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  Home > SCOP hierarchy > Domain combination - 51332

Domain combinations for 51332 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51332 - E2 regulatory, transactivation domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Pongo_abelii_76_2   (Sumatran orangutan)   0
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Saccoglossus_kowalevskii_v3.0 0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Anolis_carolinensis_76_2.0   (Green anole)   0
Latimeria_chalumnae_76_1   (Coelacanth)   0
Danio_rerio_76_9   (Zebrafish)   0
Lottia_gigantea_   (Owl limpet)   0
Helobdella_robusta_ 0
Danaus_plexippus_OGS1.0   (Monarch butterfly)   0
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   0
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   0
Tribolium_castaneum_3.0   (Red flour beetle)   0
Acyrthosiphon_pisum_   (Pea aphid)   0
Daphnia_pulex_   (Common water flea)   0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   0
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Caenorhabditis_japonica_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Caenorhabditis_briggsae_2 0
Amphimedon_queenslandica 0
Trichoplax_adhaerens_ 0
Sphaeroforma_arctica_JP610_ 0
Mortierella_verticillata_NRRL_6337_ 0
Phycomyces_blakesleeanus_ 0
Rhizopus_oryzae_RA_99-880_ 0
Mucor_circinelloides_ 0
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 0
Sphaerobolus_stellatus_v1.0 0
Piloderma_croceum_F_1598_v1.0 0
Serpula_lacrymans_var._lacrymans_S7.9_ 0
Hydnomerulius_pinastri_v2.0 0
Paxillus_rubicundulus_Ve08.2h10_v1.0 0
Amanita_thiersii_Skay4041_v1.0 0
Amanita_muscaria_Koide_v1.0   (Fly agaric)   0
Hebeloma_cylindrosporum_h7_v2.0 0
Agaricus_bisporus_var._bisporus_ 0
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Neurospora_crassa_OR74A_ 0
Blumeria_graminis_22 0
Setosphaeria_turcica_v1.0 0
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Zasmidium_cellare_ATCC_36951_v1.0 0
Uncinocarpus_reesii_1704_ 0
Aspergillus_oryzae_RIB40_ 0
Aspergillus_flavus_NRRL3357_ 0
Tuber_melanosporum_Mel28_22 0
Tuber_melanosporum_Vittad_   (Perigord truffle)   0
Hansenula_polymorpha_v2.0 0
Candida_parapsilosis_ 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 0
Pichia_stipitis_CBS_6054_ 0
Debaromyces_hansenii 0
Pichia_pastoris_GS115_ 0
Candida_glabrata_CBS138 0
Ashbya_gossypii_ATCC_10895_ 0
Zygosaccharomyces_rouxii_ 0
Saccharomyces_mikatae_MIT 0
Saccharomyces_paradoxus_MIT 0
Saccharomyces_cerevisiae_76   (Baker's yeast)   0
