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Home > SCOP hierarchy > Domain combination - _gap_,52540,53271

Domain combinations for _gap_,52540,53271 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52540 - P-loop containing nucleoside triphosphate hydrolases
53271 - PRTase-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Nomascus_leucogenys_76_1.0 (Northern white-cheeked gibbon) 1

Ficedula_albicollis_76_1.0 (Collared flycatcher) 1

Nasonia_vitripennis_ (Jewel wasp) 0

Drosophila_grimshawi_1.3 1

Drosophila_willistoni_1.3 1

Drosophila_pseudoobscura_2.13 1

Drosophila_persimilis_1.3 1

Drosophila_suzukii 1

Drosophila_yakuba_1.3 1

Drosophila_simulans_1.3 1

Drosophila_sechellia_1.3 1

Drosophila_melanogaster_76_5 (Fruit fly) 3

Drosophila_erecta_1.3 1

Drosophila_ananassae_1.3 1

Drosophila_virilis_1.2 1

Drosophila_mojavensis_1.3 1

Tribolium_castaneum_3.0 (Red flour beetle) 1

Capsaspora_owczarzaki_ATCC_30864_ 1

Candida_parapsilosis_ 1

Lodderomyces_elongisporus_NRRL_YB-4239_ 1

Brassica_rapa_Chiifu-401_1.2 (Field mustard) 1

Fragaria_vesca_ (Wild strawberry) 0

Linum_usitatissimum_v200 (Flax) 1

Oryza_nivara_22 0

Bigelowiella_natans_CCMP2755_22 1

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Strains
Genome Number

Drosophila_melanogaster_FlyBase_5.12_(FlyBase) (Fruit fly) 3

Lactococcus_lactis_subsp._lactis_KLDS_4.0325 1

Longest transcript per gene
Genome Number

Drosophila_melanogaster_69_5 (Fruit fly) 1

Others
Genome Number

STRING_v9.0.5_(STRING) 9

Uniprot_2018_03_genome 396

NCBI_2017_08_genome 100

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