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  Home > SCOP hierarchy > Domain combination - _gap_,56300,_gap_

Domain combinations for _gap_,56300,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56300 - Metallo-dependent phosphatases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   11
Pan_troglodytes_76_2.1.4   (Chimpanzee)   4
Gorilla_gorilla_76_3.1   (Western gorilla)   5
Pongo_abelii_76_2   (Sumatran orangutan)   2
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   7
Papio_anubis_76   (Olive baboon)   5
Macaca_mulatta_76_1   (Rhesus monkey)   6
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   7
Otolemur_garnettii_76_3   (Small-eared galago)   4
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Rattus_norvegicus_76_5.0   (Norway rat)   4
Mus_musculus_76_38   (House mouse)   10
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   3
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   2
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   4
Cavia_porcellus_76_3   (Domestic guinea pig)   3
Oryctolagus_cuniculus_76_2   (Rabbit)   4
Ochotona_princeps_76   (American pika)   3
Tupaia_belangeri_76   (Northern tree shrew)   2
Sus_scrofa_76_10.2   (Pig)   4
Bos_taurus_76_3.1   (Cattle)   5
Ovis_aries_76_3.1   (Sheep)   5
Vicugna_pacos_76_1   (Alpaca)   5
Tursiops_truncatus_76_1   (Bottlenose dolphin)   4
Mustela_putorius_furo_76_1.0   (Domestic ferret)   4
Ailuropoda_melanoleuca_76_1   (Giant panda)   5
Canis_familiaris_76_3.1   (Dog)   6
Felis_catus_76_6.2   (Domestic cat)   5
Equus_caballus_76_2   (Horse)   3
Myotis_lucifugus_76_2.0   (Little brown bat)   4
Pteropus_vampyrus_76_1   (Large flying fox)   4
Sorex_araneus_76_1   (European shrew)   3
Erinaceus_europaeus_76   (Western European hedgehog)   3
Procavia_capensis_76_1   (Cape rock hyrax)   2
Loxodonta_africana_76_3   (African savanna elephant)   6
Echinops_telfairi_76   (Small Madagascar hedgehog)   2
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   8
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   3
Macropus_eugenii_76_1.0   (Tammar wallaby)   2
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   7
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   7
Ornithorhynchus_anatinus_76_5   (Platypus)   2
Saccoglossus_kowalevskii_v3.0 10
Petromyzon_marinus_76_7.0   (Sea lamprey)   2
Meleagris_gallopavo_76_2   (Turkey)   7
Gallus_gallus_76_4   (Chicken)   5
Anas_platyrhynchos_76_1.0   (Mallard)   3
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   3
Ficedula_albicollis_76_1.0   (Collared flycatcher)   4
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   7
Anolis_carolinensis_76_2.0   (Green anole)   5
Xenopus_laevis_   (African clawed frog)   12
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   8
Latimeria_chalumnae_76_1   (Coelacanth)   7
Lepisosteus_oculatus_76   (Spotted gar)   10
Gadus_morhua_76_1   (Atlantic cod)   3
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   8
Takifugu_rubripes_76_4   (Torafugu)   24
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   9
Oryzias_latipes_76_1   (Japanese medaka)   6
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   6
Poecilia_formosa_76   (Amazon molly)   7
Oreochromis_niloticus_76_1.0   (Nile tilapia)   13
Astyanax_mexicanus_76   (Mexican tetra)   8
Danio_rerio_76_9   (Zebrafish)   8
Oikopleura_dioica 5
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   12
Ciona_intestinalis_76   (Vase tunicate)   2
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   3
Adineta_vaga 21
Octopus_bimaculoides_280 3
Crassostrea_gigas_22   (Pacific oyster)   4
Lottia_gigantea_   (Owl limpet)   2
Helobdella_robusta_ 5
Capitella_sp._I_ 2
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1
Heliconius_melpomene_   (Postman butterfly)   4
Bombyx_mori_   (Domestic silkworm)   1
Nasonia_vitripennis_   (Jewel wasp)   5
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   3
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   3
Linepithema_humile_v1.1   (Argentine ant)   3
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   2
Solenopsis_invicta_v.2.2.3   (Red fire ant)   2
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   3
Atta_cephalotes_v1.1 2
Camponotus_floridanus_v3.3   (Florida carpenter ant)   3
Lucilia_cuprina   (Australian sheep blowfly)   6
Drosophila_grimshawi_1.3 7
Drosophila_willistoni_1.3 7
Drosophila_pseudoobscura_2.13 5
Drosophila_persimilis_1.3 5
Drosophila_suzukii 0
Drosophila_yakuba_1.3 5
Drosophila_simulans_1.3 2
Drosophila_sechellia_1.3 7
Drosophila_melanogaster_76_5   (Fruit fly)   14
Drosophila_erecta_1.3 6
Drosophila_ananassae_1.3 7
Drosophila_virilis_1.2 4
Drosophila_mojavensis_1.3 7
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   6
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   6
Anopheles_darlingi_22   (American malaria mosquito)   4
Anopheles_gambiae_49_3j   (African malaria mosquito)   5
Tribolium_castaneum_3.0   (Red flour beetle)   2
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   3
Acyrthosiphon_pisum_   (Pea aphid)   2
Rhodnius_prolixus_22 1
Daphnia_pulex_   (Common water flea)   7
Strigamia_maritima_22 3
Sarcoptes_scabiei 4
Tetranychus_urticae_   (Two-spotted spider mite)   5
Pristionchus_pacificus_ 8
Meloidogyne_incognita_   (Southern root-knot nematode)   6
Meloidogyne_hapla_ 3
Onchocerca_volvulus_22 7
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   7
Caenorhabditis_japonica_ 4
Caenorhabditis_brenneri_ 7
Caenorhabditis_remanei_ 7
Caenorhabditis_elegans_76_235   (Roundworm)   9
Caenorhabditis_briggsae_2 3
Trichinella_spiralis_22 2
Hymenolepis_microstoma_ 2
Echinococcus_multilocularis_ 5
Echinococcus_granulosus_ 5
Taenia_solium_   (Pork tapeworm)   1
Schistosoma_mansoni_ 5
Mnemiopsis_leidyi   (Sea walnut)   6
Acropora_digitifera_v1.0 2
Nematostella_vectensis_1.0   (Starlet sea anemone)   4
Hydra_vulgaris 1
Amphimedon_queenslandica 3
Trichoplax_adhaerens_ 2
Proterospongia_sp._ATCC_50818_ 4
Monosiga_brevicollis_ 5
Sphaeroforma_arctica_JP610_ 4
Capsaspora_owczarzaki_ATCC_30864_ 11
Conidiobolus_coronatus_NRRL28638_v1.0 7
Mortierella_verticillata_NRRL_6337_ 8
Phycomyces_blakesleeanus_ 11
Rhizopus_oryzae_RA_99-880_ 5
Mucor_circinelloides_ 13
Rhizomucor_miehei_CAU432_ 8
Malassezia_globosa_CBS_7966_ 12
Sporisorium_reilianum_22 7