Saccharomyces_bayanus_MIT 0
Catenaria_anguillulae_PL171_v1.0 0
Dictyostelium_purpureum_ 0
Entamoeba_invadens_1.2 0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 0
Thellungiella_halophila_v173 0
Arabidopsis_thaliana_10   (Thale cress)   0
Phaseolus_vulgaris_v186   (French bean)   0
Cucumis_sativus_v122   (Cucumber)   0
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   0
Populus_trichocarpa_v156   (Black cottonwood)   0
Actinidia_chinensis_Hongyang_ 0
Triticum_urartu_22 0
Triticum_aestivum_22   (Bread wheat)   0
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   0
Panicum_virgatum_v202   (Switchgrass)   0
Amborella_trichopoda_22 0
Physcomitrella_patens 0
Asterochloris_sp._Cgr/DA1pho_v1.0 0
Leishmania_major_strain_Friedlin_ 0
Leishmania_infantum_JPCM5_2.4 0
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 0
Trypanosoma_vivax_ 0
Pythium_iwayamai_DAOM_BR242034_22 0
Pythium_irregulare_DAOM_BR486_22 0
Phaeodactylum_tricornutumCCAP_1055/1 0
Thalassiosira_pseudonana_CCMP1335 0
Tetrahymena_thermophila_SB210_1_ 0
Cryptosporidium_muris 0
Theileria_annulata 0
Plasmodium_yoelii_ssp._yoelii_1_ 0
Gloeocapsa_sp._PCC_7428 0
Mycoplasma_hyopneumoniae_168 0
Streptomyces_avermitilis_MA-4680 0
Clostridium_clariflavum_DSM_19732 0
Ruminococcus_bromii 0
Dehalobacter_sp._DCA 0
Dehalobacter_sp._CF 0
Filifactor_alocis_ATCC_35896 0
[Ruminococcus]_torques 0
Heliobacterium_modesticaldum_Ice1 0
Caldicellulosiruptor_obsidiansis_OB47 0
Caldicellulosiruptor_hydrothermalis_108 0
Caldicellulosiruptor_owensensis_OL 0
Streptococcus_pneumoniae_P1031 0
Exiguobacterium_sp._AT1b 0
Paenibacillus_sp._JDR-2 0
Paenibacillus_mucilaginosus_3016 0
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 0
Halobacillus_halophilus_DSM_2266 0
Bacillus_pseudofirmus_OF4 0
Ignavibacterium_album_JCM_16511 0
Marivirga_tractuosa_DSM_4126 0
Bacteroides_vulgatus_ATCC_8482 0
Fluviicola_taffensis_DSM_16823 0
Owenweeksia_hongkongensis_DSM_17368 0
Cellulophaga_algicola_DSM_14237 0
Cellulophaga_lytica_DSM_7489 0
Chlamydophila_abortus_S26/3 0
Hydrogenobaculum_sp._SN 0
Hydrogenobaculum_sp._HO 0
Burkholderia_vietnamiensis_G4 0
Novosphingobium_sp._PP1Y 0
Polymorphum_gilvum_SL003B-26A1 0
Bradyrhizobium_sp._ORS_278 0
Alteromonas_sp._SN2 0
Candidatus_Nitrosopumilus_sp._AR2 0
Ignisphaera_aggregans_DSM_17230 0
Sulfolobus_islandicus_Y.N.15.51 0
Vulcanisaeta_distributa_DSM_14429 0
Archaeoglobus_profundus_DSM_5631 0
Thermococcus_kodakarensis_KOD1 0
Methanococcus_maripaludis_C5 0

