SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 63724 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

63724 - Cytolysin/lectin

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Mus_musculus_76_38   (House mouse)   0
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Oryctolagus_cuniculus_76_2   (Rabbit)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   0
Erinaceus_europaeus_76   (Western European hedgehog)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Ornithorhynchus_anatinus_76_5   (Platypus)   1
Saccoglossus_kowalevskii_v3.0 0
Gallus_gallus_76_4   (Chicken)   1
Anas_platyrhynchos_76_1.0   (Mallard)   1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   0
Xenopus_laevis_   (African clawed frog)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_76_1   (Coelacanth)   1
Lepisosteus_oculatus_76   (Spotted gar)   0
Gadus_morhua_76_1   (Atlantic cod)   6
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   4
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   3
Oryzias_latipes_76_1   (Japanese medaka)   6
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   4
Poecilia_formosa_76   (Amazon molly)   6
Oreochromis_niloticus_76_1.0   (Nile tilapia)   5
Astyanax_mexicanus_76   (Mexican tetra)   5
Danio_rerio_76_9   (Zebrafish)   1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   0
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   0
Crassostrea_gigas_22   (Pacific oyster)   0
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   0
Megaselia_scalaris_22 0
Strigamia_maritima_22 0
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Meloidogyne_hapla_ 0
Caenorhabditis_brenneri_ 0
Trichinella_spiralis_22 0
Acropora_digitifera_v1.0 1
Nematostella_vectensis_1.0   (Starlet sea anemone)   0
Hydra_vulgaris 2
Amphimedon_queenslandica 0
Mortierella_verticillata_NRRL_6337_ 0
Rhizomucor_miehei_CAU432_ 0
Mixia_osmundae_IAM_14324_v1.0 0
Microbotryum_violaceum_22 0
Sphaerobolus_stellatus_v1.0 4
Coniophora_puteana 0
Hydnomerulius_pinastri_v2.0 0
Paxillus_rubicundulus_Ve08.2h10_v1.0 3
Pisolithus_tinctorius_Marx_270_v1.0 0
Pleurotus_ostreatus_   (Oyster mushroom)   2
Galerina_marginata_v1.0 1
Hebeloma_cylindrosporum_h7_v2.0 2
Laccaria_bicolor_S238N-H82_ 1
Agaricus_bisporus_var._bisporus_ 3
Stereum_hirsutum_FP-91666_SS1__v1.0 1
Punctularia_strigosozonata_v1.0 3
Sebacina_vermifera_MAFF_305830_v1.0 0
Postia_placenta_ 4
Wolfiporia_cocos_MD-104_SS10__v1.0 1
Fomitopsis_pinicolav1.0 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Phanerochaete_chrysosporium_RP-78_2.1 1
Apiospora_montagnei_NRRL_25634_v1.0 0
Podospora_anserina_ 1
Thielavia_terrestris_NRRL_8126_ 0
Neurospora_discreta_FGSC_8579_ 1
Neurospora_crassa_OR74A_ 1
Fusarium_graminearum_ 1
Nectria_haematococca_mpVI_ 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1
Fusarium_verticillioides_7600_ 1
Trichoderma_citrinoviride_v1.0 1
Trichoderma_virens_Gv29-8_ 0
Sclerotinia_sclerotiorum_ 0
Setosphaeria_turcica_v1.0 0
Pyrenophora_tritici-repentis_ 0
Mycosphaerella_graminicola_IPO323_ 0
Zasmidium_cellare_ATCC_36951_v1.0 0
Septoria_musiva_v1.0 0
Mycosphaerella_fijiensis_CIRAD86_ 0
Coccidioides_posadasii_RMSCC_3488_ 0
Coccidioides_immitis_RS_ 1
Aspergillus_zonatus_v1.0 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 1
Penicillium_chrysogenum_v1.0 1
Aspergillus_fumigatus_Af293 1
Aspergillus_brasiliensis_v1.0 1
Neosartorya_fischeri_NRRL_181_ 1
Aspergillus_terreus_NIH2624_ 1
Aspergillus_tubingensis_v1.0 1
Aspergillus_wentii_v1.0 1
