SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > SCOP hierarchy > Domain combination - 57027

Domain combinations for 57027 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57027 - Plant inhibitors of proteinases and amylases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Pongo_abelii_76_2   (Sumatran orangutan)   0
Ovis_aries_76_3.1   (Sheep)   0
Oikopleura_dioica 0
Ciona_intestinalis_76   (Vase tunicate)   0
Crassostrea_gigas_22   (Pacific oyster)   0
Capitella_sp._I_ 0
Heliconius_melpomene_   (Postman butterfly)   0
Drosophila_suzukii 0
Acyrthosiphon_pisum_   (Pea aphid)   0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Pristionchus_pacificus_ 0
Caenorhabditis_briggsae_2 0
Acropora_digitifera_v1.0 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   0
Hydra_vulgaris 0
Galerina_marginata_v1.0 0
Punctularia_strigosozonata_v1.0 0
Apiospora_montagnei_NRRL_25634_v1.0 0
Cochliobolus_lunatus_m118_v2.0 0
Coccidioides_immitis_RS_ 0
Trichophyton_equinum_CBS_127.97_ 0
Aspergillus_sydowii_v1.0 0
Aspergillus_versicolor_v1.0 0
Aspergillus_wentii_v1.0 0
Selaginella_moellendorffii_ 0
Eucalyptus_grandis_v201   (Rose gum)   0
Citrus_clementina_v165 0
Citrus_sinensis_v154   (Sweet orange)   0
Capsella_rubella_v183 0
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Arabidopsis_thaliana_10   (Thale cress)   0
Medicago_truncatula_   (Barrel medic)   0
Cucumis_sativus_v122   (Cucumber)   0
Mimulus_guttatus_v140   (Spotted monkey flower)   0
Solanum_lycopersicum_v.2.3   (Tomato)   0
Solanum_tuberosum_   (Potato)   1
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_nivara_22 0
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   0
Trypanosoma_cruzi_strain_CL_Brener 0
Fragilariopsis_cylindrus 0
Perkinsus_marinus_ATCC_50983_ 0
Rhodopirellula_baltica_SH_1 0
Haliangium_ochraceum_DSM_14365 0
Azoarcus_sp._KH32C 0
Metallosphaera_sedula_DSM_5348 0
Sulfolobus_tokodaii_str._7 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number
Coccidioides_posadasii_str._Silveira_ 0
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Myxococcus_stipitatus_DSM_14675 0
Burkholderia_pseudomallei_BPC006 0
Sulfolobus_islandicus_M.16.27 0

Longest transcript per gene
Genome     Number
Pongo_abelii_69_2   (Sumatran orangutan)   0
Ciona_intestinalis_69   (Vase tunicate)   0
Arabidopsis_thaliana_10   (Thale cress)   0

Others
Genome     Number
Moniliophthora_perniciosa_FA553__(Genome_survey) 0
Lotus_japonicus__(Early_assembly) 0
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   0
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   0
Protein_Data_Bank_(all_PDB_sequenc) 48
TargetDB__(Targets) 0
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 92
Uniprot_2018_03_genome 40
UniProt__viral_sequences_(Viral) 0
NCBI_viral_sequences_(Viral) 0
Protozoadb_2010_08_(Protozoadb) 0
PDB_chains_(SCOP_1.75)_(PDB) 17
STRING_v9.0.5_(STRING) 0
NCBI_2017_08_genome 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.