Ustilago_maydis_ 7
Mixia_osmundae_IAM_14324_v1.0 9
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 8
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 7
Melampsora_laricis-populina_ 6
Rhodotorula_graminis_WP1_v1.0 6
Sporobolomyces_roseus_IAM_13481_ 4
Microbotryum_violaceum_22 8
Wallemia_sebi_v1.0 2
Sphaerobolus_stellatus_v1.0 15
Piloderma_croceum_F_1598_v1.0 8
Serpula_lacrymans_var._lacrymans_S7.9_ 8
Coniophora_puteana 11
Hydnomerulius_pinastri_v2.0 10
Paxillus_rubicundulus_Ve08.2h10_v1.0 9
Pisolithus_microcarpus_441_v1.0 10
Pisolithus_tinctorius_Marx_270_v1.0 9
Scleroderma_citrinum_Foug_A_v1.0 9
Coprinopsis_cinerea_okayama7_130_v3 12
Pleurotus_ostreatus_   (Oyster mushroom)   10
Amanita_thiersii_Skay4041_v1.0 5
Amanita_muscaria_Koide_v1.0   (Fly agaric)   7
Galerina_marginata_v1.0 13
Hebeloma_cylindrosporum_h7_v2.0 10
Laccaria_bicolor_S238N-H82_ 9
Agaricus_bisporus_var._bisporus_ 5
Schizophyllum_commune_ 8
Stereum_hirsutum_FP-91666_SS1__v1.0 13
Heterobasidion_annosum_ 8
Gloeophyllum_trabeumv1.0 9
Punctularia_strigosozonata_v1.0 9
Sebacina_vermifera_MAFF_305830_v1.0 8
Fomitiporia_mediterranea_v1.0 11
Tulasnella_calospora_AL13/4D_v1.0 6
Postia_placenta_ 10
Wolfiporia_cocos_MD-104_SS10__v1.0 11
Fomitopsis_pinicolav1.0 10
Fomitopsis_pinicola_FP-58527_SS1_v3.0 10
Phanerochaete_chrysosporium_RP-78_2.1 6
Dichomitus_squalens 9
Trametes_versicolor_v1.0 9
Tremella_mesenterica_   (Witches' butter)   6
Daldinia_eschscholzii_EC12_v1.0 10
Apiospora_montagnei_NRRL_25634_v1.0 8
Magnaporthe_poae_ATCC_64411_22 6
Magnaporthe_grisea_70-15_ 7
Podospora_anserina_ 12
Sporotrichum_thermophile_ATCC_42464_ 7
Thielavia_terrestris_NRRL_8126_ 8
Chaetomium_globosum_CBS_148.51_ 8
Neurospora_tetrasperma_ 8
Neurospora_discreta_FGSC_8579_ 9
Neurospora_crassa_OR74A_ 8
Cryphonectria_parasitica_   (Chestnut blight fungus)   7
Verticillium_albo-atrum_VaMs.102_ 3
Verticillium_dahliae_VdLs.17_ 5
Acremonium_alcalophilumv_1.0 6
Glomerella_graminicola_22 7
Fusarium_graminearum_ 7
Nectria_haematococca_mpVI_ 7
Fusarium_oxysporum_f._sp._lycopersici_4286_ 8
Fusarium_verticillioides_7600_ 6
Trichoderma_asperellum_CBS_433.97_v1.0 8
Trichoderma_atroviride_ 8
Trichoderma_citrinoviride_v1.0 7
Trichoderma_reesei_1.2 7
Trichoderma_virens_Gv29-8_ 8
Trichoderma_longibrachiatum_ATCC_18648_v1.0 6
Trichoderma_harzianum_CBS_226.95_v1.0 7
Amorphotheca_resinae_v1.0   (Creosote fungus)   8
Botrytis_cinerea_B05.10_ 7
Sclerotinia_sclerotiorum_ 10
Blumeria_graminis_22 7
Didymella_exigua_CBS_183.55_v1.0 10
Leptosphaeria_maculans_22 10
Setosphaeria_turcica_v1.0 8
Cochliobolus_miyabeanus_ATCC_44560_v1.0 8
Cochliobolus_victoriae_FI3_v1.0 8
Cochliobolus_carbonum_26-R-13_v1.0 8
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   9
Alternaria_brassicicola_ 9
Cochliobolus_lunatus_m118_v2.0 8
Pyrenophora_teres_f._teres_22 9
Pyrenophora_tritici-repentis_ 7
Stagonospora_nodorum_ 10
Mycosphaerella_graminicola_IPO323_ 7
Zasmidium_cellare_ATCC_36951_v1.0 12
Dothistroma_septosporum 11
Septoria_musiva_v1.0 10
Mycosphaerella_fijiensis_CIRAD86_ 8
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 9
Paracoccidioides_brasiliensis_Pb18_ 6
Coccidioides_posadasii_RMSCC_3488_ 10
Coccidioides_immitis_RS_ 10
Ajellomyces_dermatitidis_SLH14081_ 9
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 9
Microsporum_canis_CBS_113480_ 7
Trichophyton_equinum_CBS_127.97_ 9
Trichophyton_verrucosum_HKI_0517_ 5
Arthroderma_benhamiae_CBS_112371_ 6
Trichophyton_tonsurans_CBS_112818_ 8
Trichophyton_rubrum_CBS_118892_ 8
Uncinocarpus_reesii_1704_ 8
Aspergillus_zonatus_v1.0 8
Penicillium_chrysogenum_Wisconsin_54-1255_ 9
Penicillium_chrysogenum_v1.0 9
Aspergillus_acidus_v1.0 8
Aspergillus_fumigatus_Af293 10
Aspergillus_brasiliensis_v1.0 9
Aspergillus_nidulans_FGSC_A4_ 8
Aspergillus_sydowii_v1.0 6
Aspergillus_versicolor_v1.0 7
Aspergillus_glaucus 8
Aspergillus_carbonarius_ITEM_5010_ 8
Neosartorya_fischeri_NRRL_181_ 11
Aspergillus_terreus_NIH2624_ 8
Aspergillus_tubingensis_v1.0 8
Aspergillus_wentii_v1.0 9
Aspergillus_oryzae_RIB40_ 9
Aspergillus_niger_22 8
Aspergillus_niger_ATCC_1015_ 7
Aspergillus_flavus_NRRL3357_ 10
Aspergillus_clavatus_NRRL_1_ 10
Penicillium_marneffei_ATCC_18224_ 7
Tuber_melanosporum_Mel28_22 7
Tuber_melanosporum_Vittad_   (Perigord truffle)   7
Hansenula_polymorpha_v2.0 6
Dekkera_bruxellensis_CBS_2499_v2.0 7
Pichia_membranifaciensv1.0 6
Candida_tanzawaensis_NRRL_Y-17324__v1.0 5
Candida_dubliniensis_CD36_ 8
Candida_tropicalis_MYA-3404_ 7
Candida_parapsilosis_ 8
Candida_albicans_SC5314 9
Lodderomyces_elongisporus_NRRL_YB-4239_ 8
Babjeviella_inositovora_NRRL_Y-12698_v1.0 7
Pichia_stipitis_CBS_6054_ 6
Candida_guilliermondii_ATCC_6260_ 6
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 7
Debaromyces_hansenii 6
Wickerhamomyces_anomalus 7
Pichia_pastoris_GS115_ 3
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 3
Yarrowia_lipolytica_CLIB122 17
Candida_lusitaniae_ATCC_42720_ 6
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 4
Vanderwaltozyma_polyspora_DSM_70294_ 3
Candida_glabrata_CBS138 4
Kluyveromyces_thermotolerans_CBS_6340 5
Lachancea_kluyveri_ 6
Kluyveromyces_waltii 6
Ashbya_gossypii_ATCC_10895_ 5
Zygosaccharomyces_rouxii_ 5
Saccharomyces_mikatae_MIT 5
Saccharomyces_paradoxus_MIT 6
Saccharomyces_cerevisiae_76   (Baker's yeast)   5
Saccharomyces_bayanus_MIT 5
Kluyveromyces_lactis 4
Schizosaccharomyces_cryophilus_OY26_22 4
Schizosaccharomyces_octosporus_yFS286_ 4
Schizosaccharomyces_japonicus_yFS275_ 3
Schizosaccharomyces_pombe   (Fission yeast)   3
Catenaria_anguillulae_PL171_v1.0 5
Allomyces_macrogynus_ATCC_38327_ 12
Spizellomyces_punctatus_DAOM_BR117_ 9
Dictyostelium_discoideum 5
Dictyostelium_purpureum_ 3
Entamoeba_dispar_1.2 19
Entamoeba_invadens_1.2 28
Entamoeba_histolytica_1 18
Selaginella_moellendorffii_ 9
Pinus_taeda   (Loblolly pine)   2
Picea_abies   (Norway spruce)   1
Eucalyptus_grandis_v201   (Rose gum)   13
Theobroma_cacao_B97-61/B2_v1   (Cacao)   5
Gossypium_raimondii_v221 19
Citrus_clementina_v165 4
Citrus_sinensis_v154   (Sweet orange)   15
Thellungiella_halophila_v173 8
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   8
Capsella_rubella_v183 7
Arabidopsis_lyrata_   (Lyrate rockcress)   4
Arabidopsis_thaliana_10   (Thale cress)   9
Carica_papaya_   (Papaya)   3