Aspergillus_niger_22 1
Dekkera_bruxellensis_CBS_2499_v2.0 0
Schizosaccharomyces_cryophilus_OY26_22 0
Schizosaccharomyces_octosporus_yFS286_ 0
Catenaria_anguillulae_PL171_v1.0 0
Allomyces_macrogynus_ATCC_38327_ 0
Spizellomyces_punctatus_DAOM_BR117_ 0
Dictyostelium_discoideum 0
Entamoeba_invadens_1.2 0
Entamoeba_histolytica_1 0
Selaginella_moellendorffii_ 3
Eucalyptus_grandis_v201   (Rose gum)   0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 0
Glycine_max_v109   (Soybean)   0
Cucumis_sativus_v122   (Cucumber)   0
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   0
Vitis_vinifera_   (Wine grape)   0
Solanum_lycopersicum_v.2.3   (Tomato)   0
Solanum_tuberosum_   (Potato)   0
Actinidia_chinensis_Hongyang_ 0
Triticum_urartu_22 0
Triticum_aestivum_22   (Bread wheat)   0
Aegilops_tauschii_22 0
Oryza_brachyantha_22   (Malo sina)   0
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   0
Sorghum_bicolor_   (Sorghum)   0
Musa_acuminata_22   (Wild Malaysian banana)   0
Physcomitrella_patens 2
Asterochloris_sp._Cgr/DA1pho_v1.0 0
Chlorella_variabilis_sp._NC64A_ 0
Micromonas_pusilla_CCMP1545_v3.0 0
Trypanosoma_vivax_ 0
Pythium_arrhenomanes_ATCC_12531_22 0
Pythium_irregulare_DAOM_BR486_22 0
Hyaloperonospora_arabidopsidis_22 0
Paramecium_tetraurelia_ 0
Symbiodinium_minutum_clade_B1_v1.2 0
Naegleria_gruberi_ 0
Guillardia_theta_CCMP2712_v1.0_ 0
Nostoc_sp._PCC_7107 0
Anabaena_sp._90 0
Stackebrandtia_nassauensis_DSM_44728 0
Streptomyces_bingchenggensis_BCW-1 0
Mycobacterium_ulcerans_Agy99 0
Mycobacterium_marinum_M 0
Beutenbergia_cavernae_DSM_12333 0
Oceanithermus_profundus_DSM_14977 0
Streptococcus_sanguinis_SK36 0
Paenibacillus_mucilaginosus_3016 0
Geobacillus_thermoleovorans_CCB_US3_UF5 0
Geobacillus_kaustophilus_HTA426 0
Geobacillus_sp._GHH01 0
Geobacillus_sp._WCH70 0
Geobacillus_thermodenitrificans_NG80-2 0
Ignavibacterium_album_JCM_16511 0
Runella_slithyformis_DSM_19594 0
Odoribacter_splanchnicus_DSM_20712 0
Pedobacter_saltans_DSM_12145 0
Gramella_forsetii_KT0803 0
Akkermansia_muciniphila_ATCC_BAA-835 0
Turneriella_parva_DSM_21527 0
Treponema_brennaborense_DSM_12168 0
Treponema_denticola_ATCC_35405 0
Marinitoga_piezophila_KA3 0
Elusimicrobium_minutum_Pei191 0
Sebaldella_termitidis_ATCC_33386 0
Campylobacter_fetus_subsp._fetus_82-40 0
Helicobacter_bizzozeronii_CIII-1 0
Desulfovibrio_alaskensis_G20 0
Thiomonas_arsenitoxydans 0
Thiomonas_intermedia_K12 0
Burkholderia_glumae_BGR1 0
Pseudovibrio_sp._FO-BEG1 0
Ochrobactrum_anthropi_ATCC_49188 0
Rhizobium_leguminosarum_bv._viciae_3841 0
Agrobacterium_vitis_S4 0
Mesorhizobium_loti_MAFF303099 0
Bartonella_henselae_str._Houston-1 0
Haemophilus_parainfluenzae_T3T1 0
Colwellia_psychrerythraea_34H 0
Serratia_proteamaculans_568 0
Halyomorpha_halys_symbiont 0
Wigglesworthia_glossinidia_endosymbiont_of_Glossina_brevipalpis 0
Francisella_tularensis_subsp._tularensis_WY96-3418 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Coccidioides_posadasii_str._Silveira_ 0
Coccidioides_immitis_RMSCC_3703_ 0
Coccidioides_immitis_RMSCC_2394_ 1
Coccidioides_immitis_H538.4_ 1
Aspergillus_fumigatus_A1163_ 1
Saccharomyces_cerevisiae_AWRI1631 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Plasmodium_falciparum_Dd2_ 0
Cylindrospermum_stagnale_PCC_7417 0
Streptomyces_rapamycinicus_NRRL_5491 0
Mycobacterium_liflandii_128FXT 0
[Eubacterium]_cylindroides_[Eubacterium]_cylindroides_T2-87 0
Clostridium_sp._SY8519 0
Enterococcus_mundtii_QU_25 0
Enterococcus_faecalis_V583 0
