SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Home > SCOP hierarchy > Domain combination - 160800

Domain combinations for 160800 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

Jump to [ Top of page · Domain combinations in individual genomes ]

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Saccoglossus_kowalevskii_v3.0 0

Ciona_intestinalis_76 (Vase tunicate) 0

Adineta_vaga 9

Helobdella_robusta_ 0

Danaus_plexippus_OGS1.0 (Monarch butterfly) 0

Pogonomyrmex_barbatus_v1.2 (Red harvester ant) 0

Pristionchus_pacificus_ 0

Meloidogyne_incognita_ (Southern root-knot nematode) 0

Caenorhabditis_brenneri_ 0

Caenorhabditis_elegans_76_235 (Roundworm) 0

Conidiobolus_coronatus_NRRL28638_v1.0 0

Verticillium_albo-atrum_VaMs.102_ 0

Verticillium_dahliae_VdLs.17_ 0

Saccharomyces_mikatae_MIT 0

Pinus_taeda (Loblolly pine) 0

Arabidopsis_lyrata_ (Lyrate rockcress) 0

Medicago_truncatula_ (Barrel medic) 0

Actinidia_chinensis_Hongyang_ 0

Bigelowiella_natans_CCMP2755_22 0

Albugo_laibachii_22 0

Ichthyophthirius_multifiliis_strain_G5_ 0

Cryptosporidium_muris 0

Plasmodium_falciparum_3D7_ 0

Megamonas_hypermegale 0

Clostridium_difficile_630 0

Clostridium_perfringens_ATCC_13124 0

Clostridium_cellulovorans_743B 0

Clostridium_botulinum_A_str._ATCC_3502 0

Thermoanaerobacter_sp._X514 0

Carnobacterium_sp._17-4 1

Carnobacterium_sp._WN1359 1

Aerococcus_urinae_ACS-120-V-Col10a 1

Tetragenococcus_halophilus_NBRC_12172 1

Melissococcus_plutonius_DAT561 1

Enterococcus_sp._7L76 1

Enterococcus_hirae_ATCC_9790 1

Enterococcus_faecium_Aus0004 1

Enterococcus_faecalis_62 1

Weissella_koreensis_KACC_15510 1

Oenococcus_oeni_PSU-1 1

Leuconostoc_sp._C2 1

Leuconostoc_kimchii_IMSNU_11154 1

Leuconostoc_citreum_KM20 1

Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 1

Leuconostoc_gasicomitatum_LMG_18811 1

Lactobacillus_casei_ATCC_334 1

Lactobacillus_kefiranofaciens_ZW3 1

Lactobacillus_crispatus_ST1 1

Lactobacillus_rhamnosus_Lc_705 1

Lactobacillus_johnsonii_FI9785 1

Lactobacillus_sanfranciscensis_TMW_1.1304 1

Lactobacillus_ruminis_ATCC_27782 1

Lactobacillus_fermentum_IFO_3956 1

Lactobacillus_amylovorus_GRL1118 1

Lactobacillus_sakei_subsp._sakei_23K 1

Lactobacillus_reuteri_DSM_20016 1

Lactobacillus_gasseri_ATCC_33323 1

Lactobacillus_plantarum_JDM1 1

Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 1

Lactobacillus_buchneri_NRRL_B-30929 1

Lactobacillus_buchneri 1

Lactobacillus_brevis_ATCC_367 1

Lactobacillus_acidophilus_30SC 1

Pediococcus_claussenii_ATCC_BAA-344 1

Pediococcus_pentosaceus_ATCC_25745 1

Lactococcus_garvieae_ATCC_49156 1

Lactococcus_lactis_subsp._cremoris_MG1363 1

Streptococcus_sp._I-P16 1

Streptococcus_sp._I-G2 1

Streptococcus_intermedius_JTH08 1

Streptococcus_gallolyticus_UCN34 1

Streptococcus_pseudopneumoniae_IS7493 1

Streptococcus_pasteurianus_ATCC_43144 1

Streptococcus_equi_subsp._equi_4047 1

Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 1

Streptococcus_infantarius_subsp._infantarius_CJ18 1

Streptococcus_macedonicus_ACA-DC_198 1

Streptococcus_mitis_B6 1

Streptococcus_uberis_0140J 1

Streptococcus_parauberis_KCTC_11537 1

Streptococcus_parasanguinis_ATCC_15912 1

Streptococcus_pyogenes_str._Manfredo 1

Streptococcus_pneumoniae_P1031 1

Streptococcus_agalactiae_A909 1

Streptococcus_mutans_NN2025 1

Streptococcus_thermophilus_LMD-9 1

Streptococcus_suis_P1/7 1

Streptococcus_sanguinis_SK36 1

Streptococcus_salivarius_57.I 1

Streptococcus_oralis_Uo5 1

Streptococcus_gordonii_str._Challis_substr._CH1 1

Spirosoma_linguale_DSM_74 0

Borrelia_recurrentis_A1 0

Borrelia_duttonii_Ly 0

Borrelia_crocidurae_str._Achema 0

Sebaldella_termitidis_ATCC_33386 0

Campylobacter_sp._03-427 0

Polymorphum_gilvum_SL003B-26A1 0

Rickettsia_bellii_OSU_85-389 0

Rickettsia_montanensis_str._OSU_85-930 0

Pseudoalteromonas_sp._SM9913 0

Rahnella_sp._Y9602 0

Methanohalobium_evestigatum_Z-7303 0

Methanococcoides_burtonii_DSM_6242 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome Number

Ciona_intestinalis_69 (Vase tunicate) 0

Caenorhabditis_elegans_69_215 (Roundworm) 0

Others
Genome Number

Ricinus_communis__(Early_assembly) (Castor bean) 0

Nicotiana_benthamiana_0.4.4_(Early_draft) 0

NCBI_plasmid_sequences_(Plasmids) 0

Protozoadb_2010_08_(Protozoadb) 0

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 3

UniProt__viral_sequences_(Viral) 0

TargetDB__(Targets) 17

NCBI_viral_sequences_(Viral) 0

STRING_v9.0.5_(STRING) 70

Uniprot_2018_03_genome 1215

PDB_chains_(SCOP_1.75)_(PDB) 1

NCBI_2017_08_genome 14769

Protein_Data_Bank_(all_PDB_sequenc) 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

SEARCH

BROWSE

TOOLS

ABOUT

HELP

Domain combinations for 160800 superfamilies in groups of genomes