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Home > SCOP hierarchy > Domain combination - 143791,54236,_gap_,54001,_gap_

Domain combinations for 143791,54236,_gap_,54001,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

143791 - DUSP-like
54236 - Ubiquitin-like
54001 - Cysteine proteinases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Choloepus_hoffmanni_76_1 (Hoffmann's two-fingered sloth) 1

Meleagris_gallopavo_76_2 (Turkey) 1

Gallus_gallus_76_4 (Chicken) 1

Anas_platyrhynchos_76_1.0 (Mallard) 1

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 1

Ficedula_albicollis_76_1.0 (Collared flycatcher) 1

Anolis_carolinensis_76_2.0 (Green anole) 0

Xenopus_tropicalis_76_4.2 (Tropical clawed frog) 1

Latimeria_chalumnae_76_1 (Coelacanth) 1

Lepisosteus_oculatus_76 (Spotted gar) 1

Takifugu_rubripes_76_4 (Torafugu) 2

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 1

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 1

Poecilia_formosa_76 (Amazon molly) 1

Helobdella_robusta_ 0

Populus_trichocarpa_v156 (Black cottonwood) 1

Vitis_vinifera_ (Wine grape) 1

Longest transcript per gene
Genome Number

Dasypus_novemcinctus_69_2 (Nine-banded armadillo) 1

Choloepus_hoffmanni_69_1 (Hoffmann's two-fingered sloth) 1

Meleagris_gallopavo_69_2 (Turkey) 1

Gallus_gallus_69_2 (Chicken) 1

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 1

Anolis_carolinensis_69_2.0 (Green anole) 1

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 1

Latimeria_chalumnae_69_1 (Coelacanth) 1

Takifugu_rubripes_69_4 (Torafugu) 1

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 1

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 1

Others
Genome Number

Ricinus_communis__(Early_assembly) (Castor bean) 1

STRING_v9.0.5_(STRING) 7

Uniprot_2018_03_genome 1092

NCBI_2017_08_genome 167

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