Medicago_truncatula_   (Barrel medic)   10
Phaseolus_vulgaris_v186   (French bean)   4
Glycine_max_v109   (Soybean)   10
Cucumis_sativus_v122   (Cucumber)   6
Fragaria_vesca_   (Wild strawberry)   5
Malus_domestica_v196   (Apple)   13
Prunus_persica_v139   (Peach)   3
Linum_usitatissimum_v200   (Flax)   6
Manihot_esculenta_v147   (Cassava)   7
Populus_trichocarpa_v156   (Black cottonwood)   6
Vitis_vinifera_   (Wine grape)   4
Mimulus_guttatus_v140   (Spotted monkey flower)   4
Solanum_lycopersicum_v.2.3   (Tomato)   3
Solanum_tuberosum_   (Potato)   3
Actinidia_chinensis_Hongyang_ 5
Aquilegia_coerulea_v195 10
Triticum_urartu_22 8
Triticum_aestivum_22   (Bread wheat)   12
Aegilops_tauschii_22 6
Brachypodium_distachyon_   (Stiff brome)   8
Oryza_barthii_22   (African wild rice)   7
Oryza_meridionalis_22 8
Oryza_glumaepatula_22 9
Oryza_glaberrima   (African rice)   4
Oryza_punctata_22 13
Oryza_nivara_22 11
Oryza_brachyantha_22   (Malo sina)   4
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   6
Oryza_sativa_v193   (Rice)   6
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   3
Panicum_virgatum_v202   (Switchgrass)   6
Setaria_italica_v164   (Foxtail millet)   8
Zea_mays_subsp._mays_   (Maize)   7
Zea_mays_v181   (Maize)   8
Sorghum_bicolor_   (Sorghum)   4
Musa_balbisiana   (Balbis banana)   4
Musa_acuminata_22   (Wild Malaysian banana)   3
Amborella_trichopoda_22 3
Physcomitrella_patens 9
Coccomyxa_subellipsoidea_sp._C-169_v2 4
Asterochloris_sp._Cgr/DA1pho_v1.0 3
Chlorella_variabilis_sp._NC64A_ 4
Chlorella_vulgaris_ 4
Volvox_carteri_f._nagariensis_ 5
Volvox_carteri_v199 6
Chlamydomonas_reinhardtii_4.0 3
Ostreococcus_sp._RCC809_ 1
Ostreococcus_lucimarinus_CCE9901_ 1
Ostreococcus_tauri_ 4
Bathycoccus_prasinos_ 7
Micromonas_sp._RCC299_ 6
Micromonas_pusilla_CCMP1545_v3.0 5
Cyanidioschyzon_merolae_strain_10D_22 3
Cyanidioschyzon_merolae 3
Porphyridium_purpureum_02_2012 1
Thecamonas_trahens_ATCC_50062_ 11
Bigelowiella_natans_CCMP2755_22 13
Giardia_lamblia_2.3 3
Leishmania_mexicana_2.4 9
Leishmania_major_strain_Friedlin_ 9
Leishmania_infantum_JPCM5_2.4 9
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 9
Trypanosoma_vivax_ 7
Trypanosoma_cruzi_strain_CL_Brener 7
Trypanosoma_congolense_2.4 7
Trypanosoma_brucei_gambiense_v4.1 7
Trypanosoma_brucei_TREU927_v4.1 7
Ectocarpus_siliculosus 8
Aureococcus_anophagefferens_ 1
Albugo_laibachii_22 14
Pythium_iwayamai_DAOM_BR242034_22 5
Pythium_arrhenomanes_ATCC_12531_22 6
Pythium_ultimum_v1.7-2 11
Pythium_aphanidermatum_DAOM_BR444_22 8
Pythium_irregulare_DAOM_BR486_22 10
Pythium_vexans_DAOM_BR484_22 6
Phytophthora_ramorum_1.1   (Sudden oak death agent)   10
Phytophthora_sojae_1.1 14
Phytophthora_infestans_T30-4_ 12
Phytophthora_capsici_ 6
Hyaloperonospora_arabidopsidis_22 4
Phaeodactylum_tricornutumCCAP_1055/1 5
Fragilariopsis_cylindrus 12
Thalassiosira_pseudonana_CCMP1335 11
Perkinsus_marinus_ATCC_50983_ 9
Paramecium_tetraurelia_ 23
Tetrahymena_thermophila_SB210_1_ 11
Ichthyophthirius_multifiliis_strain_G5_ 5
Cryptosporidium_hominis 1
Cryptosporidium_muris 3
Cryptosporidium_parvum_Iowa_II 2
Neospora_caninum 7
Toxoplasma_gondii_VEG 7
Toxoplasma_gondii_ME49 7
Toxoplasma_gondii_GT1 7
Babesia_bovis_T2Bo_ 2
Theileria_parva__ 1
Theileria_annulata 2
Plasmodium_falciparum_3D7_ 3
Plasmodium_vivax_SaI-1_7.0 4
Plasmodium_knowlesi_strain_H_ 4
Plasmodium_yoelii_ssp._yoelii_1_ 4
Plasmodium_chabaudi_ 4
Plasmodium_berghei_ANKA_ 4
Symbiodinium_minutum_clade_B1_v1.2 18
Naegleria_gruberi_ 9
Trichomonas_vaginalis_ 18
Guillardia_theta_CCMP2712_v1.0_ 4
Emiliania_huxleyi_CCMP1516_ 12
Acaryochloris_marina_MBIC11017 1
Synechocystis_sp._PCC_6803 0
Synechococcus_sp._PCC_7502 0
Synechococcus_sp._PCC_6312 0
Microcoleus_sp._PCC_7113 2
Trichodesmium_erythraeum_IMS101 1
Geitlerinema_sp._PCC_7407 1
Cyanothece_sp._PCC_8802 0
Gloeocapsa_sp._PCC_7428 1
Halothece_sp._PCC_7418 0
Gloeobacter_violaceus_PCC_7421 3
Rivularia_sp._PCC_7116 5
Calothrix_sp._PCC_7507 3
Anabaena_variabilis_ATCC_29413 3
Nostoc_sp._PCC_7107 3
Nostoc_punctiforme_PCC_73102 4
Nostoc_sp._PCC_7120 3
Nostoc_sp._PCC_7524 4
Anabaena_sp._90 1
Conexibacter_woesei_DSM_14684 3
Eggerthella_lenta_DSM_2243 1
Slackia_heliotrinireducens_DSM_20476 2
Olsenella_uli_DSM_7084 1
Rubrobacter_xylanophilus_DSM_9941 2
Ilumatobacter_coccineus 2
Acidimicrobium_ferrooxidans_DSM_10331 1
Nakamurella_multipartita_DSM_44233 1
Modestobacter_marinus 3
Blastococcus_saxobsidens_DD2 1
Geodermatophilus_obscurus_DSM_43160 1
Kineococcus_radiotolerans_SRS30216 2
Stackebrandtia_nassauensis_DSM_44728 2
Frankia_symbiont_of_Datisca_glomerata 3
Frankia_sp._EAN1pec 1
Frankia_alni_ACN14a 3
Thermobifida_fusca_YX 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1
Thermomonospora_curvata_DSM_43183 2
Streptosporangium_roseum_DSM_43021 3
Streptomyces_coelicolor_A3(2) 2
Streptomyces_sp._PAMC26508 2
Streptomyces_flavogriseus_ATCC_33331 2
Streptomyces_sp._SirexAA-E 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 1
Streptomyces_bingchenggensis_BCW-1 1
Streptomyces_violaceusniger_Tu_4113 2
Streptomyces_avermitilis_MA-4680 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Streptomyces_scabiei_87.22 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 2
Actinosynnema_mirum_DSM_43827 1
Saccharomonospora_viridis_DSM_43017 1
Pseudonocardia_dioxanivorans_CB1190 1
Saccharopolyspora_erythraea_NRRL_2338 1
Amycolatopsis_mediterranei_U32 2
Kribbella_flavida_DSM_17836 3
Nocardioides_sp._JS614 1
Propionibacterium_acnes_SK137 1
Microlunatus_phosphovorus_NM-1 2
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 1
Salinispora_arenicola_CNS-205 2
Salinispora_tropica_CNB-440 2
Verrucosispora_maris_AB-18-032 2
Micromonospora_sp._L5 3
Micromonospora_aurantiaca_ATCC_27029 3
Actinoplanes_sp._N902-109 3
Actinoplanes_sp._SE50/110 3
Actinoplanes_missouriensis_431 3
Gordonia_sp._KTR9 1
Gordonia_polyisoprenivorans_VH2 1
Rhodococcus_jostii_RHA1 2
Rhodococcus_equi_103S 2
Rhodococcus_opacus_B4 2
Rhodococcus_erythropolis_PR4 3
Amycolicicoccus_subflavus_DQS3-9A1 2
Mycobacterium_massiliense_str._GO_06 1
Mycobacterium_abscessus_ATCC_19977 1
Mycobacterium_sp._JLS 1
Mycobacterium_vanbaalenii_PYR-1 3
Mycobacterium_rhodesiae_NBB3 1
Mycobacterium_gilvum_PYR-GCK 1
Mycobacterium_marinum_M 1
Corynebacterium_resistens_DSM_45100 2
Corynebacterium_aurimucosum_ATCC_700975 0