Lactobacillus_amylovorus_GRL_1112 0
Geobacillus_sp._C56-T3 0
Geobacillus_sp._Y412MC52 0
Geobacillus_sp._Y412MC61 0
Bacillus_thuringiensis_serovar_chinensis_CT-43 0
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 0
Treponema_pedis_str._T_A4 0
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 0
Campylobacter_jejuni_RM1221 0
Campylobacter_jejuni_subsp._jejuni_00-2544 0
Campylobacter_jejuni_subsp._jejuni_00-2538 0
Campylobacter_jejuni_subsp._jejuni_00-2426 0
Campylobacter_jejuni_subsp._jejuni_00-2425 0
Campylobacter_jejuni_subsp._jejuni_PT14 0
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 0
Campylobacter_jejuni_subsp._jejuni_S3 0
Campylobacter_jejuni_subsp._jejuni_IA3902 0
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 0
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 0
Neisseria_meningitidis_M01-240355 0
Rhizobium_leguminosarum_bv._trifolii_WSM2304 0
Rhizobium_leguminosarum_bv._trifolii_WSM1325 0
Bartonella_australis_Aust/NH1 0
Bibersteinia_trehalosi_USDA-ARS-USMARC-192 0
Stenotrophomonas_maltophilia_D457 0
Dickeya_dadantii_3937 0
Wigglesworthia_glossinidia_endosymbiont_of_Glossina_morsitans_morsitans_(Yale_colony) 0
Acinetobacter_genomosp._13TU__RUH2624 0
Acinetobacter_baumannii_ZW85-1 0
Acinetobacter_baumannii_TYTH-1 0
Acinetobacter_baumannii_BJAB0868 0
Acinetobacter_baumannii_BJAB07104 0
Acinetobacter_baumannii_TCDC-AB0715 0
Acinetobacter_baumannii_D1279779 0
Acinetobacter_baumannii_MDR-TJ 0
Acinetobacter_baumannii_1656-2 0
Acinetobacter_baumannii__ATCC_19606 0
Acinetobacter_baumannii_AB307-0294 0
Acinetobacter_baumannii_AYE 0
Acinetobacter_baumannii_MDR-ZJ06 0
Acinetobacter_baumannii_AB0057 0
Acinetobacter_baumannii_ACICU 0
Acinetobacter_junii__SH205 0
Francisella_tularensis_subsp._holarctica_F92 0
Francisella_tularensis_subsp._holarctica_LVS 0
Francisella_tularensis_subsp._tularensis_TIGB03 0
Francisella_tularensis_subsp._tularensis_TI0902 0
Francisella_tularensis_subsp._tularensis_NE061598 0
Francisella_tularensis_subsp._tularensis_FSC198 0
Francisella_tularensis_subsp._tularensis_SCHU_S4 0

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Longest transcript per gene
Genome     Number
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Sorex_araneus_69_1   (European shrew)   0
Erinaceus_europaeus_69   (Western European hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Ornithorhynchus_anatinus_69_5   (Platypus)   1
Gallus_gallus_69_2   (Chicken)   2
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_69_1   (Coelacanth)   1
Gadus_morhua_69_1   (Atlantic cod)   6
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   4
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   3
Oryzias_latipes_69_1   (Japanese medaka)   5
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   4
Oreochromis_niloticus_69_1.0   (Nile tilapia)   5
Danio_rerio_69_9   (Zebrafish)   1
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
Malus_x_domestica_(Duplicate)   (Apple)   0
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   0
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   0
NCBI_plasmid_sequences_(Plasmids) 0
PDB_chains_(SCOP_1.75)_(PDB) 6
TargetDB__(Targets) 0
Protozoadb_2010_08_(Protozoadb) 0
STRING_v9.0.5_(STRING) 33
Protein_Data_Bank_(all_PDB_sequenc) 125
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 273
NCBI_2017_08_genome 381
Uniprot_2018_03_genome 389
UniProt__viral_sequences_(Viral) 0
NCBI_viral_sequences_(Viral) 0

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