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  Home > SCOP hierarchy > Domain combination - 52777,56801,47336,52777,52777,56801,47336,53474

Domain combinations for 52777,56801,47336,52777,52777,56801,47336,53474 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52777 - CoA-dependent acyltransferases
56801 - Acetyl-CoA synthetase-like
47336 - ACP-like
52777 - CoA-dependent acyltransferases
52777 - CoA-dependent acyltransferases
56801 - Acetyl-CoA synthetase-like
47336 - ACP-like
53474 - alpha/beta-Hydrolases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Mortierella_verticillata_NRRL_6337_ 0
Aspergillus_oryzae_RIB40_ 0
Spizellomyces_punctatus_DAOM_BR117_ 0
Synechococcus_sp._PCC_7502 0
'Nostoc_azollae'_0708 0
Nostoc_punctiforme_PCC_73102 0
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 0
Kitasatospora_setae_KM-6054 0
Streptomyces_coelicolor_A3(2) 0
Streptomyces_sp._PAMC26508 0
Streptomyces_flavogriseus_ATCC_33331 0
Streptomyces_sp._SirexAA-E 0
Streptomyces_griseus_subsp._griseus_NBRC_13350 0
Streptomyces_bingchenggensis_BCW-1 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Actinosynnema_mirum_DSM_43827 0
Saccharomonospora_viridis_DSM_43017 0
Pseudonocardia_dioxanivorans_CB1190 0
Saccharopolyspora_erythraea_NRRL_2338 0
Amycolatopsis_mediterranei_U32 0
Salinispora_arenicola_CNS-205 0
Verrucosispora_maris_AB-18-032 0
Actinoplanes_sp._N902-109 0
Actinoplanes_sp._SE50/110 0
Tsukamurella_paurometabola_DSM_20162 0
Gordonia_sp._KTR9 0
Gordonia_polyisoprenivorans_VH2 0
Gordonia_bronchialis_DSM_43247 0
Rhodococcus_jostii_RHA1 0
Rhodococcus_equi_103S 0
Rhodococcus_opacus_B4 0
Rhodococcus_erythropolis_PR4 0
Nocardia_cyriacigeorgica_GUH-2 0
Nocardia_farcinica_IFM_10152 0
Amycolicicoccus_subflavus_DQS3-9A1 0
Mycobacterium_intracellulare_ATCC_13950 0
Mycobacterium_rhodesiae_NBB3 0
Mycobacterium_marinum_M 0
Mycobacterium_smegmatis_str._MC2_155 0
Sanguibacter_keddieii_DSM_10542 0
Arthrobacter_chlorophenolicus_A6 0
Arthrobacter_sp._FB24 0
Herpetosiphon_aurantiacus_DSM_785 0
Desulfosporosinus_orientis_DSM_765 0
Clostridium_cellulovorans_743B 0
Brevibacillus_brevis_NBRC_100599 0
Paenibacillus_mucilaginosus_3016 0
Solibacillus_silvestris_StLB046 0
Oceanobacillus_iheyensis_HTE831 0
Bacillus_sp._JS 0
Bacillus_amyloliquefaciens_FZB42 0
Bacillus_atrophaeus_1942 0
Bacillus_subtilis_subsp._subtilis_str._168 0
Bacillus_licheniformis_DSM_13_=_ATCC_14580 0
Bacillus_weihenstephanensis_KBAB4 0
Bacillus_thuringiensis_str._Al_Hakam 0
Bacillus_cereus_03BB102 0
Bacillus_anthracis_str._A0248 0
Chitinophaga_pinensis_DSM_2588 0
Parachlamydia_acanthamoebae_UV-7 0
Granulicella_mallensis_MP5ACTX8 0
Candidatus_Nitrospira_defluvii 0
Haliangium_ochraceum_DSM_14365 0
Stigmatella_aurantiaca_DW4/3-1 0
Corallococcus_coralloides_DSM_2259 0
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 0
Chromobacterium_violaceum_ATCC_12472 0
Burkholderia_rhizoxinica_HKI_454 0
Cupriavidus_taiwanensis_LMG_19424 0
Ralstonia_solanacearum_CFBP2957 0
Burkholderia_pseudomallei_1106a 0
Burkholderia_gladioli_BSR3 0
Burkholderia_glumae_BGR1 0
Delftia_sp._Cs1-4 0
Collimonas_fungivorans_Ter331 0