Corynebacterium_kroppenstedtii_DSM_44385 1
Corynebacterium_efficiens_YS-314 1
Corynebacterium_urealyticum_DSM_7109 1
Corynebacterium_jeikeium_K411 1
Corynebacterium_variabile_DSM_44702 2
Corynebacterium_glutamicum_R 1
Kytococcus_sedentarius_DSM_20547 1
Beutenbergia_cavernae_DSM_12333 0
Microbacterium_testaceum_StLB037 0
Intrasporangium_calvum_DSM_43043 2
Isoptericola_variabilis_225 1
Xylanimonas_cellulosilytica_DSM_15894 1
Cellulomonas_fimi_ATCC_484 1
[Cellvibrio]_gilvus_ATCC_13127 0
Arthrobacter_phenanthrenivorans_Sphe3 1
Arthrobacter_arilaitensis_Re117 0
Arthrobacter_sp._FB24 2
Gardnerella_vaginalis_409-05 1
Bifidobacterium_longum_subsp._longum_JDM301 1
Bifidobacterium_animalis_subsp._lactis_Bl-04 1
Bifidobacterium_dentium_Bd1 2
Bifidobacterium_bifidum_S17 2
Bifidobacterium_adolescentis_ATCC_15703 2
Actinomyces_sp._F0330 1
Dehalococcoides_ethenogenes_195 3
Dehalococcoides_sp._BAV1 1
Sphaerobacter_thermophilus_DSM_20745 1
Herpetosiphon_aurantiacus_DSM_785 2
Roseiflexus_sp._RS-1 2
Chloroflexus_sp._MS-G 1
Chloroflexus_aggregans_DSM_9485 1
Chloroflexus_aurantiacus_J-10-fl 1
Deinococcus_radiodurans_R1 1
Anaerococcus_prevotii_DSM_20548 2
Finegoldia_magna_ATCC_29328 1
Veillonella_parvula_DSM_2008 1
Selenomonas_sputigena_ATCC_35185 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1
Ethanoligenens_harbinense_YUAN-3 1
Ruminococcus_sp. 1
Ruminococcus_albus_7 1
Thermaerobacter_marianensis_DSM_12885 1
butyrate-producing_bacterium_SS3/4 2
Thermincola_potens_JR 1
Desulfosporosinus_acidiphilus_SJ4 1
Desulfosporosinus_orientis_DSM_765 1
Desulfitobacterium_hafniense_Y51 1
Acetobacterium_woodii_DSM_1030 2
Eubacterium_eligens_ATCC_27750 2
Clostridium_difficile_630 1
Clostridium_sticklandii_DSM_519 1
Clostridium_saccharolyticum_WM1 4
Clostridium_lentocellum_DSM_5427 2
[Ruminococcus]_obeum 2
Eubacterium_rectale_M104/1 1
Eubacterium_rectale_ATCC_33656 1
Butyrivibrio_proteoclasticus_B316 2
Alkaliphilus_metalliredigens_QYMF 1
Clostridium_kluyveri_DSM_555 0
Clostridium_beijerinckii_NCIMB_8052 1
Clostridium_cellulovorans_743B 2
Clostridium_botulinum_A_str._ATCC_3502 1
Clostridium_acetobutylicum_ATCC_824 1
Halothermothrix_orenii_H_168 1
Carnobacterium_sp._WN1359 1
Aerococcus_urinae_ACS-120-V-Col10a 1
Tetragenococcus_halophilus_NBRC_12172 1
Lactobacillus_casei_ATCC_334 1
Lactobacillus_rhamnosus_Lc_705 1
Lactobacillus_salivarius_CECT_5713 1
Lactobacillus_sakei_subsp._sakei_23K 1
Lactobacillus_plantarum_JDM1 1
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 1
Pediococcus_pentosaceus_ATCC_25745 1
Lactococcus_garvieae_ATCC_49156 1
Lactococcus_lactis_subsp._cremoris_MG1363 1
Streptococcus_intermedius_JTH08 1
Streptococcus_uberis_0140J 1
Streptococcus_parauberis_KCTC_11537 1
Streptococcus_parasanguinis_ATCC_15912 1
Streptococcus_agalactiae_A909 1
Streptococcus_suis_P1/7 1
Streptococcus_sanguinis_SK36 1
Paenibacillus_sp._JDR-2 0
Paenibacillus_mucilaginosus_3016 2
Listeria_welshimeri_serovar_6b_str._SLCC5334 2
Listeria_innocua_Clip11262 2
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 2
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 2
Listeria_ivanovii_subsp._ivanovii_PAM_55 2
Geobacillus_thermoglucosidasius_C56-YS93 0
Halobacillus_halophilus_DSM_2266 1
Bacillus_sp._JS 2
Bacillus_amyloliquefaciens_FZB42 3
Bacillus_atrophaeus_1942 3
Bacillus_subtilis_subsp._subtilis_str._168 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1
Bacillus_pumilus_SAFR-032 0
Bacillus_megaterium_DSM_319 2
Staphylococcus_pseudintermedius_HKU10-03 1
Staphylococcus_lugdunensis_HKU09-01 1
Staphylococcus_epidermidis_RP62A 1
Staphylococcus_carnosus_subsp._carnosus_TM300 1
Candidatus_Cloacamonas_acidaminovorans 0
Chlorobium_phaeobacteroides_DSM_266 0
Chloroherpeton_thalassium_ATCC_35110 1
Haliscomenobacter_hydrossis_DSM_1100 1
Saprospira_grandis_str._Lewin 1
Niastella_koreensis_GR20-10 2
Chitinophaga_pinensis_DSM_2588 1
Salinibacter_ruber_M8 3
Flexibacter_litoralis_DSM_6794 2
Cyclobacterium_marinum_DSM_745 5
Fibrella_aestuarina 1
Leadbetterella_byssophila_DSM_17132 1
Dyadobacter_fermentans_DSM_18053 1
Parabacteroides_distasonis_ATCC_8503 2
Tannerella_forsythia_ATCC_43037 1
Odoribacter_splanchnicus_DSM_20712 1
Bacteroides_sp._CF50 3
Prevotella_melaninogenica_ATCC_25845 1
Prevotella_denticola_F0289 1
Porphyromonas_asaccharolytica_DSM_20707 2
Porphyromonas_gingivalis_ATCC_33277 1
Alistipes_finegoldii_DSM_17242 3
Bacteroides_salanitronis_DSM_18170 4
Bacteroides_helcogenes_P_36-108 1
Bacteroides_vulgatus_ATCC_8482 1
Bacteroides_thetaiotaomicron_VPI-5482 1
Bacteroides_fragilis_YCH46 1
Pedobacter_saltans_DSM_12145 2
Solitalea_canadensis_DSM_3403 1
Pedobacter_heparinus_DSM_2366 2
Fluviicola_taffensis_DSM_16823 1
Owenweeksia_hongkongensis_DSM_17368 2
Zunongwangia_profunda_SM-A87 2
Krokinobacter_sp._4H-3-7-5 1
Croceibacter_atlanticus_HTCC2559 1
Aequorivita_sublithincola_DSM_14238 1
Zobellia_galactanivorans 3
Cellulophaga_algicola_DSM_14237 1
Cellulophaga_lytica_DSM_7489 2
Flavobacterium_johnsoniae_UW101 2
Waddlia_chondrophila_WSU_86-1044 1
Phycisphaera_mikurensis_NBRC_102666 1
Planctomyces_brasiliensis_DSM_5305 3
Planctomyces_limnophilus_DSM_3776 1
Rhodopirellula_baltica_SH_1 1
Brachyspira_murdochii_DSM_12563 1
Sphaerochaeta_pleomorpha_str._Grapes 1
Treponema_primitia_ZAS-2 1
Treponema_brennaborense_DSM_12168 1
Treponema_denticola_ATCC_35405 1
Denitrovibrio_acetiphilus_DSM_12809 2
Thermotoga_lettingae_TMO 1
Candidatus_Solibacter_usitatus_Ellin6076 1
Granulicella_tundricola_MP5ACTX9 2
Granulicella_mallensis_MP5ACTX8 1
Candidatus_Koribacter_versatilis_Ellin345 2
Acidobacterium_capsulatum_ATCC_51196 1
Sebaldella_termitidis_ATCC_33386 2
Ilyobacter_polytropus_DSM_2926 1
Arcobacter_sp._L 1
Desulfotalea_psychrophila_LSv54 1
Desulfatibacillum_alkenivorans_AK-01 2
Desulfobacterium_autotrophicum_HRM2 1
Desulfococcus_oleovorans_Hxd3 1
Desulfovibrio_magneticus_RS-1 3
Geobacter_lovleyi_SZ 2
Geobacter_bemidjiensis_Bem 1
Pelobacter_carbinolicus_DSM_2380 1
Babela_massiliensis 0
Haliangium_ochraceum_DSM_14365 6
Sorangium_cellulosum_'So_ce_56' 5
Anaeromyxobacter_sp._Fw109-5 3
Anaeromyxobacter_dehalogenans_2CP-1 2
Stigmatella_aurantiaca_DW4/3-1 5
Corallococcus_coralloides_DSM_2259 4
Myxococcus_xanthus_DK_1622 3
Myxococcus_fulvus_HW-1 2
Chromobacterium_violaceum_ATCC_12472 1
Rubrivivax_gelatinosus_IL144 1
Leptothrix_cholodnii_SP-6 2
