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Domain combinations for 81606,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

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Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 0

Pan_troglodytes_69_2.1.4 (Chimpanzee) 1

Gorilla_gorilla_69_3.1 (Western gorilla) 0

Pongo_abelii_69_2 (Sumatran orangutan) 0

Nomascus_leucogenys_69_1.0 (Northern white-cheeked gibbon) 0

Macaca_mulatta_69_1 (Rhesus monkey) 2

Callithrix_jacchus_69_3.2.1 (White-tufted-ear marmoset) 0

Otolemur_garnettii_69_3 (Small-eared galago) 0

Microcebus_murinus_69_1 (Gray mouse lemur) 4

Rattus_norvegicus_69_3.4 (Norway rat) 1

Mus_musculus_69_38 (House mouse) 0

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 0

Ictidomys_tridecemlineatus_69_2 (Thirteen-lined ground squirrel) 0

Cavia_porcellus_69_3 (Domestic guinea pig) 1

Oryctolagus_cuniculus_69_2 (Rabbit) 0

Ochotona_princeps_69 (American pika) 2

Tupaia_belangeri_69 (Northern tree shrew) 0

Sus_scrofa_69_10.2 (Pig) 2

Bos_taurus_69_3.1 (Cattle) 1

Vicugna_pacos_69_1 (Alpaca) 2

Tursiops_truncatus_69_1 (Bottlenose dolphin) 4

Mustela_putorius_furo_69_1.0 (Domestic ferret) 1

Ailuropoda_melanoleuca_69_1 (Giant panda) 1

Canis_familiaris_69_3.1 (Dog) 0

Felis_catus_69 (Domestic cat) 2

Equus_caballus_69_2 (Horse) 2

Myotis_lucifugus_69_2.0 (Little brown bat) 0

Pteropus_vampyrus_69_1 (Large flying fox) 1

Sorex_araneus_69_1 (European shrew) 1

Erinaceus_europaeus_69 (Western European hedgehog) 2

Procavia_capensis_69_1 (Cape rock hyrax) 1

Loxodonta_africana_69_3 (African savanna elephant) 1

Echinops_telfairi_69 (Small Madagascar hedgehog) 3

Dasypus_novemcinctus_69_2 (Nine-banded armadillo) 3

Choloepus_hoffmanni_69_1 (Hoffmann's two-fingered sloth) 0

Macropus_eugenii_69_1.0 (Tammar wallaby) 4

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 1

Monodelphis_domestica_69_5 (Gray short-tailed opossum) 1

Ornithorhynchus_anatinus_69_5 (Platypus) 2

Petromyzon_marinus_69_7.0 (Sea lamprey) 2

Meleagris_gallopavo_69_2 (Turkey) 2

Gallus_gallus_69_2 (Chicken) 1

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 3

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 2

Anolis_carolinensis_69_2.0 (Green anole) 4

Xenopus_tropicalis_69_4.2 (Tropical clawed frog) 2

Latimeria_chalumnae_69_1 (Coelacanth) 2

Gadus_morhua_69_1 (Atlantic cod) 0

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 0

Takifugu_rubripes_69_4 (Torafugu) 0

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 1

Oryzias_latipes_69_1 (Japanese medaka) 2

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 1

Oreochromis_niloticus_69_1.0 (Nile tilapia) 0

Danio_rerio_69_9 (Zebrafish) 1

Ciona_savignyi_69_2.0 (Pacific transparent sea squirt) 2

Ciona_intestinalis_69 (Vase tunicate) 2

Drosophila_melanogaster_69_5 (Fruit fly) 2

Caenorhabditis_elegans_69_215 (Roundworm) 3

Saccharomyces_cerevisiae_69_4 (Baker's yeast) 2

Arabidopsis_thaliana_10 (Thale cress) 14

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Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 9

Homo_sapiens__(NCBI_version) (Human) 1

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 0

Heliconius_numata__(Incomplete) 1

Loa_loa_v3.3_(Request) (Eye worm) 5

Wuchereria_bancrofti_v1.0_(Request) (Agent of lymphatic filariasis) 2

Brugia_malayi_v1.0_(Duplicate) (Agent of lymphatic filariasis) 2

Moniliophthora_perniciosa_FA553__(Genome_survey) 3

Lotus_japonicus__(Early_assembly) 16

Malus_x_domestica_(Duplicate) (Apple) 32

Ricinus_communis__(Early_assembly) (Castor bean) 11

Nicotiana_benthamiana_0.4.4_(Early_draft) 33

Solanum_pimpinellifolium_A-1.0_(Early_draft) (Currant tomato) 26

Solanum_lycopersicum_v2.3_(Early_assembly) (Tomato) 26

Phoenix_dactylifera__(Early_draft) (Date palm) 22

Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1

NCBI_plasmid_sequences_(Plasmids) 6

TargetDB__(Targets) 45

NCBI_viral_sequences_(Viral) 9

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 11

Protozoadb_2010_08_(Protozoadb) 48

STRING_v9.0.5_(STRING) 565

Uniprot_2018_03_genome 32070

NCBI_2017_08_genome 20449

Protein_Data_Bank_(all_PDB_sequenc) 3

UniProt__viral_sequences_(Viral) 2

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Domain combinations for 81606,_gap_ superfamilies in groups of genomes