Herbaspirillum_seropedicae_SmR1 0
Achromobacter_xylosoxidans_A8 0
Nitrosospira_multiformis_ATCC_25196 0
Gluconacetobacter_diazotrophicus_PAl_5 0
Sinorhizobium_medicae_WSM419 0
Bradyrhizobium_japonicum_USDA_110 0
Methylocystis_sp._SC2 0
Shewanella_denitrificans_OS217 0
Xanthomonas_albilineans_GPE_PC73 0
gamma_proteobacterium_HdN1 0
Photorhabdus_asymbiotica 0
Photorhabdus_luminescens_subsp._laumondii_TTO1 0
Xenorhabdus_bovienii_SS-2004 0
Xenorhabdus_nematophila_ATCC_19061 0
Serratia_sp._AS12 0
Serratia_sp._ATCC_39006 0
Serratia_plymuthica_AS9 0
Pectobacterium_atrosepticum_SCRI1043 0
Erwinia_tasmaniensis_Et1/99 0
Erwinia_sp._Ejp617 0
Erwinia_pyrifoliae_Ep1/96 0
Erwinia_amylovora_ATCC_49946 0
Pseudomonas_sp._TKP 0
Pseudomonas_sp._UW4 0
Pseudomonas_entomophila_L48 0
Pseudomonas_syringae_pv._tomato_str._DC3000 0
Pseudomonas_protegens_Pf-5 0
Pseudomonas_fluorescens_SBW25 0
Pseudomonas_aeruginosa_UCBPP-PA14 0
Pseudomonas_sp._VLB120 0
Acinetobacter_oleivorans_DR1 0

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Strains
Genome     Number
Cylindrospermum_stagnale_PCC_7417 0
Frankia_sp._CcI3 0
Nocardiopsis_alba_ATCC_BAA-2165 0
Streptomyces_albus_J1074 0
Streptomyces_rapamycinicus_NRRL_5491 0
Streptomyces_fulvissimus_DSM_40593 0
Streptomyces_venezuelae_ATCC_10712 0
Streptomyces_collinus_Tu_365 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0
Saccharothrix_espanaensis_DSM_44229 0
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_orientalis_HCCB10007 0
Actinoplanes_friuliensis_DSM_7358 0
Rhodococcus_pyridinivorans_SB3094 0
Rhodococcus_erythropolis_CCM2595 0
Nocardia_brasiliensis_ATCC_700358 0
Mycobacterium_sp._MOTT36Y 0
Mycobacterium_intracellulare_MOTT-64 0
Mycobacterium_indicus_pranii_MTCC_9506 0
Mycobacterium_intracellulare_MOTT-02 0
Mycobacterium_avium_subsp._paratuberculosis_MAP4 0
Mycobacterium_avium_subsp._paratuberculosis_K-10 0
Mycobacterium_smegmatis_str._MC2_155 0
Paenibacillus_sp._Y412MC10 0
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 0
Paenibacillus_larvae_subsp._larvae_DSM_25430 0
Paenibacillus_polymyxa_CR1 0
Geobacillus_sp._Y4.1MC1 0
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 0
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 0
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 0
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 0
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 0
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 0
Bacillus_amyloliquefaciens_LFB112 0
Bacillus_amyloliquefaciens_CC178 0
Bacillus_amyloliquefaciens_Y2 0
Bacillus_amyloliquefaciens_IT-45 0
Bacillus_amyloliquefaciens_XH7 0
Bacillus_amyloliquefaciens_LL3 0
Bacillus_amyloliquefaciens_TA208 0
Bacillus_amyloliquefaciens_DSM_7 0
Bacillus_licheniformis_9945A 0
Bacillus_subtilis_PY79 0
Bacillus_subtilis_XF-1 0
Bacillus_subtilis_QB928 0
Bacillus_subtilis_BSn5 0
Bacillus_subtilis_subsp._subtilis_str._BAB-1 0
Bacillus_subtilis_subsp._subtilis_str._BSP1 0
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 0
Bacillus_subtilis_subsp._subtilis_6051-HGW 0
Bacillus_subtilis_subsp._spizizenii_TU-B-10 0