Burkholderia_phymatum_STM815 1
Ralstonia_eutropha_JMP134 1
Cupriavidus_taiwanensis_LMG_19424 1
Cupriavidus_metallidurans_CH34 1
Cupriavidus_necator_N-1 3
Ralstonia_eutropha_H16 2
Ralstonia_pickettii_12D 1
Ralstonia_solanacearum_CFBP2957 1
Burkholderia_sp._CCGE1002 1
Delftia_sp._Cs1-4 2
Delftia_acidovorans_SPH-1 2
Polaromonas_naphthalenivorans_CJ2 1
Variovorax_paradoxus_S110 1
Acidovorax_ebreus_TPSY 1
Acidovorax_sp._JS42 1
Comamonas_testosteroni_CNB-2 1
Collimonas_fungivorans_Ter331 2
Bordetella_parapertussis_12822 1
Bordetella_bronchiseptica_RB50 1
Sideroxydans_lithotrophicus_ES-1 1
Parvularcula_bermudensis_HTCC2503 1
Asticcacaulis_excentricus_CB_48 1
Brevundimonas_subvibrioides_ATCC_15264 1
Caulobacter_sp._K31 1
Caulobacter_crescentus_NA1000 1
Caulobacter_segnis_ATCC_21756 1
Novosphingobium_sp._PP1Y 1
Sphingobium_sp._SYK-6 1
Sphingobium_chlorophenolicum_L-1 3
Maricaulis_maris_MCS10 1
Hyphomonas_neptunium_ATCC_15444 1
Jannaschia_sp._CCS1 1
Paracoccus_denitrificans_PD1222 2
Tistrella_mobilis_KA081020-065 0
Rhodospirillum_centenum_SW 3
Gluconacetobacter_xylinus_NBRC_3288 1
Gluconacetobacter_diazotrophicus_PAl_5 1
Methylobacterium_chloromethanicum_CM4 0
Methylobacterium_extorquens_AM1 0
Methylobacterium_sp._4-46 1
Methylobacterium_nodulans_ORS_2060 1
Methylobacterium_radiotolerans_JCM_2831 1
Parvibaculum_lavamentivorans_DS-1 2
Sinorhizobium_fredii_NGR234 2
Sinorhizobium_medicae_WSM419 1
Sinorhizobium_meliloti_AK83 1
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1
Agrobacterium_tumefaciens_str._C58 1
Agrobacterium_sp._H13-3 1
Agrobacterium_vitis_S4 1
Mesorhizobium_sp._BNC1 1
Mesorhizobium_opportunistum_WSM2075 1
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1
Pelagibacterium_halotolerans_B2 1
Rhodopseudomonas_palustris_BisA53 1
Bradyrhizobium_sp._ORS_278 1
Saccharophagus_degradans_2-40 1
Teredinibacter_turnerae_T7901 2
Cellvibrio_japonicus_Ueda107 2
Oceanimonas_sp._GK1 1
Vibrio_sp._Ex25 1
Vibrio_harveyi_ATCC_BAA-1116 1
Vibrio_parahaemolyticus_RIMD_2210633 1
Psychromonas_ingrahamii_37 0
Idiomarina_loihiensis_L2TR 2
Ferrimonas_balearica_DSM_9799 1
Shewanella_piezotolerans_WP3 1
Shewanella_loihica_PV-4 1
Shewanella_halifaxensis_HAW-EB4 1
Shewanella_sediminis_HAW-EB3 1
Shewanella_denitrificans_OS217 2
Shewanella_pealeana_ATCC_700345 1
Shewanella_oneidensis_MR-1 1
Shewanella_baltica_OS185 1
Shewanella_woodyi_ATCC_51908 1
Shewanella_sp._MR-4 1
Shewanella_amazonensis_SB2B 1
Shewanella_frigidimarina_NCIMB_400 1
Shewanella_putrefaciens_CN-32 1
Colwellia_psychrerythraea_34H 1
Pseudoalteromonas_atlantica_T6c 2
Pseudoalteromonas_haloplanktis_TAC125 0
Glaciecola_sp._4H-3-7+YE-5 3
Glaciecola_nitratireducens_FR1064 1
Marinobacter_adhaerens_HP15 3
Marinobacter_hydrocarbonoclasticus_ATCC_49840 1
Marinobacter_aquaeolei_VT8 1
Alteromonas_sp._SN2 2
Alteromonas_macleodii_str._'Deep_ecotype' 2
Kangiella_koreensis_DSM_16069 1
Hahella_chejuensis_KCTC_2396 3
Halomonas_elongata_DSM_2581 1
Methylomicrobium_alcaliphilum 1
Methylomonas_methanica_MC09 1
Pseudoxanthomonas_suwonensis_11-1 1
Stenotrophomonas_maltophilia_K279a 1
Xanthomonas_axonopodis_pv._citri_str._306 1
Xanthomonas_campestris_pv._campestris_str._B100 2
Halothiobacillus_neapolitanus_c2 1
Thiocystis_violascens_DSM_198 1
Nitrosococcus_watsonii_C-113 1
Nitrosococcus_halophilus_Nc4 1
Nitrosococcus_oceani_ATCC_19707 1
Coxiella_burnetii_Dugway_5J108-111 1
Legionella_longbeachae_NSW150 1
gamma_proteobacterium_HdN1 1
Photorhabdus_asymbiotica 1
Rahnella_sp._Y9602 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1
Pectobacterium_wasabiae_WPP163 2
Pectobacterium_sp._SCC3193 2
Pectobacterium_atrosepticum_SCRI1043 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 1
Erwinia_sp._Ejp617 1
Citrobacter_rodentium_ICC168 1
Citrobacter_koseri_ATCC_BAA-895 1
Azotobacter_vinelandii_DJ 1
Pseudomonas_sp._UW4 1
Pseudomonas_entomophila_L48 1
Pseudomonas_syringae_pv._tomato_str._DC3000 1
Pseudomonas_stutzeri_A1501 1
Pseudomonas_putida_F1 1
Pseudomonas_fluorescens_SBW25 1
Pseudomonas_mendocina_ymp 1
Pseudomonas_aeruginosa_UCBPP-PA14 1
Pseudomonas_sp._VLB120 2
Psychrobacter_sp._PRwf-1 1
Psychrobacter_arcticus_273-4 1
Moraxella_catarrhalis_RH4 1
Acinetobacter_oleivorans_DR1 1
Acinetobacter_calcoaceticus_PHEA-2 1
Acinetobacter_baumannii_ATCC_17978 1
Acinetobacter_sp._ADP1 0
Methylophaga_sp._JAM1 1
Hyperthermus_butylicus_DSM_5456 1
Thermogladius_cellulolyticus_1633 1
Aeropyrum_pernix_K1 1
Thermosphaera_aggregans_DSM_11486 1
Staphylothermus_hellenicus_DSM_12710 1
Staphylothermus_marinus_F1 1
Desulfurococcus_fermentans_DSM_16532 1
Desulfurococcus_kamchatkensis_1221n 1
Desulfurococcus_mucosus_DSM_2162 1
Thermofilum_sp._1910b 1
Thermofilum_pendens_Hrk_5 1
Pyrobaculum_sp._1860 1
Pyrobaculum_calidifontis_JCM_11548 1
Pyrobaculum_arsenaticum_DSM_13514 1
Pyrobaculum_oguniense_TE7 1
Thermoproteus_neutrophilus_V24Sta 1
Pyrobaculum_aerophilum_str._IM2 1
Pyrobaculum_islandicum_DSM_4184 1
Methanosarcina_barkeri_str._Fusaro 1
Methanosphaerula_palustris_E1-9c 1
Thermococcus_sp._4557 1
Thermococcus_onnurineus_NA1 1
Thermococcus_kodakarensis_KOD1 1
Thermococcus_gammatolerans_EJ3 1
Thermococcus_sibiricus_MM_739 1
Thermococcus_barophilus_MP 1
Haloterrigena_turkmenica_DSM_5511 1
Natrialba_magadii_ATCC_43099 1
Haloarcula_marismortui_ATCC_43049 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   11
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   7
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   6
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   6
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   9
Cryptococcus_neoformans_var._grubii_H99_ 6
Cryptococcus_neoformans_B-3501A_ 7
Cryptococcus_neoformans_JEC21_ 7
Paracoccidioides_brasiliensis_Pb01_ 7
Paracoccidioides_brasiliensis_Pb03_ 6
Coccidioides_posadasii_str._Silveira_ 10
Coccidioides_immitis_RMSCC_3703_ 5
Coccidioides_immitis_RMSCC_2394_ 10
Coccidioides_immitis_H538.4_ 10
Ajellomyces_dermatitidis_ER-3_ 9
Histoplasma_capsulatum_H143 4
Histoplasma_capsulatum_H88 8
Histoplasma_capsulatum_G186AR 8
Aspergillus_fumigatus_A1163_ 10
Candida_albicans_WO-1_ 7
Saccharomyces_cerevisiae_UC5 4
Saccharomyces_cerevisiae_PW5 4
Saccharomyces_cerevisiae_FL100 3
Saccharomyces_cerevisiae_CBS7960 5
Saccharomyces_cerevisiae_YJM269 4
Saccharomyces_cerevisiae_T7 4
Saccharomyces_cerevisiae_FostersB 4
