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  Home > SCOP hierarchy > Domain combination - 81872,50249,81878,50249,_gap_

Domain combinations for 81872,50249,81878,50249,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

81872 - BRCA2 helical domain
50249 - Nucleic acid-binding proteins
81878 - BRCA2 tower domain
50249 - Nucleic acid-binding proteins

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Hymenolepis_microstoma_ 0
Echinococcus_multilocularis_ 0
Echinococcus_granulosus_ 0
Taenia_solium_   (Pork tapeworm)   0
Spizellomyces_punctatus_DAOM_BR117_ 0
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   0
Medicago_truncatula_   (Barrel medic)   1

Others
Genome     Number
NCBI_2017_08_genome 2
Uniprot_2018_03_genome 42

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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