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Strains
Genome     Number
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0
Saccharomyces_cerevisiae_UC5 0
Saccharomyces_cerevisiae_PW5 0
Saccharomyces_cerevisiae_CBS7960 0
Saccharomyces_cerevisiae_YJM269 0
Saccharomyces_cerevisiae_T7 0
Saccharomyces_cerevisiae_FostersB 0
Saccharomyces_cerevisiae_FostersO 0
Saccharomyces_cerevisiae_VL3 0
Saccharomyces_cerevisiae_Vin13 0
Saccharomyces_cerevisiae_LalvinQA23 0
Saccharomyces_cerevisiae_AWRI796 0
Saccharomyces_cerevisiae_Sigma1278b 0
Saccharomyces_cerevisiae_W303 0
Saccharomyces_cerevisiae_JAY291 0
Saccharomyces_cerevisiae_AWRI1631 0
Saccharomyces_cerevisiae_YPS163 0
Saccharomyces_cerevisiae_M22 0
Saccharomyces_cerevisiae_CLIB215 0
Saccharomyces_cerevisiae_YJM789_ 0
Saccharomyces_cerevisiae_YJM789 0
Saccharomyces_cerevisiae_RM11-1a 0
Saccharomyces_cerevisiae_RM11-1a_ 0
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Chamaesiphon_minutus_PCC_6605 0
Spiroplasma_taiwanense_CT-1 0
Mycoplasma_hyopneumoniae_168-L 0
Mycoplasma_hyopneumoniae_J 0
Streptomyces_davawensis_JCM_4913 0
Clostridium_botulinum_BKT015925 0
Thermacetogenium_phaeum_DSM_12270 0
Streptococcus_pneumoniae_ST556 0
Streptococcus_pneumoniae_SPN034156 0
Streptococcus_pneumoniae_INV104 0
Streptococcus_pneumoniae_INV200 0
Streptococcus_pneumoniae_gamPNI0373 0
Streptococcus_pneumoniae_AP200 0
Streptococcus_pneumoniae_ATCC_700669 0
Streptococcus_pneumoniae_TCH8431/19A 0
Streptococcus_pneumoniae_CGSP14 0
Streptococcus_pneumoniae_G54 0
Streptococcus_pneumoniae_JJA 0
Streptococcus_pneumoniae_70585 0
Streptococcus_pneumoniae_Hungary19A-6 0
Streptococcus_pneumoniae_Taiwan19F-14 0
Streptococcus_pneumoniae_D39 0
Streptococcus_pneumoniae_670-6B 0
Streptococcus_pneumoniae_R6 0
Streptococcus_pneumoniae_TIGR4 0
Streptococcus_mutans_LJ23 0
Paenibacillus_mucilaginosus_K02 0
Listeria_monocytogenes_EGD_sequence 0
Listeria_monocytogenes_J1-220 0
Listeria_monocytogenes_SLCC5850 0
Listeria_monocytogenes_ATCC_19117 0
Listeria_monocytogenes_L312 0
Listeria_monocytogenes_SLCC2479 0
Listeria_monocytogenes_SLCC7179 0
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 0
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 0
Listeria_monocytogenes_serotype_7_str._SLCC2482 0
Listeria_monocytogenes_08-5578 0
Listeria_monocytogenes_08-5923 0
Listeria_monocytogenes_10403S 0
Listeria_monocytogenes_J0161 0
Listeria_monocytogenes_FSL_R2-561 0
Listeria_monocytogenes_EGD-e 0
Amphibacillus_xylanus_NBRC_15112 0
Prevotella_sp._oral_taxon_299_str._F0039 0
Helicobacter_cetorum_MIT_99-5656 0
Bradyrhizobium_sp._BTAi1 0
Simiduia_agarivorans_SA1_=_DSM_21679 0
Alteromonas_macleodii_str._'Ionian_Sea_U8' 0
Alteromonas_macleodii_str._'Ionian_Sea_U7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U4' 0
Xanthomonas_campestris_pv._vesicatoria_str._85-10 0
Serratia_marcescens_FGI94 0
Sulfolobus_islandicus_LAL14/1 0
Sulfolobus_islandicus_HVE10/4 0
Sulfolobus_islandicus_Y.G.57.14 0
Sulfolobus_islandicus_L.S.2.15 0
Sulfolobus_islandicus_M.16.27 0
Sulfolobus_islandicus_M.14.25 0
Sulfolobus_islandicus_M.16.4 0
Sulfolobus_islandicus_L.D.8.5 0
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 0

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Longest transcript per gene
Genome     Number
Pongo_abelii_69_2   (Sumatran orangutan)   0
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Anolis_carolinensis_69_2.0   (Green anole)   0
Latimeria_chalumnae_69_1   (Coelacanth)   0
Danio_rerio_69_9   (Zebrafish)   0
Caenorhabditis_elegans_69_215   (Roundworm)   0
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   0
Arabidopsis_thaliana_10   (Thale cress)   0

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Homo_sapiens__(NCBI_version)   (Human)   0
Moniliophthora_perniciosa_FA553__(Genome_survey) 0
Lotus_japonicus__(Early_assembly) 0
Malus_x_domestica_(Duplicate)   (Apple)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
NCBI_plasmid_sequences_(Plasmids) 0
NCBI_viral_sequences_(Viral) 0
NCBI_2017_08_genome 5
UniProt__viral_sequences_(Viral) 9
Uniprot_2018_03_genome 26
Protozoadb_2010_08_(Protozoadb) 0
STRING_v9.0.5_(STRING) 0
TargetDB__(Targets) 0
PDB_chains_(SCOP_1.75)_(PDB) 6
Protein_Data_Bank_(all_PDB_sequenc) 13
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 57

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.