methanosarcina_barkeri_str._Fusaro 0

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Strains
Genome     Number
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   0
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Paracoccidioides_brasiliensis_Pb01_ 0
Paracoccidioides_brasiliensis_Pb03_ 0
Ajellomyces_dermatitidis_ER-3_ 0
Histoplasma_capsulatum_H143 0
Saccharomyces_cerevisiae_CLIB324 0
Saccharomyces_cerevisiae_CBS7960 0
Saccharomyces_cerevisiae_FostersB 0
Saccharomyces_cerevisiae_VL3 0
Saccharomyces_cerevisiae_Vin13 0
Saccharomyces_cerevisiae_LalvinQA23 0
Saccharomyces_cerevisiae_AWRI796 0
Saccharomyces_cerevisiae_JAY291 0
Saccharomyces_cerevisiae_AWRI1631 0
Saccharomyces_cerevisiae_M22 0
Saccharomyces_cerevisiae_CLIB215 0
Saccharomyces_cerevisiae_YJM789_ 0
Saccharomyces_cerevisiae_YJM789 0
Saccharomyces_cerevisiae_RM11-1a 0
Saccharomyces_cerevisiae_RM11-1a_ 0
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   0
Batrachochytrium_dendrobatidis_JEL423_ 0
Batrachochytrium_dendrobatidis_JAM81_ 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   13
Hordeum_vulgare_22   (Domesticated barley)   17
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   12
Trypanosoma_brucei_Lister_427_v4.1 0
Streptomyces_rapamycinicus_NRRL_5491 0
Saccharothrix_espanaensis_DSM_44229 0
Corynebacterium_diphtheriae_31A 0
Desulfosporosinus_meridiei_DSM_13257 0
Lactobacillus_helveticus_R0052 0
Bacillus_subtilis_PY79 0
Bacillus_subtilis_XF-1 0
Bacillus_subtilis_QB928 0
Bacillus_subtilis_BSn5 0
Bacillus_subtilis_subsp._subtilis_str._BAB-1 0
Bacillus_subtilis_subsp._subtilis_str._BSP1 0
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 0
Bacillus_subtilis_subsp._subtilis_6051-HGW 0
Bacillus_subtilis_subsp._natto_BEST195 0
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 0
Bacillus_toyonensis_BCT-7112 0
Bacillus_thuringiensis_HD-771 0
Bacillus_thuringiensis_HD-789 0
Bacillus_thuringiensis_MC28 0
Bacillus_thuringiensis_serovar_chinensis_CT-43 0
Bacillus_thuringiensis_YBT-1518 0
Bacillus_thuringiensis_Bt407 0
Bacillus_thuringiensis_serovar_konkukian_str._97-27 0
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 0
Bacillus_thuringiensis_serovar_finitimus_YBT-020 0
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 0
Bacillus_cereus_FRI-35 0
Bacillus_cereus_biovar_anthracis_str._CI 0
Bacillus_cereus_AH820 0
Bacillus_cereus_AH187 0
Bacillus_cereus_B4264 0
Bacillus_cereus_G9842 0
Bacillus_cereus_Q1 0
Bacillus_cereus_F837/76 0
Bacillus_cereus_NC7401 0
Bacillus_cereus_E33L 0
Bacillus_cereus_ATCC_14579 0
Bacillus_cereus_ATCC_10987 0
Bacillus_anthracis_str._H9401 0
Bacillus_anthracis_str._CDC_684 0
Bacillus_anthracis_str._'Ames_Ancestor' 0
Bacillus_anthracis_str._Sterne 0
Bacillus_anthracis_str._Ames 0
Bacillus_megaterium_QM_B1551 0
Bdellovibrio_bacteriovorus_str._Tiberius 0
Ralstonia_solanacearum_PSI07 0
Variovorax_paradoxus_B4 0
Anaplasma_phagocytophilum_str._Dog2 0
Anaplasma_phagocytophilum_str._HZ2 0
Anaplasma_phagocytophilum_str._JM 0
Hyphomicrobium_denitrificans_1NES1 0
Vibrio_cholerae_M66-2 0
Vibrio_cholerae_O395 0
Vibrio_cholerae_IEC224 0
Vibrio_cholerae_O1_str._2010EL-1786 0
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 0
Alcanivorax_dieselolei_B5 0
Edwardsiella_tarda_FL6-60 0
Dickeya_dadantii_3937 0
Escherichia_coli_O55:H7_str._RM12579 0
Escherichia_coli_O157:H7_str._EC4115 0
Pseudomonas_aeruginosa_NCGM2.S1 0
Francisella_tularensis_subsp._holarctica_F92 0
Francisella_cf._novicida_Fx1 0

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Longest transcript per gene
Genome     Number
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Latimeria_chalumnae_69_1   (Coelacanth)   0
Gadus_morhua_69_1   (Atlantic cod)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_69   (Vase tunicate)   0
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   0
Arabidopsis_thaliana_10   (Thale cress)   36

Others
Genome     Number
Loa_loa_v3.3_(Request)   (Eye worm)   0
Picea_sitchensis__(Incomplete)   (Sitka spruce)   0
Lotus_japonicus__(Early_assembly) 11
Malus_x_domestica_(Duplicate)   (Apple)   31
Ricinus_communis__(Early_assembly)   (Castor bean)   16
Nicotiana_benthamiana_0.4.4_(Early_draft) 47
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   25
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   25
Phoenix_dactylifera__(Early_draft)   (Date palm)   7
NCBI_plasmid_sequences_(Plasmids) 0
TargetDB__(Targets) 43
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 75
UniProt__viral_sequences_(Viral) 0
STRING_v9.0.5_(STRING) 170
Protein_Data_Bank_(all_PDB_sequenc) 25
NCBI_2017_08_genome 1721
Uniprot_2018_03_genome 2154
NCBI_viral_sequences_(Viral) 0
Protozoadb_2010_08_(Protozoadb) 0
PDB_chains_(SCOP_1.75)_(PDB) 5

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.