Saccharomyces_cerevisiae_FostersO 3
Saccharomyces_cerevisiae_VL3 3
Saccharomyces_cerevisiae_Vin13 4
Saccharomyces_cerevisiae_AWRI796 2
Saccharomyces_cerevisiae_Sigma1278b 5
Saccharomyces_cerevisiae_W303 4
Saccharomyces_cerevisiae_JAY291 5
Saccharomyces_cerevisiae_AWRI1631 3
Saccharomyces_cerevisiae_YPS163 3
Saccharomyces_cerevisiae_M22 1
Saccharomyces_cerevisiae_T73 3
Saccharomyces_cerevisiae_CLIB215 2
Saccharomyces_cerevisiae_Y10 2
Saccharomyces_cerevisiae_YJM789_ 5
Saccharomyces_cerevisiae_YJM789 5
Saccharomyces_cerevisiae_RM11-1a 5
Saccharomyces_cerevisiae_RM11-1a_ 5
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   5
Schizosaccharomyces_pombe_972h-_ 3
Batrachochytrium_dendrobatidis_JEL423_ 4
Batrachochytrium_dendrobatidis_JAM81_ 4
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   4
Hordeum_vulgare_22   (Domesticated barley)   9
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   6
Trypanosoma_brucei_Lister_427_v4.1 7
Neospora_caninum_Nc-Liverpool_6.2 7
Plasmodium_falciparum_HB3_ 4
Plasmodium_falciparum_Dd2_ 2
Chroococcidiopsis_thermalis_PCC_7203 2
Chamaesiphon_minutus_PCC_6605 2
Synechocystis_sp._PCC_6803_substr._PCC-P 0
Synechocystis_sp._PCC_6803_substr._PCC-N 0
Synechocystis_sp._PCC_6803_substr._GT-I 0
Synechocystis_sp._PCC_6803 0
Cyanobium_gracile_PCC_6307 1
Dactylococcopsis_salina_PCC_8305 0
Synechococcus_sp._WH_7803 1
Crinalium_epipsammum_PCC_9333 2
Oscillatoria_nigro-viridis_PCC_7112 2
Oscillatoria_acuminata_PCC_6304 2
Arthrospira_platensis_NIES-39 1
Cyanothece_sp._PCC_7822 2
Cyanothece_sp._PCC_7425 1
Cyanothece_sp._PCC_7424 2
Cyanothece_sp._ATCC_51142 2
Cyanothece_sp._PCC_8801 1
Cyanobacterium_aponinum_PCC_10605 0
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 2
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 2
Stanieria_cyanosphaera_PCC_7437 2
Calothrix_parietina_Calothrix_sp._PCC_6303 3
Cylindrospermum_stagnale_PCC_7417 3
Anabaena_cylindrica_PCC_7122 2
Gordonibacter_pamelaeae_7-10-1-b 0
Frankia_sp._EuI1c 3
Frankia_sp._CcI3 2
Nocardiopsis_alba_ATCC_BAA-2165 3
Streptomyces_albus_J1074 1
Streptomyces_rapamycinicus_NRRL_5491 2
Streptomyces_davawensis_JCM_4913 2
Streptomyces_fulvissimus_DSM_40593 1
Streptomyces_collinus_Tu_365 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 2
Saccharothrix_espanaensis_DSM_44229 2
Amycolatopsis_mediterranei_RB 2
Amycolatopsis_mediterranei_S699 2
Amycolatopsis_mediterranei_S699 2
Amycolatopsis_orientalis_HCCB10007 2
Propionibacterium_avidum_44067 1
Propionibacterium_acnes_ATCC_11828 1
Propionibacterium_acnes_TypeIA2_P.acn31 1
Propionibacterium_acnes_TypeIA2_P.acn17 1
Propionibacterium_acnes_TypeIA2_P.acn33 1
Propionibacterium_acnes_C1 1
Propionibacterium_acnes_HL096PA1 1
Propionibacterium_acnes_6609 1
Propionibacterium_acnes_266 1
Propionibacterium_acnes_KPA171202 1
Actinoplanes_friuliensis_DSM_7358 2
Rhodococcus_pyridinivorans_SB3094 1
Rhodococcus_erythropolis_CCM2595 3
Nocardia_brasiliensis_ATCC_700358 1
Mycobacterium_abscessus_subsp._bolletii_50594 1
Mycobacterium_sp._KMS 1
Mycobacterium_sp._MCS 1
Mycobacterium_gilvum_Spyr1 1
Corynebacterium_maris_DSM_45190 2
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 3
Corynebacterium_terpenotabidum_Y-11 1
Corynebacterium_urealyticum_DSM_7111 1
Corynebacterium_callunae_DSM_20147 1
Corynebacterium_glutamicum_MB001 1
Corynebacterium_glutamicum_SCgG2 1
Corynebacterium_glutamicum_SCgG1 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_glutamicum_ATCC_13032 1
Gardnerella_vaginalis_HMP9231 1
Gardnerella_vaginalis_ATCC_14019 1
Bifidobacterium_longum_NCC2705 1
Bifidobacterium_longum_DJO10A 1
Bifidobacterium_longum_subsp._infantis_157F 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 1
Bifidobacterium_longum_subsp._longum_KACC_91563 1
Bifidobacterium_longum_subsp._longum_BBMN68 1
Bifidobacterium_longum_subsp._longum_F8 1
Bifidobacterium_longum_subsp._longum_JCM_1217 1
Bifidobacterium_thermophilum_RBL67 2
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 1
Bifidobacterium_animalis_subsp._lactis_Bl12 1
Bifidobacterium_animalis_subsp._lactis_B420 1
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 1
Bifidobacterium_animalis_subsp._lactis_BLC1 1
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 1
Bifidobacterium_animalis_subsp._lactis_Bi-07 1
Bifidobacterium_animalis_subsp._lactis_V9 1
Bifidobacterium_animalis_subsp._lactis_DSM_10140 1
Bifidobacterium_animalis_subsp._lactis_BB-12 1
Bifidobacterium_animalis_subsp._lactis_AD011 1
Bifidobacterium_breve_UCC2003 1
Bifidobacterium_asteroides_PRL2011 1
Bifidobacterium_bifidum_PRL2010 3
Bifidobacterium_bifidum_BGN4 2
Actinomyces_graevenitzii_C83_ 1
Actinomyces_odontolyticus_ATCC_17982 1
Actinomyces_viscosus_C505 2
Dehalococcoides_mccartyi_DCMB5 1
Desulfosporosinus_meridiei_DSM_13257 1
Desulfitobacterium_hafniense_DCB-2 1
Clostridium_difficile_BI1 1
Clostridium_difficile_R20291 1
Clostridium_difficile_CD196 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 2
Coprococcus_catus_GD/7 1
Clostridium_saccharobutylicum_DSM_13864 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1
Clostridium_kluyveri_NBRC_12016 0
Clostridium_pasteurianum_BC1 2
Clostridium_botulinum_H04402_065 1
Clostridium_botulinum_BKT015925 1
Clostridium_botulinum_F_str._230613 1
Clostridium_botulinum_F_str._Langeland 1
Clostridium_botulinum_B1_str._Okra 1
Clostridium_botulinum_Ba4_str._657 1
Clostridium_botulinum_A2_str._Kyoto 1
Clostridium_botulinum_A3_str._Loch_Maree 1
Clostridium_botulinum_A_str._Hall 1
Clostridium_botulinum_A_str._ATCC_19397 1
Clostridium_acetobutylicum_DSM_1731 1
Clostridium_acetobutylicum_EA_2018 1
Carnobacterium_maltaromaticum_LMA28 2
Enterococcus_casseliflavus_EC20 2
Enterococcus_faecalis_OG1RF 1
Lactobacillus_paracasei_subsp._paracasei_8700:2 1
Lactobacillus_casei_LOCK919 1
Lactobacillus_casei_W56 1
Lactobacillus_casei_LC2W 1
Lactobacillus_casei_BD-II 1
Lactobacillus_casei_BL23 1
Lactobacillus_casei_str._Zhang 1
Lactobacillus_rhamnosus_LOCK908 1
Lactobacillus_rhamnosus_LOCK900 1
Lactobacillus_rhamnosus_ATCC_8530 1
Lactobacillus_plantarum_16 1
Lactobacillus_plantarum_ZJ316 1
Lactobacillus_plantarum_subsp._plantarum_ST-III 1
Lactobacillus_plantarum_subsp._plantarum_P-8 1
Lactobacillus_plantarum_WCFS1 1
Pediococcus_pentosaceus_SL4 1
Lactococcus_garvieae_Lg2 1
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 1