Bacillus_subtilis_subsp._spizizenii_str._W23 0
Bacillus_subtilis_subsp._natto_BEST195 0
Bacillus_licheniformis_DSM_13_=_ATCC_14580 0
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 0
Bacillus_toyonensis_BCT-7112 0
Bacillus_thuringiensis_HD-771 0
Bacillus_thuringiensis_HD-789 0
Bacillus_thuringiensis_MC28 0
Bacillus_thuringiensis_serovar_chinensis_CT-43 0
Bacillus_thuringiensis_YBT-1518 0
Bacillus_thuringiensis_Bt407 0
Bacillus_thuringiensis_serovar_konkukian_str._97-27 0
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 0
Bacillus_thuringiensis_BMB171 0
Bacillus_thuringiensis_serovar_finitimus_YBT-020 0
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1
Bacillus_cereus_FRI-35 0
Bacillus_cereus_biovar_anthracis_str._CI 0
Bacillus_cereus_AH820 0
Bacillus_cereus_AH187 0
Bacillus_cereus_B4264 0
Bacillus_cereus_G9842 0
Bacillus_cereus_Q1 0
Bacillus_cereus_F837/76 0
Bacillus_cereus_NC7401 0
Bacillus_cereus_E33L 0
Bacillus_cereus_ATCC_10987 0
Bacillus_anthracis_str._H9401 0
Bacillus_anthracis_str._CDC_684 0
Bacillus_anthracis_str._'Ames_Ancestor' 0
Bacillus_anthracis_str._Sterne 0
Bacillus_anthracis_str._Ames 0
Sorangium_cellulosum_So0157-2 0
Myxococcus_stipitatus_DSM_14675 0
Ralstonia_solanacearum_FQY_4 0
Ralstonia_solanacearum_PSI07 0
Ralstonia_solanacearum_CMR15 0
Ralstonia_solanacearum_GMI1000 0
Burkholderia_sp._YI23 0
Burkholderia_thailandensis_MSMB121 0
Burkholderia_pseudomallei_MSHR305 0
Burkholderia_pseudomallei_NCTC_13179 0
Burkholderia_pseudomallei_BPC006 0
Burkholderia_pseudomallei_1026b 0
Burkholderia_pseudomallei_668 0
Burkholderia_pseudomallei_1710b 0
Burkholderia_pseudomallei_K96243 0
Burkholderia_mallei_NCTC_10229 0
Burkholderia_mallei_ATCC_23344 0
Variovorax_paradoxus_EPS 0
Gluconacetobacter_diazotrophicus_PAl_5 0
Bradyrhizobium_sp._BTAi1 0
Bradyrhizobium_oligotrophicum_S58 0
Bradyrhizobium_japonicum_USDA_6 0
Xanthomonas_oryzae_pv._oryzicola_BLS256 0
Serratia_sp._AS13 0
Serratia_plymuthica_S13 0
Dickeya_dadantii_Ech586 0
Dickeya_dadantii_3937 0
Erwinia_pyrifoliae_DSM_12163 0
Erwinia_amylovora_CFBP1430 0
Pseudomonas_syringae_pv._syringae_B728a 0
Pseudomonas_putida_BIRD-1 0
Pseudomonas_putida_KT2440 0
Pseudomonas_putida_GB-1 0
Pseudomonas_protegens_CHA0 0
Pseudomonas_poae_RE*1-1-14 0
Pseudomonas_fluorescens_A506 0
Pseudomonas_fluorescens_R124 0
Pseudomonas_fluorescens_Pf0-1 0
Pseudomonas_resinovorans_NBRC_106553 0
Pseudomonas_aeruginosa_SCV20265 0
Pseudomonas_aeruginosa_MTB-1 0
Pseudomonas_aeruginosa_LES431 0
Pseudomonas_aeruginosa_RP73 0
Pseudomonas_aeruginosa_B136-33 0
Pseudomonas_aeruginosa_PA1R 0
Pseudomonas_aeruginosa_PA1 0
Pseudomonas_aeruginosa_DK2 0
Pseudomonas_aeruginosa_NCGM2.S1 0
Pseudomonas_aeruginosa_M18 0
Pseudomonas_aeruginosa_LESB58 0
Pseudomonas_aeruginosa_PA7 0
Pseudomonas_aeruginosa_PAO1 0
Acinetobacter_genomosp._13TU__RUH2624 0
Acinetobacter_calcoaceticus_ruh2202 0

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Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 1
STRING_v9.0.5_(STRING) 0
Uniprot_2018_03_genome 2697
NCBI_2017_08_genome 159
TargetDB__(Targets) 0

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.