Lactococcus_lactis_subsp._lactis_IO-1 1
Lactococcus_lactis_subsp._lactis_CV56 1
Lactococcus_lactis_subsp._lactis_KF147 1
Lactococcus_lactis_subsp._lactis_Il1403 1
Lactococcus_lactis_subsp._cremoris_KW2 1
Lactococcus_lactis_subsp._cremoris_A76 1
Lactococcus_lactis_subsp._cremoris_NZ9000 1
Streptococcus_intermedius_B196 1
Streptococcus_iniae_SF1 1
Streptococcus_agalactiae_ILRI112 1
Streptococcus_agalactiae_ILRI005 1
Streptococcus_agalactiae_09mas018883 1
Streptococcus_agalactiae_2-22 1
Streptococcus_agalactiae_SA20-06 1
Streptococcus_agalactiae_GD201008-001 1
Streptococcus_agalactiae_NEM316 1
Streptococcus_agalactiae_2603V/R 1
Streptococcus_suis_T15 1
Streptococcus_suis_TL13 1
Streptococcus_suis_SC070731 1
Streptococcus_suis_S735 1
Streptococcus_suis_ST3 1
Streptococcus_suis_D9 1
Streptococcus_suis_SS12 1
Streptococcus_suis_D12 1
Streptococcus_suis_ST1 1
Streptococcus_suis_A7 1
Streptococcus_suis_JS14 1
Streptococcus_suis_BM407 1
Streptococcus_suis_SC84 1
Streptococcus_suis_98HAH33 1
Paenibacillus_sp._Y412MC10 0
Paenibacillus_mucilaginosus_KNP414 2
Paenibacillus_mucilaginosus_K02 3
Listeria_monocytogenes_EGD_sequence 2
Listeria_monocytogenes_serotype_4b_str._LL195 2
Listeria_monocytogenes_07PF0776 2
Listeria_monocytogenes_M7 1
Listeria_monocytogenes_J1-220 2
Listeria_monocytogenes_J1816 2
Listeria_monocytogenes_SLCC2376 2
Listeria_monocytogenes_SLCC5850 2
Listeria_monocytogenes_ATCC_19117 2
Listeria_monocytogenes_L312 2
Listeria_monocytogenes_SLCC2479 2
Listeria_monocytogenes_SLCC7179 1
Listeria_monocytogenes_SLCC2540 2
Listeria_monocytogenes_SLCC2378 2
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 2
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 2
Listeria_monocytogenes_serotype_7_str._SLCC2482 2
Listeria_monocytogenes_08-5578 2
Listeria_monocytogenes_08-5923 2
Listeria_monocytogenes_L99 1
Listeria_monocytogenes_HCC23 1
Listeria_monocytogenes_10403S 2
Listeria_monocytogenes_J0161 1
Listeria_monocytogenes_Finland_1998 1
Listeria_monocytogenes_FSL_R2-561 2
Listeria_monocytogenes_serotype_4b_str._F2365 2
Listeria_monocytogenes_EGD-e 2
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 3
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 3
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 2
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 3
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 3
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 3
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 2
Bacillus_amyloliquefaciens_LFB112 2
Bacillus_amyloliquefaciens_CC178 3
Bacillus_amyloliquefaciens_Y2 3
Bacillus_amyloliquefaciens_IT-45 2
Bacillus_amyloliquefaciens_XH7 2
Bacillus_amyloliquefaciens_LL3 2
Bacillus_amyloliquefaciens_TA208 2
Bacillus_amyloliquefaciens_DSM_7 2
Bacillus_licheniformis_9945A 2
Bacillus_subtilis_PY79 1
Bacillus_subtilis_XF-1 1
Bacillus_subtilis_QB928 1
Bacillus_subtilis_BSn5 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 2
Bacillus_subtilis_subsp._spizizenii_str._W23 2
Bacillus_subtilis_subsp._natto_BEST195 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1
Bacillus_infantis_NRRL_B-14911 0
Bacillus_megaterium_WSH-002 1
Bacillus_megaterium_QM_B1551 1
Staphylococcus_pseudintermedius_ED99 1
Staphylococcus_lugdunensis_N920143 1
Staphylococcus_epidermidis_ATCC_12228 1
Staphylococcus_aureus_CA-347 1
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 1
Chlorobium_phaeobacteroides_BS1 1
Salinibacter_ruber_DSM_13855 2
Echinicola_vietnamensis_DSM_17526 3
Prevotella_sp._oral_taxon_299_str._F0039 1
Prevotella_dentalis_DSM_3688 1
Porphyromonas_gingivalis_TDC60 1
Porphyromonas_gingivalis_W83 1
Alistipes_shahii_WAL_8301 5
Bacteroides_xylanisolvens_XB1A 1
Bacteroides_fragilis_638R 1
Bacteroides_fragilis_NCTC_9343 1
Singulisphaera_acidiphila_DSM_18658 2
Treponema_pedis_str._T_A4 1
Sorangium_cellulosum_So0157-2 4
Anaeromyxobacter_sp._K 2
Anaeromyxobacter_dehalogenans_2CP-C 2
Myxococcus_stipitatus_DSM_14675 3
Ralstonia_pickettii_12J 1
Ralstonia_solanacearum_FQY_4 2
Ralstonia_solanacearum_Po82 1
Ralstonia_solanacearum_PSI07 2
Ralstonia_solanacearum_CMR15 1
Ralstonia_solanacearum_GMI1000 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 1
Variovorax_paradoxus_B4 1
Variovorax_paradoxus_EPS 0
Bordetella_bronchiseptica_MO149 1
Bordetella_bronchiseptica_253 1
Nitrosomonas_sp._AL212 1
Caulobacter_crescentus_CB15 1
Rhodobacter_sphaeroides_KD131 1
Paracoccus_aminophilus_JCM_7686 0
Gluconacetobacter_diazotrophicus_PAl_5 1
Anaplasma_marginale_str._Dawn 1
Methylobacterium_extorquens_DM4 0
Sinorhizobium_meliloti_2011 1
Sinorhizobium_meliloti_GR4 1
Sinorhizobium_meliloti_Rm41 1
Sinorhizobium_meliloti_BL225C 1
Sinorhizobium_meliloti_1021 1
Rhizobium_etli_CFN_42 1
Rhizobium_etli_bv._mimosae_str._Mim1 2
Mesorhizobium_australicum_WSM2073 1
Rhodopseudomonas_palustris_DX-1 0
Rhodopseudomonas_palustris_TIE-1 2
Rhodopseudomonas_palustris_HaA2 1
Rhodopseudomonas_palustris_BisB5 3
Rhodopseudomonas_palustris_BisB18 1
Rhodopseudomonas_palustris_CGA009 1
Bradyrhizobium_sp._BTAi1 1
Bradyrhizobium_oligotrophicum_S58 1
Bradyrhizobium_japonicum_USDA_6 1
Vibrio_sp._EJY3 1
Vibrio_parahaemolyticus_BB22OP 1
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 1
Idiomarina_loihiensis_GSL_199 2
Shewanella_sp._W3-18-1 1
Shewanella_sp._ANA-3 2
Shewanella_baltica_BA175 1
Shewanella_baltica_OS678 1
Shewanella_baltica_OS117 1
Shewanella_baltica_OS223 1
Shewanella_baltica_OS195 1
Shewanella_baltica_OS155 1
Shewanella_sp._MR-7 1
Shewanella_putrefaciens_200 1
Glaciecola_psychrophila_170 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 2
Alteromonas_macleodii_str._'Ionian_Sea_U8' 1
Alteromonas_macleodii_str._'Ionian_Sea_U7' 2
Alteromonas_macleodii_str._'Ionian_Sea_U4' 3
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 2
Alteromonas_macleodii_str._'English_Channel_615' 1
Alteromonas_macleodii_AltDE1 1
Alteromonas_macleodii_str._'English_Channel_673' 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1
Alteromonas_macleodii_str._'Black_Sea_11' 1
Alteromonas_macleodii_ATCC_27126 1
Alcanivorax_dieselolei_B5 3
Thalassolituus_oleivorans_MIL-1 1
Stenotrophomonas_maltophilia_D457 1
Stenotrophomonas_maltophilia_JV3 1
Stenotrophomonas_maltophilia_R551-3 1
Xanthomonas_citri_subsp._citri_Aw12879 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1
Xanthomonas_axonopodis_pv._citrumelo_F1 1
Xanthomonas_axonopodis_Xac29-1 1
Xanthomonas_oryzae_pv._oryzicola_BLS256 1
Xanthomonas_campestris_pv._raphani_756C 2
Xanthomonas_campestris_pv._campestris_str._8004 2
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 2
Coxiella_burnetii_RSA_331 1
Rahnella_aquatilis_HX2 1
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1
Erwinia_pyrifoliae_DSM_12163 1
Enterobacter_cloacae_SCF1 1
Azotobacter_vinelandii_CA6 1
Azotobacter_vinelandii_CA 1
Pseudomonas_syringae_pv._phaseolicola_1448A 1
Pseudomonas_syringae_pv._syringae_B728a 1
Pseudomonas_monteilii_SB3101 1
Pseudomonas_monteilii_SB3078 1
Pseudomonas_putida_H8234 1
Pseudomonas_putida_HB3267 1
Pseudomonas_putida_NBRC_14164 1
Pseudomonas_putida_S16 1
Pseudomonas_putida_BIRD-1 1
Pseudomonas_putida_W619 1
Pseudomonas_putida_ND6 1
Pseudomonas_putida_KT2440 1
Pseudomonas_putida_GB-1 1
Pseudomonas_protegens_CHA0 1
Pseudomonas_resinovorans_NBRC_106553 1
Pseudomonas_mendocina_NK-01 1
Pseudomonas_aeruginosa_MTB-1 1
Pseudomonas_aeruginosa_B136-33 1
Pseudomonas_aeruginosa_NCGM2.S1 1
Pseudomonas_aeruginosa_LESB58 1
Pseudomonas_aeruginosa_PA7 1
Acinetobacter_genomosp._13TU__RUH2624 1
Acinetobacter_sp.__SH024 1
Acinetobacter_calcoaceticus_ruh2202 1
Acinetobacter_baumannii_ZW85-1 1
Acinetobacter_baumannii_TYTH-1 1
Acinetobacter_baumannii_BJAB0868 1
Acinetobacter_baumannii_BJAB0715 1
Acinetobacter_baumannii_BJAB07104 1
Acinetobacter_baumannii_TCDC-AB0715 1
Acinetobacter_baumannii_D1279779 1
Acinetobacter_baumannii_MDR-TJ 1
Acinetobacter_baumannii_1656-2 1
Acinetobacter_baumannii__ATCC_19606 1
Acinetobacter_baumannii_AB307-0294 1
Acinetobacter_baumannii_AYE 1
Acinetobacter_baumannii_SDF 1
Acinetobacter_baumannii_MDR-ZJ06 1
Acinetobacter_baumannii_AB0057 1
Acinetobacter_baumannii_ACICU 1
Acinetobacter_junii__SH205 1
Acinetobacter_johnsonii__SH046 1
Acinetobacter_lwoffii__SH145 1
Candidatus_Nitrososphaera_gargensis_Ga9.2 1
Aeropyrum_camini_SY1_=_JCM_12091 1
Thermococcus_sp._AM4 1
Thermococcus_sp._CL1 1
Thermococcus_litoralis_DSM_5473 1
Candidatus_Methanomethylophilus_alvus_Mx1201 1
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 1
Natrinema_pellirubrum_DSM_15624 1
Haloquadratum_walsbyi_C23 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   4
Pan_troglodytes_69_2.1.4   (Chimpanzee)   4
Gorilla_gorilla_69_3.1   (Western gorilla)   5
Pongo_abelii_69_2   (Sumatran orangutan)   2
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   4
Macaca_mulatta_69_1   (Rhesus monkey)   4
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   4
Otolemur_garnettii_69_3   (Small-eared galago)   4
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Rattus_norvegicus_69_3.4   (Norway rat)   6
Mus_musculus_69_38   (House mouse)   5
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   3
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   2
Cavia_porcellus_69_3   (Domestic guinea pig)   3
Oryctolagus_cuniculus_69_2   (Rabbit)   4
Ochotona_princeps_69   (American pika)   3
Tupaia_belangeri_69   (Northern tree shrew)   2
Sus_scrofa_69_10.2   (Pig)   4
Bos_taurus_69_3.1   (Cattle)   4
Vicugna_pacos_69_1   (Alpaca)   5
Tursiops_truncatus_69_1   (Bottlenose dolphin)   4
Mustela_putorius_furo_69_1.0   (Domestic ferret)   4
Ailuropoda_melanoleuca_69_1   (Giant panda)   5
Canis_familiaris_69_3.1   (Dog)   5
Equus_caballus_69_2   (Horse)   3
Myotis_lucifugus_69_2.0   (Little brown bat)   4
Pteropus_vampyrus_69_1   (Large flying fox)   4
Sorex_araneus_69_1   (European shrew)   3
Erinaceus_europaeus_69   (Western European hedgehog)   3
Procavia_capensis_69_1   (Cape rock hyrax)   2
Loxodonta_africana_69_3   (African savanna elephant)   4
Echinops_telfairi_69   (Small Madagascar hedgehog)   2
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   2
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   3
Macropus_eugenii_69_1.0   (Tammar wallaby)   2
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   5
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   7
Ornithorhynchus_anatinus_69_5   (Platypus)   2
Petromyzon_marinus_69_7.0   (Sea lamprey)   2
Meleagris_gallopavo_69_2   (Turkey)   4
Gallus_gallus_69_2   (Chicken)   3
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   3
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   5
Anolis_carolinensis_69_2.0   (Green anole)   4
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   5
Latimeria_chalumnae_69_1   (Coelacanth)   5
Gadus_morhua_69_1   (Atlantic cod)   3
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   6
Takifugu_rubripes_69_4   (Torafugu)   7
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   7
Oryzias_latipes_69_1   (Japanese medaka)   5
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   6
Oreochromis_niloticus_69_1.0   (Nile tilapia)   8
Danio_rerio_69_9   (Zebrafish)   8
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   4
Ciona_intestinalis_69   (Vase tunicate)   2
Drosophila_melanogaster_69_5   (Fruit fly)   6
Caenorhabditis_elegans_69_215   (Roundworm)   6
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   5
Arabidopsis_thaliana_10   (Thale cress)   7

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   11
Homo_sapiens__(NCBI_version)   (Human)   7
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   5
Loa_loa_v3.3_(Request)   (Eye worm)   6
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   3
Lotus_japonicus__(Early_assembly) 3
Malus_x_domestica_(Duplicate)   (Apple)   13
Ricinus_communis__(Early_assembly)   (Castor bean)   5
Nicotiana_benthamiana_0.4.4_(Early_draft) 9
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   3
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   3
Phoenix_dactylifera__(Early_draft)   (Date palm)   3
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1
NCBI_plasmid_sequences_(Plasmids) 34
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 13
NCBI_viral_sequences_(Viral) 1
Protein_Data_Bank_(all_PDB_sequenc) 16
PDB_chains_(SCOP_1.75)_(PDB) 1
TargetDB__(Targets) 70
Protozoadb_2010_08_(Protozoadb) 222
STRING_v9.0.5_(STRING) 1067
Uniprot_2018_03_genome 103225
UniProt__viral_sequences_(Viral) 0
NCBI_2017_08_genome 35561

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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